Pre_GI: BLASTP Hits

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Query: NC_009439:2427120:2441067 Pseudomonas mendocina ymp, complete genome

Start: 2441067, End: 2441327, Length: 261

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:5242392:524958052495805249849270Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein5e-1373.2
NC_008027:4280000:430236843023684302625258Pseudomonas entomophila L48, complete genomehypothetical protein2e-1064.7
NC_007492:2771021:277548927754892775746258Pseudomonas fluorescens PfO-1, complete genomehypothetical protein2e-0961.2
NC_009439:2427120:244899224489922449324333Pseudomonas mendocina ymp, complete genomehypothetical protein1e-0755.1
NC_010501:5735656:574322357432235743555333Pseudomonas putida W619, complete genomehypothetical protein7e-0752.8
NC_010501:1:137601376014092333Pseudomonas putida W619, complete genomehypothetical protein9e-0752.4
NC_009512:1:137401374014072333Pseudomonas putida F1, complete genomehypothetical protein9e-0752.4
NC_010322:1:145221452214854333Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein9e-0752.4
NC_017986:2548720:259190225919022592225324Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-0651.2
NC_010322:29983:584855848558808324Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein2e-0651.2
NC_010501:30000:624196241962742324Pseudomonas putida W619, complete genomehypothetical protein2e-0651.2
NC_009512:27783:577035770358026324Pseudomonas putida F1, complete genomehypothetical protein2e-0651.2
NC_015733:5909821:593949659394965939819324Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-0650.4
NC_002947:8394:457274572745939213Pseudomonas putida KT2440, complete genomehypothetical protein3e-0650.4
NC_002947:6123608:612879661287966129128333Pseudomonas putida KT2440, complete genomehypothetical protein3e-0650.4