Pre_GI: BLASTP Hits

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Query: NC_004337:3049118:3087470 Shigella flexneri 2a str. 301, complete genome

Start: 3087470, End: 3090598, Length: 3129

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:3088907:3127175312717531303033129Shigella flexneri 2002017 chromosome, complete genomeOuter membrane fluffing protein01985
NC_004431:3409389:3491808349180834949363129Escherichia coli CFT073, complete genomeAntigen 43 precursor01909
NC_008253:334467:3525863525863557143129Escherichia coli 536, complete genomeputative autotransporter01896
NC_004431:1211000:1225454122545412287293276Escherichia coli CFT073, complete genomeAntigen 43 precursor01753
CP002797:4656327:4661666466166646644522787Escherichia coli NA114, complete genomePutative antigen 43 precursor01550
NC_004741:3041294:3079305307930530814252121Shigella flexneri 2a str. 2457T, complete genomeouter membrane fluffing protein01358
NC_013592:3263005:3266698326669832699253228Dickeya dadantii Ech586, complete genomeouter membrane autotransporter barrel domain protein01051
NC_013361:3313284:3325633332563333284792847Escherichia coli O26:H11 str. 11368 chromosome, complete genomeAidA-I adhesin0900
NC_007946:1119000:1133653113365311364992847Escherichia coli UTI89, complete genomeputative autotransporter0894
NC_008253:3161311:3168808316880831716542847Escherichia coli 536, complete genomeputative autotransporter0892
NC_013716:5201097:5224334522433452271802847Citrobacter rodentium ICC168, complete genomeputative adhesin autotransporter0890
NC_004741:3041294:307830630783063079199894Shigella flexneri 2a str. 2457T, complete genomeouter membrane fluffing protein1e-154548
NC_013717:5726:69396939117204782Citrobacter rodentium ICC168 plasmid pCROD1, complete sequenceputative autotransporter adhesin9e-47189
NC_013941:1460144:1475857147585714791353279Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeATP-binding component of a transporter5e-29130
NC_011750:2928990:2947201294720129488471647Escherichia coli IAI39 chromosome, complete genome1e-26122
NC_010498:2847359:2851680285168028563774698Escherichia coli SMS-3-5, complete genomehypothetical protein3e-26121
NC_011353:3573641:3604560360456036092754716Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein7e-26120
NC_002695:3468873:3500324350032435050394716Escherichia coli O157:H7 str. Sakai, complete genomeputative ATP-binding component of a transport system7e-26120
NC_010468:1130000:1141442114144211460224581Escherichia coli ATCC 8739, complete genomeouter membrane autotransporter barrel domain protein2e-25119
NC_007384:2933625:2940374294037429418821509Shigella sonnei Ss046, complete genome2e-25119
NC_013008:3525428:3559285355928535638714587Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeadhesin1e-25119
NC_002655:3538656:3567614356761435722004587Escherichia coli O157:H7 EDL933, complete genomeputative ATP-binding component of a transport system1e-25119
NC_011751:3048490:3080198308019830849014704Escherichia coli UMN026 chromosome, complete genomeadhesin-like autotransporter3e-25118
AC_000091:2747520:2776802277680227813824581Escherichia coli W3110 DNA, complete genomeadhesin-like autotransporter3e-25117
NC_000913:2746886:2776168277616827807484581Escherichia coli K12, complete genomeadhesin-like autotransporter3e-25117
NC_012759:2633949:2661980266198026665604581Escherichia coli BW2952 chromosome, complete genomeadhesin-like autotransporter3e-25117
NC_011741:2818750:2826442282644228276861245Escherichia coli IAI1 chromosome, complete genome7e-25116
CU928160:2818750:2826442282644228276861245Escherichia coli IAI1 chromosome, complete genomefragment of adhesin-like autotransporter (part 1)7e-25116
NC_011741:2818750:2823426282342628252491824Escherichia coli IAI1 chromosome, complete genome2e-23112
