Pre_GI: BLASTP Hits

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Query: NC_007333:1411050:1425799 Thermobifida fusca YX, complete genome

Start: 1425799, End: 1427214, Length: 1416

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007333:1411050:1419335141933514207951461Thermobifida fusca YX, complete genomehypothetical protein2e-61236
NC_008278:2813362:2816780281678028183601581Frankia alni ACN14a, complete genomeputative polyketide oxygenase/hydroxylase1e-42174
NC_013093:2230171:2232011223201122334381428Actinosynnema mirum DSM 43827, complete genomemonooxygenase FAD-binding1e-41171
NC_016935:4367000:4396165439616543976611497Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-41169
NC_015690:4643869:4659078465907846605741497Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein8e-41168
NC_016047:1234743:1235981123598112375491569Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeFAD-dependent monooxygenase9e-41168
NC_013947:613774:6314386314386329041467Stackebrandtia nassauensis DSM 44728 chromosome, complete genomemonooxygenase FAD-binding protein1e-39164
NC_009921:4903688:4915169491516949166081440Frankia sp. EAN1pec, complete genomePentachlorophenol monooxygenase5e-39162
NC_017186:1320186:1326739132673913281571419Amycolatopsis mediterranei S699 chromosome, complete genomeFAD-dependent oxidoreductase1e-37157
NC_014318:1320170:1326723132672313281411419Amycolatopsis mediterranei U32 chromosome, complete genomeFAD-dependent oxidoreductase1e-37157
NC_013595:5176000:5192010519201051935571548Streptosporangium roseum DSM 43021, complete genomehypothetical protein7e-35148
NC_003155:921494:9237789237789253701593Streptomyces avermitilis MA-4680, complete genomemonooxygenase6e-32139
NC_013510:170199:1711941711941726751482Thermomonospora curvata DSM 43183, complete genomemonooxygenase FAD-binding protein1e-30134
NC_009380:2310000:2327514232751423289741461Salinispora tropica CNB-440 chromosome, complete genomeFAD-binding monooxygenase3e-30133
NC_016582:93754:1090711090711105881518Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative oxygenase2e-29130
NC_014623:1829000:1835557183555718370081452Stigmatella aurantiaca DW4/3-1 chromosome, complete genomearomatic-ring hydroxylase1e-27125
NC_015953:46732:7931479314809271614Streptomyces sp. SirexAA-E chromosome, complete genomemonooxygenase FAD-binding protein3e-27123
NC_013440:4235489:4250039425003942515501512Haliangium ochraceum DSM 14365, complete genomemonooxygenase FAD-binding protein1e-24114
NC_010172:3413392:3413392341339234148731482Methylobacterium extorquens PA1, complete genomemonooxygenase FAD-binding3e-24113
NC_013172:466300:4873254873254888571533Brachybacterium faecium DSM 4810, complete genome2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase4e-24113
NC_010557:207846:2094962094962110911596Burkholderia ambifaria MC40-6 chromosome 3, complete sequencemonooxygenase FAD-binding2e-23110
NC_011094:1584038:1590088159008815915961509Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein6e-23108
NC_015761:1488807:1500144150014415016521509Salmonella bongori NCTC 12419, complete genomeoxygenase8e-23108
NC_016857:1576636:1579493157949315810281536Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein3e-22107
NC_017046:1574057:1579377157937715809121536Salmonella enterica subsp. enterica serovar Typhimurium str. 798monooxygenase3e-22107
NC_003197:1611302:1622640162264016241481509Salmonella typhimurium LT2, complete genomehypothetical protein3e-22107
NC_016810:1576636:1579493157949315810011509Salmonella enterica subsp. enterica serovar Typhimurium strputative monooxygenase3e-22107
NC_016856:1621279:1632617163261716341251509Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-22107
NC_016860:1614280:1620330162033016218381509Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-22107
NC_016863:1575488:1580808158080815823161509Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-22107
NC_010511:7024412:7027749702774970292841536Methylobacterium sp. 4-46 chromosome, complete genomeFAD-binding monooxygenase3e-22106
NC_011149:1578451:1591287159128715927951509Salmonella enterica subsp. enterica serovar Agona str. SL483,monooxygenase, FAD-binding4e-22106
NC_013406:3650300:3660192366019236617541563Paenibacillus sp. Y412MC10 chromosome, complete genomemonooxygenase FAD-binding protein1e-21104
NC_010505:1581429:1581429158142915831591731Methylobacterium radiotolerans JCM 2831, complete genomemonooxygenase FAD-binding5e-2099.4
