Pre_GI: BLASTP Hits

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Query: NC_009708:2537557:2545238 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2545238, End: 2545651, Length: 414

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:1770106:177425717742571774787531Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-29125
NC_020181:2097066:210213521021352102668534Enterobacter aerogenes EA1509E, complete genomePhage lysin1e-28124
NC_016845:1285435:130558313055831306113531Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-27121
NC_013361:1754346:175917817591781759711534Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendolysin5e-27119
NC_016845:2274500:229637722963772296907531Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-26117
NC_016612:3803130:382579838257983826328531Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative endolysin R of prophage CP-933V2e-26117
NC_012947:2366000:237782223778222378355534Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeLysozyme2e-26117
NC_012967:1403733:141753014175301418063534Escherichia coli B str. REL606 chromosome, complete genomeputative lysozyme2e-26117
NC_011740:4520373:452843745284374528970534Escherichia fergusonii ATCC 35469, complete genomeputative membrane-associated lysozyme; Qin prophage1e-25115
NC_008563:5011997:502095850209585021491534Escherichia coli APEC O1, complete genomeQin prophage; predicted lysozyme1e-25115
NC_009800:1657550:166858416685841669117534Escherichia coli HS, complete genomephage lysozyme1e-25115
NC_004431:3040953:304975430497543050287534Escherichia coli CFT073, complete genomeProbable lysozyme from lambdoid prophage Qin1e-25115
NC_011742:4962008:497096849709684971501534Escherichia coli S88 chromosome, complete genomemembrane-associated lysozyme; Qin prophage1e-25115
NC_012967:1593101:161171816117181612251534Escherichia coli B str. REL606 chromosome, complete genomeputative lysozyme1e-25115
NC_011748:1408280:142932114293211429854534Escherichia coli 55989, complete genomeputative membrane-associated lysozyme; Qin prophage7e-26115
CU928145:1408280:142932114293211429854534Escherichia coli 55989 chromosome, complete genomeputative membrane-associated lysozyme; Qin prophage7e-26115
NC_013008:2910567:291507929150792915612534Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeendolysin R of prophage CP-933V7e-26115
NC_013941:5317424:532577753257775326310534Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage lysozyme7e-26115
CU928145:1773642:178287717828771783410534Escherichia coli 55989 chromosome, complete genomeputative membrane-associated lysozyme; Qin prophage6e-26115
NC_011748:1773642:178287717828771783410534Escherichia coli 55989, complete genomeputative membrane-associated lysozyme; Qin prophage6e-26115
NC_002695:1929215:194461419446141945147534Escherichia coli O157:H7 str. Sakai, complete genomeputative endolysin4e-25113
NC_011353:2957962:295961729596172960150534Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelysozyme3e-25113
NC_013716:1138441:114990411499041150443540Citrobacter rodentium ICC168, complete genomeputative phage lysozyme7e-25112
NC_010473:1712984:172717317271731727706534Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted lysozyme2e-22104
NC_011750:1565000:157307915730791573612534Escherichia coli IAI39 chromosome, complete genomeputative membrane-associated lysozyme; Qin prophage2e-22104
NC_010468:2265423:228274722827472283280534Escherichia coli ATCC 8739, complete genomeLysozyme2e-22104
AC_000091:1627049:164123816412381641771534Escherichia coli W3110 DNA, complete genomepredicted lysozyme2e-22104
CP002185:1770815:177951917795191780052534Escherichia coli W, complete genomeQin prophage; predicted lysozyme2e-22104
CU928160:1668842:167754716775471678080534Escherichia coli IAI1 chromosome, complete genomeputative membrane-associated lysozyme; Qin prophage2e-22104
NC_000913:1625500:163754816375481638081534Escherichia coli K12, complete genomeQin prophage; predicted lysozyme2e-22104
CP002516:2305659:232580423258042326337534Escherichia coli KO11, complete genomeLysozyme2e-22104
NC_011751:1859606:186944018694401869973534Escherichia coli UMN026 chromosome, complete genomeputative membrane-associated lysozyme; Qin prophage2e-22104
NC_011741:1668842:167754716775471678080534Escherichia coli IAI1 chromosome, complete genomeputative membrane-associated lysozyme; Qin prophage2e-22104
NC_012759:1517500:152960715296071530140534Escherichia coli BW2952 chromosome, complete genomeQin prophage; putative lysozyme2e-22104
NC_013361:2138716:214859821485982149131534Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendolysin2e-22104
NC_016902:2305659:232580423258042326337534Escherichia coli KO11FL chromosome, complete genomelysozyme2e-22104
NC_007712:1997010:200917020091702009697528Sodalis glossinidius str. 'morsitans', complete genomephage lysozyme lysis protein5e-22103
NC_017060:59500:929469294693476531Rahnella aquatilis HX2 plasmid PRA1, complete sequencelysozyme1e-2098.2
NC_014562:1772842:177884917788491779388540Pantoea vagans C9-1 chromosome, complete genomeputative endolysin9e-2095.5
NC_009436:2776410:281083128108312811367537Enterobacter sp. 638, complete genomelysozyme3e-1994
NC_013008:3525428:354224235422423542472231Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage-related lysozyme1e-1892
NC_011353:3573641:358736535873653587595231Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelysozyme1e-1892