Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:1460144 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
146014414612501107tRNA5-methylaminomethyl-2-thiouridylate methyltransferase contains the PP-loop ATPase domainQuickGO ontologyBLASTP
14613041461765462phosphatase nudJQuickGO ontologyBLASTP
14617751462428654ribosomal large subunit pseudouridine synthase EQuickGO ontologyBLASTP
146260014638501251isocitrate dehydrogenase NADPQuickGO ontologyBLASTP
14639531464276324anti-adapter protein iraMQuickGO ontologyBLASTP
14649721465376405hypothetical proteinBLASTP
14655971466328732transcriptional regulator mlrAQuickGO ontologyBLASTP
14680541468290237hypothetical proteinBLASTP
14682671468440174hypothetical proteinBLASTP
14683331468605273hypothetical proteinBLASTP
14686341468900267hypothetical proteinBLASTP
14690131469261249hypothetical proteinBLASTP
146959714711201524Cyclic diguanylate phosphodiesterase EAL domain proteinQuickGO ontologyBLASTP
14712521471470219hypothetical proteinBLASTP
14715871471706120hypothetical proteinBLASTP
14745681474903336hypothetical proteinBLASTP
14749071475251345hypothetical proteinBLASTP
14752531475426174hypothetical proteinBLASTP
14755271475712186hypothetical proteinBLASTP
147585714791353279ATP-binding component of a transporterQuickGO ontologyBLASTP
14795071479773267cell division topological specificity factorQuickGO ontologyBLASTP
14797771480589813septum site-determining protein minDQuickGO ontologyBLASTP