NC_016935:1636278:1731742173174217333641623Paenibacillus mucilaginosus 3016 chromosome, complete genomemonooxygenase FAD-binding protein7e-2099
NC_015690:1109335:1166438116643811680601623Paenibacillus mucilaginosus KNP414 chromosome, complete genomemonooxygenase FAD-binding protein7e-2099
NC_017111:2248096:2272897227289722739641068Acetobacter pasteurianus IFO 3283-32, complete genomemonooxygenase FAD-binding1e-1998.2
NC_013209:2248119:2272920227292022739871068Acetobacter pasteurianus IFO 3283-01, complete genomemonooxygenase FAD-binding1e-1998.2
NC_010162:10962500:1097856010978560109800681509Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-1996.7
NC_016114:7282882:7285076728507672866591584Streptomyces flavogriseus ATCC 33331 chromosome, complete genomemonooxygenase FAD-binding protein6e-1995.9
NC_004193:375416:6671986671986686881491Oceanobacillus iheyensis HTE831, complete genomepentachlorophenol-4-monooxygenase6e-1995.9
NC_011894:6888562:6889870688987068914261557Methylobacterium nodulans ORS 2060, complete genomemonooxygenase FAD-binding2e-1894
NC_019673:3607958:3614658361465836161211464Saccharothrix espanaensis DSM 44229 complete genomeMonooxygenase, FAD-binding protein5e-1789.4
NC_014643:892138:9002229002229017001479Rothia dentocariosa ATCC 17931 chromosome, complete genomepentachlorophenol monooxygenase6e-1789.4
NC_013929:3953046:3958597395859739600961500Streptomyces scabiei 87.22 chromosome, complete genomemonooxygenase9e-1788.6
NC_009921:3551036:3593125359312535943511227Frankia sp. EAN1pec, complete genomemonooxygenase FAD-binding1e-1688.2
NC_008146:4019711:4040409404040940421301722Mycobacterium sp. MCS, complete genomemonooxygenase, FAD-binding protein2e-1687.8
NC_008705:4053070:4074891407489140766121722Mycobacterium sp. KMS, complete genomemonooxygenase, FAD-binding2e-1687.8
NC_011881:89705:1031991031991048661668Arthrobacter chlorophenolicus A6 plasmid pACHL02, completemonooxygenase FAD-binding2e-1687
NC_016590:1183470:1184291118429111859041614Burkholderia sp. YI23 chromosome 3, complete sequencemonooxygenase FAD-binding protein2e-1687
NC_013131:7437831:7453032745303274546451614Catenulispora acidiphila DSM 44928, complete genomemonooxygenase FAD-binding8e-1685.5
NC_016078:3130573:3130573313057331323121740Pelagibacterium halotolerans B2 chromosome, complete genomeputative dichlorophenol monooxygenase/hydroxylase8e-1685.5
NC_007337:10464:1768817688194841797Ralstonia eutropha JMP134 plasmid 1, complete sequenceMonooxygenase, FAD-binding1e-1585.1
NC_010524:4788753:4810441481044148121771737Leptothrix cholodnii SP-6, complete genomemonooxygenase FAD-binding2e-1584.3
NC_008061:2368517:2370588237058823723001713Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencemonooxygenase, FAD-binding3e-1583.2
NC_008543:2871747:2894682289468228963941713Burkholderia cenocepacia HI2424 chromosome 2, complete sequencemonooxygenase, FAD-binding3e-1583.2
NC_010515:1375091:1379117137911713808141698Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencemonooxygenase FAD-binding7e-1582.4
NC_007777:2459357:2477263247726324787981536Frankia sp. CcI3, complete genomemonooxygenase, FAD-binding7e-1582.4
NC_011001:63986:8490284902866141713Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative flavoprotein monooxygenase6e-1582.4
NC_010804:831000:8498428498428516291788Burkholderia multivorans ATCC 17616 chromosome 1, completeputative 2,4-dichlorophenol hydroxylase1e-1481.6
NC_017249:263873:2660002660002676101611Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1481.6
NC_010162:9311465:9313154931315493149621809Sorangium cellulosum 'So ce 56', complete genomePheA/TfdB family FAD-binding monooxygenase1e-1481.3
NC_013929:1670402:1672755167275516744431689Streptomyces scabiei 87.22 chromosome, complete genome3-(3-hydroxyphenyl)propionate hydroxylase3e-1480.5
NC_007951:1928906:1928906192890619306181713Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative 3-(3-hydroxy- phenyl)propionate hydroxylase (MhpA)2e-1480.5
NC_009142:3943829:3948118394811839506402523Saccharopolyspora erythraea NRRL 2338, complete genomeputative polyketide oxygenase/hydroxylase2e-1480.5
NC_006513:1949751:1964804196480419664831680Azoarcus sp. EbN1, complete genomehypothetical protein6e-1479.3
NC_011666:1572487:1582885158288515846811797Methylocella silvestris BL2, complete genomemonooxygenase FAD-binding6e-1479
NC_007384:307013:3242203242203258841665Shigella sonnei Ss046, complete genome3-(3-hydroxyphenyl)propionate hydroxylase1e-1378.2
