Pre_GI Gene

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Host: NC_004347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004347:3437369 Shewanella oneidensis MR-1, complete genome

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
343736934388351467inositol-5-monophosphate dehydrogenaseQuickGO ontologyBLASTP
343895834402951338exodeoxyribonuclease VII large subunitQuickGO ontologyBLASTP
34404123441335924ISSod12 transposaseQuickGO ontologyBLASTP
34415253442370846transcriptional regulator LysR familyQuickGO ontologyBLASTP
344249234436161125hypothetical proteinBLASTP
344375934454081650Palhistidase family proteinQuickGO ontologyBLASTP
34455063445886381cytochrome cQuickGO ontologyBLASTP
344589034473891500flavocytochrome c flavin subunitQuickGO ontologyBLASTP
344805834519213864serine protease subtilase familyQuickGO ontologyBLASTP
345192934543732445chitinase domain proteinQuickGO ontology
34545713455191621DNA-binding response regulator LuxR familyQuickGO ontologyBLASTP
345519434587093516sensor histidine kinaseQuickGO ontologyBLASTP