Pre_GI: BLASTP Hits

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Query: NC_011205:3078732:3090967 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 3090967, End: 3091107, Length: 141

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:3009760:302273430227343022874141Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-1993.6
NC_006905:2987863:300011930001193000295177Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein1e-1788.6
NC_012125:2938519:298050129805012980677177Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein1e-1788.6
NC_016856:3026426:306845630684563068632177Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-1788.6
NC_016863:2974333:301670930167093016897189Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-1788.6
NC_016857:3028421:307079530707953070947153Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-1788.6
NC_017046:3027161:306953530695353069687153Salmonella enterica subsp. enterica serovar Typhimurium str. 7981e-1788.6
NC_016860:3029272:307164930716493071789141Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein1e-1788.2
NC_016831:2867766:290850529085052908645141Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative cytoplasmic protein3e-1787.4
NC_011080:2982346:302472330247233025160438Salmonella enterica subsp. enterica serovar Newport str. SL254,probable transposase for transposon5e-1786.7
NC_010102:2967464:301121230112123011388177Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-1786.7
NC_011149:2912219:295664929566492956789141Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-1786.7
NC_011094:2913500:295345629534562953680225Salmonella enterica subsp. enterica serovar Schwarzengrund strtransposase1e-1582
NC_016832:2859491:287174828717482871894147Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transposase1e-1478.6
NC_007712:1712667:172109317210931722031939Sodalis glossinidius str. 'morsitans', complete genometransposase4e-1373.6
NC_007712:1893066:191195019119501912873924Sodalis glossinidius str. 'morsitans', complete genometransposase4e-1373.6
NC_007712:1954808:196808419680841969007924Sodalis glossinidius str. 'morsitans', complete genometransposase1e-1271.6
NC_007712:1262593:128007712800771280976900Sodalis glossinidius str. 'morsitans', complete genometransposase7e-1269.3
NC_013508:2130681:215414121541412155064924Edwardsiella tarda EIB202, complete genomeIS903 transposase2e-0961.2
NC_009783:1665610:166918316691831670103921Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-0960.8
NC_007712:4067500:407411440741144074980867Sodalis glossinidius str. 'morsitans', complete genometransposase3e-0960.5
NC_016944:514742:532907532907533395489Vibrio cholerae IEC224 chromosome I, complete sequencetransposase3e-0960.5
NC_012668:83641:869528695287440489Vibrio cholerae MJ-1236 chromosome 1, complete sequencetransposase3e-0960.5
NC_009783:1665610:167852716785271679447921Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-0960.5
NC_006625:1:524352436211969Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceputative transposase, IS45e-0960.1
NC_011740:4007000:401936540193654020333969Escherichia fergusonii ATCC 35469, complete genometransposase, IS903.B4e-0960.1
NC_016845:1285435:131517113151711316139969Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transposase InsC for insertion sequence IS9034e-0960.1
NC_016845:3238507:324804732480473249015969Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transposase InsC for insertion sequence IS9034e-0960.1
NC_016845:4498097:451352345135234514491969Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transposase InsC for insertion sequence IS9034e-0960.1
NC_016845:575123:586054586054587022969Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transposase InsC for insertion sequence IS9034e-0960.1
NC_004347:3437369:344041234404123441335924Shewanella oneidensis MR-1, complete genomeISSod12, transposase4e-0960.1
NC_010498:2278306:228207822820782283001924Escherichia coli SMS-3-5, complete genomeIS903 transposase6e-0959.7
NC_011283:2103500:211099221109922111915924Klebsiella pneumoniae 342 chromosome, complete genomeIS903, transposase6e-0959.7
NC_011283:2836000:287871928787192879642924Klebsiella pneumoniae 342 chromosome, complete genomeIS903, transposase6e-0959.7
NC_011283:4438500:447050644705064471429924Klebsiella pneumoniae 342 chromosome, complete genomeIS903, transposase6e-0959.7
NC_011283:5170683:517526251752625176185924Klebsiella pneumoniae 342 chromosome, complete genomeIS903, transposase6e-0959.7
NC_009999:38832:580935809359016924Shewanella baltica OS195 plasmid pS19502, complete sequencetransposase IS4 family protein6e-0959.7
NC_011663:4943179:496783949678394968762924Shewanella baltica OS223 chromosome, complete genometransposase IS4 family protein6e-0959.7
