Pre_GI: BLASTP Hits

Some Help

Query: NC_010634:4234932:4251596 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 4251596, End: 4252282, Length: 687

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006155:4302826:432049943204994321185687Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-131468
NC_010465:429095:432489432489433175687Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein6e-131466
NC_003143:4006884:401027840102784010964687Yersinia pestis CO92, complete genomehypothetical protein4e-130463
NC_009381:222735:226120226120226806687Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-130463
NC_009708:372422:375816375816376502687Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-130463
NC_014029:3958811:396220539622053962891687Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-130463
NC_017154:3898925:390231939023193903005687Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-130463
NC_017168:1631052:163444616344461635132687Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-130463
NC_017265:4265659:428327642832764283962687Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-130463
NC_012962:293976:307169307169307816648Photorhabdus asymbiotica, complete genomehypothetical protein5e-57220
NC_005126:349658:387412387412388059648Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-56218
NC_014228:4331327:434334743433474344018672Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein (probable component of SST VI cluster)1e-53209
NC_013892:274297:282828282828283493666Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-51202
NC_011274:1094379:112128611212861122023738Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-49194
NC_011205:1186097:121299412129941213731738Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type VI secretion-associated protein3e-49194
CP002185:234719:247228247228247971744Escherichia coli W, complete genomeT6SS-associated protein6e-48190
CP002516:3863932:386393238639323864675744Escherichia coli KO11, complete genometype VI secretion-associated protein, VC_A0118 family6e-48190
NC_016822:246715:259248259248259991744Shigella sonnei 53G, complete genometype VI secretion-associated protein6e-48190
NC_016902:3863932:386393238639323864675744Escherichia coli KO11FL chromosome, complete genometype VI secretion-associated protein6e-48190
NC_015968:4117835:4141012414101241431262115Enterobacter asburiae LF7a chromosome, complete genomeSigma 54 interacting domain-containing protein5e-29127
NC_012913:1832500:184679518467951847421627Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein5e-0651.2