Pre_GI: BLASTN Hits

Some Help

Query: NC_020207:1872000 Enterococcus faecium NRRL B-2354, complete genome

Start: 1872000, End: 1902099, Length: 30100

Host Lineage: Enterococcus faecium; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen causes a range of infections similar to those observed with Enterococcus faecalis, including urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart). Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains and has led to the rise of vancomycin-resistant Staphylococcus aureus strains due to the horizontal transfer of Enterococcus antibiotic resistance genes. Little is known about the virulence mechanisms in this organism, but the genome does encode an esp gene for the surface adhesin. Vancomycin resistant isolates are more typically Enterococcus faecium than Enterococcus faecalis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020207:11700001170000118959919600Enterococcus faecium NRRL B-2354, complete genome01094BLASTN svgBLASTP svg
NC_020164:23293402329340234976120422Staphylococcus warneri SG1, complete genome7e-20107BLASTN svgBLASTP svg
NC_004668:241352*24135226701725666Enterococcus faecalis V583, complete genome4e-18101BLASTN svgBLASTP svg
NC_007929:473500*47350049963926140Lactobacillus salivarius subsp. salivarius UCC118, complete genome4e-18101BLASTN svgBLASTP svg
NC_008497:1111891*1111891114836436474Lactobacillus brevis ATCC 367, complete genome4e-18101BLASTN svgBLASTP svg
NC_008525:664500*66450068827523776Pediococcus pentosaceus ATCC 25745, complete genome4e-18101BLASTN svgBLASTP svg
NC_014335:32885003288500330729218793Bacillus cereus biovar anthracis str. CI chromosome, complete4e-18101BLASTN svgBLASTP svg
NC_014829:72200072200074017718178Bacillus cellulosilyticus DSM 2522 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_014976:1174430*1174430119919524766Bacillus subtilis BSn5 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_015428:700479*70047972176721289Lactobacillus buchneri NRRL B-30929 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_015975:1493636*1493636151659922964Lactobacillus ruminis ATCC 27782 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_003923:27946862794686281805223367Staphylococcus aureus subsp. aureus MW2, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_002953:27730002773000279475321754Staphylococcus aureus subsp. aureus MSSA476, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_010080:445398*44539846977024373Lactobacillus helveticus DPC 4571, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_009513:618000*61800064445826459Lactobacillus reuteri F275, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008530:1551356*1551356158801736662Lactobacillus gasseri ATCC 33323, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008526:817628*81762883659918972Lactobacillus casei ATCC 334, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_007576:435713*43571345815822446Lactobacillus sakei subsp. sakei 23K, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_005362:1651767*1651767169076238996Lactobacillus johnsonii NCC 533, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_010999:880878*88087890041319536Lactobacillus casei, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_011567:388358*38835841678028423Anoxybacillus flavithermus WK1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_014106:419511*41951145680837298Lactobacillus crispatus ST1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_014334:769205*76920579363824434Lactobacillus casei str. Zhang chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015214:437733*43773348259944867Lactobacillus acidophilus 30SC chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015602:117939*11793915324635308Lactobacillus kefiranofaciens ZW3 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015697:1814128*1814128185559941472Lactobacillus reuteri SD2112 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_018528:446610*44661047359926990Lactobacillus helveticus R0052 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
UCMB5137:18349991834999185304118043Bacillus atrophaeus UCMB-51374e-1591.7BLASTN svgBLASTP svg
NC_010516:35931035931038266123352Clostridium botulinum B1 str. Okra, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014724:439594*43959448564446051Lactobacillus amylovorus GRL 1112 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006814:403723*40372344563241910Lactobacillus acidophilus NCFM, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021171:16619231661923168490422982Bacillus sp. 1NLA3E, complete genome1e-1283.8BLASTN svgBLASTP svg
CP002207:18945001894500191721322714Bacillus atrophaeus 1942, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_012121:1444633*1444633146884124209Staphylococcus carnosus subsp. carnosus TM300, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_002952:88450088450090389519396Staphylococcus aureus subsp. aureus MRSA252, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_002745:84084884084886459823751Staphylococcus aureus subsp. aureus N315, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015978:996933*996933102184824916Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete2e-1179.8BLASTN svgBLASTP svg
NC_013199:811929*81192983409922171Lactobacillus rhamnosus Lc 705, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_013198:813830*81383083545121622Lactobacillus rhamnosus GG, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014614:2359046*2359046238727828233Clostridium sticklandii, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012491:4231469*4231469425472523257Brevibacillus brevis NBRC 100599, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_011774:115228*11522815499939772Bacillus cereus G9842 plasmid pG9842_140, complete sequence9e-1073.8BLASTN svgBLASTP svg
NC_008505:36638*366386139024753Lactococcus lactis subsp. cremoris SK11 plasmid 3, complete6e-0867.9BLASTN svgBLASTP svg
NC_014376:693820*69382071739923580Clostridium saccharolyticum WM1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012781:751757*75175777413422378Eubacterium rectale ATCC 33656, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012778:403962*40396242480720846Eubacterium eligens ATCC 27750, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008593:22818962281896230590024005Clostridium novyi NT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004668:1427674*1427674144570618033Enterococcus faecalis V583, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011126:1345984*1345984136835222369Hydrogenobaculum sp. Y04AAS1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014833:1539678*1539678155896019283Ruminococcus albus 7 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014833:3667748*3667748368799920252Ruminococcus albus 7 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015557:1333158*1333158135835525198Hydrogenobaculum sp. 3684 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_020411:1333352*1333352135854925198Hydrogenobaculum sp. HO, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015760:8914*89142721018297Streptococcus salivarius CCHSS3, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_006449:5046*50463138626341Streptococcus thermophilus CNRZ1066, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_006448:5046*50463135826313Streptococcus thermophilus LMG 18311, complete genome4e-0661.9BLASTN svgBLASTP svg