NC_009649:94871:105803105803106771969Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,IS903 transposase5e-0959.7
NC_006625:63342:765797657977547969Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceputative transposase, IS45e-0959.7
NC_015633:1702000:171285717128571713777921Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase5e-0959.7
NC_015637:325561:332888332888333808921Vibrio anguillarum 775 chromosome chromosome II, complete sequencetransposase5e-0959.7
NC_015633:338000:347226347226348146921Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase5e-0959.7
NC_009838:81913:115878115878116801924Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceIS4 transposase5e-0959.7
NC_009457:351512:364974364974365114141Vibrio cholerae O395 chromosome 2, complete sequencetransposase8e-0959.3
NC_013716:2139952:216970721697072170675969Citrobacter rodentium ICC168, complete genomeIS102 transposase6e-0959.3
NC_013716:3512950:352588535258853526853969Citrobacter rodentium ICC168, complete genomeIS102 transposase6e-0959.3
NC_013716:3708415:371318037131803714148969Citrobacter rodentium ICC168, complete genomeIS102 transposase6e-0959.3
NC_013716:3109700:312436631243663125334969Citrobacter rodentium ICC168, complete genomeIS102 transposase6e-0959.3
NC_004459:3243987:325893332589333259151219Vibrio vulnificus CMCP6 chromosome I, complete sequenceTransposase1e-0858.9
NC_009665:693478:721190721190722113924Shewanella baltica OS185 chromosome, complete genometransposase IS4 family protein9e-0958.9
NC_016445:338288:351750351750352187438Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetransposase9e-0958.9
NC_016944:859492:871270871270871707438Vibrio cholerae IEC224 chromosome I, complete sequencetransposase9e-0958.9
NC_012731:2739964:274684927468492747772924Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometransposase8e-0958.9
NC_012731:3593000:359636535963653597288924Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometransposase8e-0958.9
NC_009648:1487692:151184415118441512812969Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative transposase, IS41e-0858.5
NC_014121:1589389:160314316031431604111969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS903 transposase1e-0858.5
NC_014121:1822895:184016718401671841135969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS903 transposase1e-0858.5
NC_014121:489500:500709500709501677969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-0858.5
NC_014121:4577324:459103545910354592003969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-0858.5
NC_014121:1101093:110277211027721103740969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS903 transposase1e-0858.5
NC_014121:5000069:500927050092705010238969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-0858.5
NC_014121:1038554:105273510527351053703969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS903 transposase1e-0858.5
NC_014121:2330451:235490823549082355876969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-0858.5
NC_014121:3188928:319494331949433195911969Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase1e-0858.5
NC_009997:4091371:409715840971584098078921Shewanella baltica OS195, complete genometransposase IS4 family protein1e-0858.2
NC_009997:726840:755480755480756403924Shewanella baltica OS195, complete genometransposase IS4 family protein1e-0858.2
NC_009997:2069894:206989420698942070814921Shewanella baltica OS195, complete genometransposase IS4 family protein1e-0858.2
NC_016901:2070121:207048220704822071402921Shewanella baltica OS678 chromosome, complete genometransposase IS4 family protein1e-0858.2
NC_016901:4039335:404512240451224046042921Shewanella baltica OS678 chromosome, complete genometransposase IS4 family protein1e-0858.2
NC_016901:724000:751852751852752775924Shewanella baltica OS678 chromosome, complete genometransposase IS4 family protein1e-0858.2
NC_016602:173314:195551195551196471921Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetransposase2e-0857.8
NC_014121:4577324:459277545927754593449675Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase2e-0857.8
NC_012779:1449500:150017915001791501117939Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-0857.4
NC_014121:677799:687246687246687704459Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative transposase6e-0856.2
NC_005139:2201820:223463522346352235555921Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase2e-0754.7
NC_005139:2201820:224555622455562245942387Vibrio vulnificus YJ016 chromosome I, complete sequencetransposase2e-0754.3
NC_008150:4634695:463953546395354639792258Yersinia pestis Antiqua, complete genomehypothetical protein4e-0753.5