CU928160:2818750:2823426282342628252491824Escherichia coli IAI1 chromosome, complete genomefragment of adhesin-like autotransporter (part 2)2e-23112
NC_014618:2788533:2800332280033228046994368Enterobacter cloacae SCF1 chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein6e-1894
NC_016822:3065426:307167830716783072502825Shigella sonnei 53G, complete genomehypothetical protein6e-1687
NC_020418:603750:6244686244686269932526Morganella morganii subsp. morganii KT, complete genomePutative autotransporter1e-1276.6
NC_009425:1:1047210472152564785Enterobacter sp. 638 plasmid pENTE01, complete sequenceouter membrane autotransporter3e-1068.6
NC_006932:1939145:1951994195199419567694776Brucella abortus biovar 1 str. 9-941 chromosome I, complete5e-1067.8
NC_013119:1932402:1944264194426419490394776Brucella microti CCM 4915 chromosome 1, complete sequenceouter membrane autotransporter5e-1067.8
NC_003317:48375:5378953789579134125Brucella melitensis 16M chromosome I, complete sequenceEXTRACELLULAR SERINE PROTEASE4e-1067.8
NC_017251:1923391:1935250193525019400314782Brucella suis 1330 chromosome I, complete genomeouter membrane autotransporter6e-1067.4
NC_004310:1923404:1935263193526319400444782Brucella suis 1330 chromosome I, complete sequenceouter membrane autotransporter6e-1067.4
NC_016795:456110:4615084615084635232016Brucella abortus A13334 chromosome 1, complete sequenceouter membrane autotransporter7e-1067
NC_007618:1937261:1951873195187319538882016Brucella melitensis biovar Abortus 2308 chromosome I, complete7e-1067
NC_010742:1938428:1953196195319619550551860Brucella abortus S19 chromosome 1, complete sequenceouter membrane autotransporter9e-1066.6
NC_016778:1216739:1222168122216812239341767Brucella canis HSK A52141 chromosome 1, complete sequenceouter membrane autotransporter1e-0966.2
NC_013209:1406793:1424770142477014270762307Acetobacter pasteurianus IFO 3283-01, complete genomeouter membrane protein2e-0965.9
NC_017100:1407804:1425781142578114280872307Acetobacter pasteurianus IFO 3283-03, complete genomeouter membrane protein2e-0965.9
NC_017108:1406787:1424764142476414270702307Acetobacter pasteurianus IFO 3283-12, complete genomeouter membrane protein2e-0965.9
NC_017111:1406787:1424764142476414270702307Acetobacter pasteurianus IFO 3283-32, complete genomeouter membrane protein2e-0965.9
NC_017121:1406787:1424764142476414270702307Acetobacter pasteurianus IFO 3283-07, complete genomeouter membrane protein2e-0965.9
NC_017125:1407804:1425781142578114280872307Acetobacter pasteurianus IFO 3283-22, complete genomeouter membrane protein2e-0965.9
NC_017146:1407804:1425781142578114280872307Acetobacter pasteurianus IFO 3283-26, complete genomeouter membrane protein2e-0965.9
NC_017150:1406793:1424770142477014270762307Acetobacter pasteurianus IFO 3283-01-42C, complete genomeouter membrane protein2e-0965.9
NC_017244:1941974:1956910195691019586071698Brucella melitensis M28 chromosome chromosome 1, complete sequenceouter membrane autotransporter3e-0964.7
NC_017246:1942293:1957229195722919589261698Brucella melitensis M5-90 chromosome chromosome I, completeouter membrane autotransporter barrel domain-containing protein3e-0964.7
NC_017248:1933357:1948294194829419499911698Brucella melitensis NI chromosome chromosome I, complete sequenceExtracellular serine protease3e-0964.7
NC_012751:275336:2828972828972850412145Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completetype V secretory pathway, adhesin6e-0963.9
NC_020063:2531643:2541491254149125440102520Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane autotransporter barrel domain-containing protein2e-0862.4
NC_013209:1663704:1685509168550916877492241Acetobacter pasteurianus IFO 3283-01, complete genomeouter membrane protein5e-0860.8
NC_017108:1663698:1685503168550316877432241Acetobacter pasteurianus IFO 3283-12, complete genomeouter membrane protein5e-0860.8
