Pre_GI: OUP Neighbours

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Query: NC_006510:1921541 Geobacillus kaustophilus HTA426, complete genome

D: 30.4934

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.

Number of Neighbours: 96




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010117:1461502*Coxiella burnetii RSA 331, complete genome75.4442 %Subject ←→ Query25.1338
NC_002971:1379567*Coxiella burnetii RSA 493, complete genome75.3707 %Subject ←→ Query25.3769
NC_013411:2951559Geobacillus sp. Y412MC61, complete genome84.4026 %Subject ←→ Query26.0731
NC_014915:727631*Geobacillus sp. Y412MC52 chromosome, complete genome76.0417 %Subject ←→ Query27.4562
NC_016023:1538000*Bacillus coagulans 36D1 chromosome, complete genome78.3701 %Subject ←→ Query27.6447
NC_016023:1839503Bacillus coagulans 36D1 chromosome, complete genome78.1801 %Subject ←→ Query27.7663
NC_013411:2739989Geobacillus sp. Y412MC61, complete genome86.2684 %Subject ←→ Query28.6055
NC_014915:1331459*Geobacillus sp. Y412MC52 chromosome, complete genome81.3388 %Subject ←→ Query29.3197
NC_006510:2110430Geobacillus kaustophilus HTA426, complete genome83.8235 %Subject ←→ Query29.4869
NC_013411:1587689*Geobacillus sp. Y412MC61, complete genome76.4553 %Subject ←→ Query29.6612
NC_013406:4023367Paenibacillus sp. Y412MC10 chromosome, complete genome77.7053 %Subject ←→ Query29.6966
NC_006510:746814Geobacillus kaustophilus HTA426, complete genome78.4681 %Subject ←→ Query29.7149
NC_013411:2191514*Geobacillus sp. Y412MC61, complete genome81.3542 %Subject ←→ Query29.8119
NC_002570:1220180Bacillus halodurans C-125, complete genome77.9412 %Subject ←→ Query30.258
NC_006510:1901954Geobacillus kaustophilus HTA426, complete genome83.0974 %Subject ←→ Query30.262
NC_011528:386417*Coxiella burnetii CbuK_Q154, complete genome75.7384 %Subject ←→ Query30.2955
NC_014915:308056*Geobacillus sp. Y412MC52 chromosome, complete genome80.1072 %Subject ←→ Query30.3414
NC_013411:681907Geobacillus sp. Y412MC61, complete genome75.5055 %Subject ←→ Query30.5897
NC_013411:1168049*Geobacillus sp. Y412MC61, complete genome80.1072 %Subject ←→ Query30.6232
NC_006510:795973Geobacillus kaustophilus HTA426, complete genome78.5417 %Subject ←→ Query30.7393
NC_014915:1880748Geobacillus sp. Y412MC52 chromosome, complete genome85.1593 %Subject ←→ Query30.9399
NC_006510:1995916Geobacillus kaustophilus HTA426, complete genome86.8474 %Subject ←→ Query31.0693
NC_006510:1501487Geobacillus kaustophilus HTA426, complete genome85.383 %Subject ←→ Query31.1681
NC_012914:1824955Paenibacillus sp. JDR-2, complete genome78.9706 %Subject ←→ Query31.1862
NC_013411:334549Geobacillus sp. Y412MC61, complete genome78.8143 %Subject ←→ Query31.2318
NC_013406:4000518Paenibacillus sp. Y412MC10 chromosome, complete genome78.4252 %Subject ←→ Query31.2804
NC_006322:2886404*Bacillus licheniformis ATCC 14580, complete genome77.1078 %Subject ←→ Query31.3686
NC_013406:2207520*Paenibacillus sp. Y412MC10 chromosome, complete genome75.0429 %Subject ←→ Query31.481
NC_002570:3911153*Bacillus halodurans C-125, complete genome81.0784 %Subject ←→ Query31.5792
NC_010117:285230*Coxiella burnetii RSA 331, complete genome75.5821 %Subject ←→ Query31.6756
NC_006510:2778777Geobacillus kaustophilus HTA426, complete genome82.0803 %Subject ←→ Query31.9066
