Pre_GI: BLASTP Hits

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Query: NC_011353:3805819:3828362 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Start: 3828362, End: 3828556, Length: 195

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002655:3769643:379127037912703791506237Escherichia coli O157:H7 EDL933, complete genomeputative integral membrane protein-component of typeIII secretion apparatus8e-29125
NC_010468:906957:917613917613918380768Escherichia coli ATCC 8739, complete genometype III secretion protein SpaR/YscT/HrcT1e-28125
NC_009800:2995958:302064530206453021412768Escherichia coli HS, complete genometype III secretion apparatus protein EpaR1e-28125
CU928145:3196173:321850832185083219275768Escherichia coli 55989 chromosome, complete genomeputative Type III secretion protein EpaR1e-28125
NC_011748:3196173:321850832185083219275768Escherichia coli 55989, complete genomeputative Type III secretion protein EpaR1e-28125
CP002516:903241:913892913892914659768Escherichia coli KO11, complete genometype III secretion protein SpaR/YscT/HrcT7e-28122
CP002185:3167738:319141731914173192184768Escherichia coli W, complete genometype III secretion system protein7e-28122
NC_011415:3217796:324009432400943240861768Escherichia coli SE11 chromosome, complete genomeputative type III secretion protein7e-28122
NC_016902:903241:913892913892914659768Escherichia coli KO11FL chromosome, complete genometype III secretion protein SpaR/YscT/HrcT7e-28122
NC_013361:3867558:388985638898563890623768Escherichia coli O26:H11 str. 11368 chromosome, complete genometype III secretion protein EpaR5e-28122
NC_013364:3552284:357458735745873575354768Escherichia coli O111:H- str. 11128, complete genometype III secretion protein EpaR5e-28122
NC_011751:3285646:330819233081923308959768Escherichia coli UMN026 chromosome, complete genomeputative type III secretion protein EpaR2e-27120
NC_009801:3175714:319800931980093198776768Escherichia coli E24377A, complete genometype III secretion apparatus protein EpaR4e-27119
CU928160:3030324:305262330526233053390768Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion protein EpaR4e-27119
AP010958:3474077:349637434963743497141768Escherichia coli O103:H2 str. 12009 DNA, complete genometype III secretion protein EpaR4e-27119
NC_011741:3030324:305262330526233053390768Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion protein EpaR4e-27119
NC_013353:3474077:349637434963743497141768Escherichia coli O103:H2 str. 12009, complete genometype III secretion protein EpaR4e-27119
NC_011080:2982346:300909430090943009885792Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein SpaR/YscT/HrcT3e-0960.8
NC_006511:2819128:284712628471262847917792Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsecretory protein (associated with virulence)3e-0960.8
NC_011147:2814664:284266228426622843453792Salmonella enterica subsp. enterica serovar Paratyphi A strvirulence secretory protein3e-0960.8
NC_011205:3050235:307698730769873077778792Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein SpaR/YscT/HrcT3e-0960.8
NC_011274:2881306:290805429080542908845792Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91virulence associated secretory protein3e-0960.8
NC_011294:2890500:291725029172502918041792Salmonella enterica subsp. enterica serovar Enteritidis strsecretory protein3e-0960.8
NC_016831:2867766:289451428945142895305792Salmonella enterica subsp. enterica serovar Gallinarum/pullorumsecretory protein (associated with virulence)3e-0960.8
NC_006905:2960260:298611829861182986909792Salmonella enterica subsp. enterica serovar Choleraesuis strsurface presentation of antigens; secretory proteins3e-0960.8
NC_011149:2912219:294111629411162941907792Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein SpaR/YscT/HrcT3e-0960.5
NC_003197:3005842:303259030325903033381792Salmonella typhimurium LT2, complete genomeneedle complex export protein3e-0960.5
NC_010102:2967464:299557229955722996363792Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0960.5
NC_012125:2938519:296650129665012967292792Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence associated secretory protein3e-0960.5
NC_016810:3028421:305516630551663055957792Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system secretory apparatus3e-0960.5
NC_016856:3026426:305282730528273053618792Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex export protein3e-0960.5
NC_016857:3028421:305516630551663055957792Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex export protein3e-0960.5
NC_016860:3029272:305602030560203056811792Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus protein SpaR/YscT/HrcT3e-0960.5
NC_016863:2974333:300108030010803001871792Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex export protein3e-0960.5
NC_017046:3027161:305390630539063054697792Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system secretory apparatus3e-0960.5
NC_011094:2913500:293978629397862940577792Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein SpaR/YscT/HrcT3e-0960.5
NC_015761:2726000:275218927521892752980792Salmonella bongori NCTC 12419, complete genomevirulence associated secretory protein5e-0959.7
NC_016832:2829767:285774628577462858537792Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Surface presentation of antigens protein spaR8e-0958.9
NC_004631:2842453:287044728704472871238792Salmonella enterica subsp. enterica serovar Typhi Ty2, completevirulence-associated secretory protein8e-0958.9
NC_003198:2856596:288459028845902885381792Salmonella enterica subsp. enterica serovar Typhi str. CT18,secretory protein (associated with virulence)8e-0958.9