NC_017111:1663698:1685503168550316877432241Acetobacter pasteurianus IFO 3283-32, complete genomeouter membrane protein5e-0860.8
NC_017121:1663698:1685503168550316877432241Acetobacter pasteurianus IFO 3283-07, complete genomeouter membrane protein5e-0860.8
NC_013716:2898434:2911789291178929146982910Citrobacter rodentium ICC168, complete genomeputative outer membrane autotransporter5e-0860.8
NC_011750:1978801:1980462198046219831102649Escherichia coli IAI39 chromosome, complete genomeputative outer membrane autotransporter barrel, putative pectin lyase fold8e-0860.1
NC_010498:1995500:1999462199946220017832322Escherichia coli SMS-3-5, complete genomeautotransporter (AT) family porin1e-0759.7
NC_013361:1634226:1646955164695516492762322Escherichia coli O26:H11 str. 11368 chromosome, complete genomeAidA-I adhesin2e-0758.5
NC_011415:1273551:1287653128765312899742322Escherichia coli SE11 chromosome, complete genomeputative autotransporter2e-0758.5
NC_011741:1232510:1246613124661312489342322Escherichia coli IAI1 chromosome, complete genomeputative outer membrane autotransporter barrel pectin lyase fold3e-0758.2
CU928160:1232510:1246613124661312489342322Escherichia coli IAI1 chromosome, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold3e-0758.2
NC_009445:6424000:6425947642594764355499603Bradyrhizobium sp. ORS 278 chromosome, complete genomelarge exoprotein involved in heme utilization or adhesion5e-0757.8
NC_016816:3333000:3357378335737833603352958Pantoea ananatis LMG 5342, complete genomeType V secretory pathway, adhesin AidA4e-0757.8
NC_013209:160892:1640401640401671953156Acetobacter pasteurianus IFO 3283-01, complete genomeouter membrane protein6e-0757.4
NC_017100:160892:1640401640401671953156Acetobacter pasteurianus IFO 3283-03, complete genomeouter membrane protein6e-0757.4
NC_017108:160892:1640401640401671953156Acetobacter pasteurianus IFO 3283-12, complete genomeouter membrane protein6e-0757.4
NC_017111:160892:1640401640401671953156Acetobacter pasteurianus IFO 3283-32, complete genomeouter membrane protein6e-0757.4
NC_017121:160892:1640401640401671953156Acetobacter pasteurianus IFO 3283-07, complete genomeouter membrane protein6e-0757.4
NC_017125:160892:1640401640401671953156Acetobacter pasteurianus IFO 3283-22, complete genomeouter membrane protein6e-0757.4
NC_017146:160892:1640401640401671953156Acetobacter pasteurianus IFO 3283-26, complete genomeouter membrane protein6e-0757.4
NC_017150:160892:1640401640401671953156Acetobacter pasteurianus IFO 3283-01-42C, complete genomeouter membrane protein6e-0757.4
NC_011751:1446073:1466883146688314685321650Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-0656.2
AP010958:1339263:1353366135336613556872322Escherichia coli O103:H2 str. 12009 DNA, complete genomeAidA-I adhesin-like protein1e-0656.2
CP002185:1298675:1312778131277813150992322Escherichia coli W, complete genome1e-0656.2
NC_013353:1339263:1353366135336613556872322Escherichia coli O103:H2 str. 12009, complete genomeAidA-I adhesin-like protein1e-0656.2
NC_013364:1477248:1514816151481615165671752Escherichia coli O111:H- str. 11128, complete genome2e-0655.8
NC_020181:3328844:3336408333640833387202313Enterobacter aerogenes EA1509E, complete genomeouter membrane autotransporter2e-0655.8
NC_010658:1193225:120818312081831208812630Shigella boydii CDC 3083-94, complete genome2e-0655.8
NC_008783:507939:5165335165335189802448Bartonella bacilliformis KC583, complete genomeputative adhesin/invasin2e-0655.5
NC_020300:583874:5885645885645910982535Bartonella australis Aust/NH1, complete genomepertactin family virulence factor/autotransporter2e-0655.5
CU928145:1300863:1315755131575513180642310Escherichia coli 55989 chromosome, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold3e-0654.7
NC_011748:1300863:1315755131575513180642310Escherichia coli 55989, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold3e-0654.7