Pre_GI: BLASTP Hits

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Query: NC_004567:343500:384038 Lactobacillus plantarum WCFS1, complete genome

Start: 384038, End: 386347, Length: 2310

Host Lineage: Lactobacillus plantarum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Originally isolated from human saliva. Common gastrointestinal bacterium used in food production. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015975:441580:4644374644374667162280Lactobacillus ruminis ATCC 27782 chromosome, complete genomeATP-dependent DNA helicase0829
NC_015978:352478:3729943729943752942301Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein0769
NC_014334:1848340:1869908186990818721992292Lactobacillus casei str. Zhang chromosome, complete genomesuperfamily I DNA and RNA helicase4e-157555
NC_013199:1966334:1984402198440219866932292Lactobacillus rhamnosus Lc 705, complete genomesuperfamily I DNA and RNA helicase-like protein3e-156552
NC_011772:1011220:1023748102374810260842337Bacillus cereus G9842, complete genomehelicase, UvrD/Rep family2e-125450
NC_011773:1050000:1069750106975010720802331Bacillus cereus AH820 chromosome, complete genomeUvrD/Rep family helicase4e-125449
NC_016779:991298:1009000100900010113302331Bacillus cereus F837/76 chromosome, complete genomeUvrD/Rep family helicase4e-124446
NC_017208:1050414:1066257106625710685932337Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeATP-dependent DNA helicase rep2e-124446
NC_011969:1084000:1101280110128011036162337Bacillus cereus Q1 chromosome, complete genomeATP-dependent DNA helicase replicase1e-123444
NC_011725:1032500:1048278104827810506112334Bacillus cereus B4264 chromosome, complete genomeUvrD/Rep family helicase3e-123442
NC_010184:1017000:1031326103132610336622337Bacillus weihenstephanensis KBAB4, complete genomeUvrD/REP helicase7e-123441
NC_014171:1018338:1036689103668910390222334Bacillus thuringiensis BMB171 chromosome, complete genomeATP-dependent DNA helicase rep2e-122440
NC_017200:1157835:1176271117627111786042334Bacillus thuringiensis serovar finitimus YBT-020 chromosome,helicase, UvrD/Rep family protein2e-122440
NC_004722:1008500:1021931102193110242642334Bacillus cereus ATCC 14579, complete genomeATP-dependent DNA helicase rep2e-120433
NC_012491:1187864:1187864118786411902242361Brevibacillus brevis NBRC 100599, complete genomeprobable DNA helicase involved in recombination1e-116421
NC_013406:4023367:4037035403703540394612427Paenibacillus sp. Y412MC10 chromosome, complete genomeUvrD/Rep family helicase2e-110400
NC_020291:4357425:4359233435923343614732241Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehelicase IV5e-85316
NC_003909:1139556:1140312114031211418891578Bacillus cereus ATCC 10987, complete genome5e-78293
NC_011898:3973627:3977028397702839793102283Clostridium cellulolyticum H10, complete genomesuperfamily I DNA helicase7e-74279
NC_008261:676000:6953866953866975062121Clostridium perfringens ATCC 13124, complete genomeputative helicase7e-68259
NC_008262:654000:6735736735736756932121Clostridium perfringens SM101, complete genomehelicase, putative1e-67258
NC_003366:728859:7480767480767501962121Clostridium perfringens str. 13, complete genomehypothetical protein2e-67257
NC_004557:2607073:2609418260941826115502133Clostridium tetani E88, complete genomeATP-dependent DNA helicase rep5e-63243
NC_015275:3407358:3444146344414634464312286Clostridium lentocellum DSM 5427 chromosome, complete genomeUvrD/REP helicase2e-60234
NC_008593:841291:8579148579148601992286Clostridium novyi NT, complete genomesuperfamily I DNA helicase4e-59229
NC_016012:104500:1170321170321191252094Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeATP-dependent DNA helicase2e-50201
NC_003909:1139556:113955611395561140365810Bacillus cereus ATCC 10987, complete genomehypothetical protein5e-42173
NC_015977:3424178:3522058352205835252703213Roseburia hominis A2-183 chromosome, complete genomeUvrD/Rep helicase family protein7e-37156
NC_004369:1552847:1568036156803615703812346Corynebacterium efficiens YS-314, complete genomehypothetical protein7e-28126
NC_006361:4574536:4576673457667345788532181Nocardia farcinica IFM 10152, complete genomeputative helicase9e-27122
NC_009342:1570000:1585112158511215874632352Corynebacterium glutamicum R chromosome, complete genomehypothetical protein3e-26120
NC_013947:1296877:1296877129687712988141938Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeSuperfamily I DNA and RNA helicase-like protein3e-25117
NC_018524:4988810:5009665500966550118152151Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeuvrD/REP helicase N-terminal domain protein6e-22106
NC_012803:1552122:1568191156819115704672277Micrococcus luteus NCTC 2665, complete genomeDNA/RNA helicase, superfamily I5e-1893.6
NC_016582:10287865:1030133210301332103034102079Streptomyces bingchenggensis BCW-1 chromosome, complete genomesuperfamily I DNA and RNA helicase-like protein1e-1792.4
NC_016113:11500:1173611736137632028Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceATP-dependent DNA helicase5e-1790.5
NC_016582:7946000:7960285796028579624622178Streptomyces bingchenggensis BCW-1 chromosome, complete genomesuperfamily I DNA and RNA helicase-like protein2e-1688.6
NC_009973:301391:3101723101723123402169Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completesuperfamily I DNA/RNA helicase6e-1686.7
NC_013729:380312:3803123803123824802169Kribbella flavida DSM 17836, complete genomeSuperfamily I DNA and RNA helicase-like protein2e-1584.7
NC_013757:1888850:1891505189150518936552151Geodermatophilus obscurus DSM 43160, complete genomesuperfamily I DNA and RNA helicase2e-1482
NC_014210:3170537:3190003319000331931493147Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Superfamily I DNA and RNA helicase5e-1377
NC_007498:3399478:3401690340169034036661977Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein9e-0962.8
NC_013510:2937530:2960722296072229633072586Thermomonospora curvata DSM 43183, complete genomeSuperfamily I DNA and RNA helicase-like protein5e-0860.5
NC_012918:1814000:1826660182666018285491890Geobacter sp. M21 chromosome, complete genomesuperfamily I DNA and RNA helicase-like protein3e-0758.2
NC_017093:7234589:7240800724080072424881689Actinoplanes missouriensis 431, complete genomehypothetical protein4e-0653.9
NC_007963:3553678:3568340356834035703882049Chromohalobacter salexigens DSM 3043, complete genomeATP-dependent DNA helicase Rep1e-0552.8