NC_016111:6175975:6182314618231461836121299Streptomyces cattleya NRRL 8057, complete genome2-polyprenyl-6-methoxyphenol 4-hydroxylase3e-1377
NC_013037:2851940:2873882287388228755251644Dyadobacter fermentans DSM 18053, complete genomemonooxygenase FAD-binding4e-1376.6
NC_010473:1384000:1387278138727813889421665Escherichia coli str. K-12 substr. DH10B, complete genome3-(3-hydroxyphenyl)propionate hydroxylase4e-1376.6
NC_012917:3241196:3280889328088932823221434Pectobacterium carotovorum subsp. carotovorum PC1, complete genomemonooxygenase FAD-binding9e-1375.5
NC_010338:588000:5895335895335910711539Caulobacter sp. K31, complete genomemonooxygenase FAD-binding1e-1275.1
NC_015677:3339181:3339826333982633415681743Ramlibacter tataouinensis TTB310 chromosome, complete genomePentachlorophenol 4-monooxygenase2e-1274.3
NC_020453:1785473:1788214178821417898151602Agromonas oligotrophica S58 DNA, complete genomemonooxygenase, FAD-binding2e-1274.3
NC_003888:5790104:5791641579164157935241884Streptomyces coelicolor A3(2), complete genomepolyketide hydroxylase5e-1272.8
NC_007337:10464:2676526765285251761Ralstonia eutropha JMP134 plasmid 1, complete sequenceMonooxygenase, FAD-binding5e-1272.8
NC_009511:1746631:1745057174505717466341578Sphingomonas wittichii RW1 chromosome, complete genomeFAD-binding monooxygenase7e-1272.4
NC_008711:3701635:3711492371149237129431452Arthrobacter aurescens TC1, complete genomeFAD-binding monooxygenase, PheA/TfdB family1e-1172
NC_008595:2546696:2551419255141925524831065Mycobacterium avium 104, complete genomemonooxygenase, FAD-binding1e-1171.2
NC_018691:1322389:1324592132459213261931602Alcanivorax dieselolei B5 chromosome, complete genomeMonooxygenase, FAD-binding protein2e-1171.2
NC_009921:3473854:3512387351238735142221836Frankia sp. EAN1pec, complete genomemonooxygenase FAD-binding3e-1170.5
NC_014210:2277971:2279008227900822807921785Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,monooxygenase FAD-binding protein4e-1169.7
NC_007953:1043957:1042333104233310439641632Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative flavoprotein monooxygenase5e-1169.3
NC_014013:112008:1276641276641288811218Sphingobium japonicum UT26S chromosome 2, complete genomeputative monooxygenase9e-1168.6
NC_015381:1623587:1667332166733216689151584Burkholderia gladioli BSR3 chromosome 1, complete sequencemonooxygenase FAD-binding protein1e-1068.2
NC_014010:2689682:2709389270938927114192031Candidatus Puniceispirillum marinum IMCC1322 chromosome, completephenol 2-monooxygenase2e-1067.4
NC_010511:7553703:7568955756895575708591905Methylobacterium sp. 4-46 chromosome, complete genomephenol 2-monooxygenase3e-1067
NC_009921:3384116:3407259340725934089531695Frankia sp. EAN1pec, complete genomemonooxygenase FAD-binding6e-1065.9
NC_008391:1210451:1231979123197912335411563Burkholderia cepacia AMMD chromosome 2, complete sequencemonooxygenase, FAD-binding8e-1065.5
NC_015957:5082172:5097645509764550995101866Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD-binding monooxygenase2e-0964.3
NC_014168:1724993:1726011172601117276091599Segniliparus rotundus DSM 44985 chromosome, complete genomemonooxygenase FAD-binding protein3e-0963.9
NC_008726:4725389:4727334472733447291271794Mycobacterium vanbaalenii PYR-1, complete genomemonooxygenase, FAD-binding6e-0962.4
NC_011894:901630:9036739036739055771905Methylobacterium nodulans ORS 2060, complete genomePhenol hydroxylase domain protein dimerisation9e-0962
NC_008595:1792318:1798825179882518002521428Mycobacterium avium 104, complete genomemonooxygenase, FAD-binding9e-0962
NC_011894:3319856:3336800333680033387041905Methylobacterium nodulans ORS 2060, complete genomePhenol hydroxylase domain protein dimerisation1e-0861.6
NC_015381:1705383:1723640172364017253011662Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-0860.5
NC_015957:196000:2153312153312169651635Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD-binding monooxygenase4e-0860.1
NC_014391:2579919:260450726045072605169663Micromonospora aurantiaca ATCC 27029 chromosome, complete genomemonooxygenase1e-0758.5
NC_012982:2772976:2791800279180027932781479Hirschia baltica ATCC 49814, complete genomemonooxygenase FAD-binding2e-0758.2
NC_020911:3076791:3099027309902731007991773Octadecabacter antarcticus 307, complete genomeputative 3-[3-hydroxy-phenyl]propionate/3-hydroxycinnamic acid hydroxylase2e-0757.4
NC_003198:1463253:1471213147121314723751163Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-0653.1