NC_006322:4048990Bacillus licheniformis ATCC 14580, complete genome77.0006 %Subject ←→ Query32.0525
NC_015975:441580*Lactobacillus ruminis ATCC 27782 chromosome, complete genome75.5821 %Subject ←→ Query32.2212
NC_016023:1725294*Bacillus coagulans 36D1 chromosome, complete genome76.057 %Subject ←→ Query32.4295
NC_013406:7092510*Paenibacillus sp. Y412MC10 chromosome, complete genome78.1097 %Subject ←→ Query32.5359
NC_013411:2767400Geobacillus sp. Y412MC61, complete genome87.549 %Subject ←→ Query32.8925
NC_014915:2387639Geobacillus sp. Y412MC52 chromosome, complete genome80.4351 %Subject ←→ Query32.928
NC_006510:372826*Geobacillus kaustophilus HTA426, complete genome84.8192 %Subject ←→ Query33.0492
NC_002570:2616899*Bacillus halodurans C-125, complete genome78.2047 %Subject ←→ Query33.1059
NC_015975:1936504*Lactobacillus ruminis ATCC 27782 chromosome, complete genome76.5502 %Subject ←→ Query33.1165
NC_002570:367000Bacillus halodurans C-125, complete genome75.1593 %Subject ←→ Query33.462
NC_011567:75306*Anoxybacillus flavithermus WK1, complete genome75.5974 %Subject ←→ Query33.4752
NC_012793:3243727Geobacillus sp. WCH70, complete genome81.008 %Subject ←→ Query33.5494
NC_013406:3926531Paenibacillus sp. Y412MC10 chromosome, complete genome75.6924 %Subject ←→ Query33.6637
NC_014915:2092678Geobacillus sp. Y412MC52 chromosome, complete genome86.6575 %Subject ←→ Query33.7161
NC_014915:1376035Geobacillus sp. Y412MC52 chromosome, complete genome84.7855 %Subject ←→ Query33.9451
NC_009727:1822877*Coxiella burnetii Dugway 7E9-12, complete genome75.5729 %Subject ←→ Query34.0366
NC_013406:3874157Paenibacillus sp. Y412MC10 chromosome, complete genome79.5037 %Subject ←→ Query34.0467
NC_013406:3650300Paenibacillus sp. Y412MC10 chromosome, complete genome79.8315 %Subject ←→ Query34.0613
NC_010556:691498*Exiguobacterium sibiricum 255-15, complete genome75.7016 %Subject ←→ Query34.0933
NC_013411:735838Geobacillus sp. Y412MC61, complete genome80.864 %Subject ←→ Query34.1271
NC_013406:3975512*Paenibacillus sp. Y412MC10 chromosome, complete genome77.1232 %Subject ←→ Query34.1926
NC_002971:211331*Coxiella burnetii RSA 493, complete genome76.8934 %Subject ←→ Query34.2373
NC_013406:347995Paenibacillus sp. Y412MC10 chromosome, complete genome76.3634 %Subject ←→ Query34.3654
NC_011527:1688447*Coxiella burnetii CbuG_Q212, complete genome75.3217 %Subject ←→ Query34.3676
NC_013406:6052913Paenibacillus sp. Y412MC10 chromosome, complete genome75.5944 %Subject ←→ Query34.4844
NC_012914:2360989Paenibacillus sp. JDR-2, complete genome76.3358 %Subject ←→ Query34.4844
NC_014915:2900209Geobacillus sp. Y412MC52 chromosome, complete genome75.2543 %Subject ←→ Query34.6121
NC_006510:1446490Geobacillus kaustophilus HTA426, complete genome84.4301 %Subject ←→ Query34.7114
NC_014915:1080793Geobacillus sp. Y412MC52 chromosome, complete genome77.788 %Subject ←→ Query34.7963
NC_013411:2236166Geobacillus sp. Y412MC61, complete genome84.7641 %Subject ←→ Query34.9976
NC_012914:4238142Paenibacillus sp. JDR-2, complete genome77.8401 %Subject ←→ Query35.0494
NC_015690:1348691*Paenibacillus mucilaginosus KNP414 chromosome, complete genome76.7126 %Subject ←→ Query35.1991
NC_014915:332784Geobacillus sp. Y412MC52 chromosome, complete genome79.3168 %Subject ←→ Query35.3478
NC_013411:1941762Geobacillus sp. Y412MC61, complete genome78.2414 %Subject ←→ Query35.4059
NC_013411:597235Geobacillus sp. Y412MC61, complete genome81.7279 %Subject ←→ Query35.813
NC_013411:2975364Geobacillus sp. Y412MC61, complete genome84.4761 %Subject ←→ Query35.9085
NC_014915:1909275Geobacillus sp. Y412MC52 chromosome, complete genome87.2794 %Subject ←→ Query36.0595
NC_015975:267994*Lactobacillus ruminis ATCC 27782 chromosome, complete genome75.5637 %Subject ←→ Query36.1625
NC_011567:204772*Anoxybacillus flavithermus WK1, complete genome76.1949 %Subject ←→ Query36.2332
NC_014915:2963500Geobacillus sp. Y412MC52 chromosome, complete genome82.8493 %Subject ←→ Query36.3336
NC_014915:3259440Geobacillus sp. Y412MC52 chromosome, complete genome85.6311 %Subject ←→ Query36.3561
NC_015757:70790*Sulfobacillus acidophilus TPY chromosome, complete genome75.1624 %Subject ←→ Query36.3664
NC_016023:1083826Bacillus coagulans 36D1 chromosome, complete genome76.636 %Subject ←→ Query36.5698
NC_006510:2044347Geobacillus kaustophilus HTA426, complete genome84.5558 %Subject ←→ Query36.7248
NC_013406:6568273*Paenibacillus sp. Y412MC10 chromosome, complete genome76.3848 %Subject ←→ Query36.8797
NC_013411:284461Geobacillus sp. Y412MC61, complete genome85.5821 %Subject ←→ Query36.9212
NC_006510:310212*Geobacillus kaustophilus HTA426, complete genome82.0466 %Subject ←→ Query37.0244
NC_013411:3201331*Geobacillus sp. Y412MC61, complete genome77.3162 %Subject ←→ Query37.0683
NC_002570:2649759*Bacillus halodurans C-125, complete genome77.7237 %Subject ←→ Query37.3257
NC_014915:3207300*Geobacillus sp. Y412MC52 chromosome, complete genome77.3162 %Subject ←→ Query37.427
NC_013406:5954472Paenibacillus sp. Y412MC10 chromosome, complete genome76.3419 %Subject ←→ Query37.4529
NC_013199:2536705*Lactobacillus rhamnosus Lc 705, complete genome75.0337 %Subject ←→ Query37.5527
NC_015572:4916430Methylomonas methanica MC09 chromosome, complete genome75.1899 %Subject ←→ Query37.6362
NC_014915:2427000Geobacillus sp. Y412MC52 chromosome, complete genome86.0172 %Subject ←→ Query38.0805
NC_006510:1400000*Geobacillus kaustophilus HTA426, complete genome84.7763 %Subject ←→ Query38.8011
NC_006510:1014500*Geobacillus kaustophilus HTA426, complete genome84.1483 %Subject ←→ Query39.7198
NC_013411:1454465Geobacillus sp. Y412MC61, complete genome77.4694 %Subject ←→ Query39.8118
NC_015690:4361000Paenibacillus mucilaginosus KNP414 chromosome, complete genome79.0472 %Subject ← Query40.7943
NC_013406:3400114Paenibacillus sp. Y412MC10 chromosome, complete genome76.9148 %Subject ← Query41.0068
NC_014915:595569Geobacillus sp. Y412MC52 chromosome, complete genome76.8658 %Subject ← Query41.0221
NC_006510:1731939*Geobacillus kaustophilus HTA426, complete genome79.1851 %Subject ← Query41.4725
NC_015437:697051*Selenomonas sputigena ATCC 35185 chromosome, complete genome76.1366 %Subject ← Query41.6465
NC_015690:3941113*Paenibacillus mucilaginosus KNP414 chromosome, complete genome77.8156 %Subject ← Query44.4181
NC_010337:803748Heliobacterium modesticaldum Ice1, complete genome79.1299 %Subject ← Query48.9344
NC_010337:2793667*Heliobacterium modesticaldum Ice1, complete genome76.0876 %Subject ← Query50.1502