Pre_GI: BLASTP Hits

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Query: NC_002976:638799:638204 Staphylococcus epidermidis RP62A, complete genome

Start: 638204, End: 638809, Length: 606

Host Lineage: Staphylococcus epidermidis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a strongly adherent, slime-producing, pathogenic strain isolated from a patient with intravascular catheter-associated sepsis. Common skin bacterium. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is the most prevalent and persistent Staphylococcus species on human skin. Has emerged as a common cause of nosocomial (hospital-acquired) infections, including catheter-associated infections and septicemia, particularly in immunocompromised patients. Highly resistant to many antibiotics including penicillins and cephalosporins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004461:746284:745689745689746294606Staphylococcus epidermidis ATCC 12228, complete genomequinol oxidase polypeptide III QoxC1e-99362
NC_020164:1784223:180459018045901805195606Staphylococcus warneri SG1, complete genomeputative quinol oxidase polypeptide III2e-93341
NC_017190:1465079:152565915256591526282624Bacillus amyloliquefaciens LL3 chromosome, complete genomecytochrome caa3 oxidase (subunit III)1e-38159
NC_015663:2694373:272570627257062726317612Enterobacter aerogenes KCTC 2190 chromosome, complete genomecytochrome o ubiquinol oxidase subunit III1e-32139
NC_015422:2326942:234783423478342348466633Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome o ubiquinol oxidase subunit III1e-32139
NC_014910:2045088:206447120644712065103633Alicycliphilus denitrificans BC chromosome, complete genomecytochrome o ubiquinol oxidase, subunit iii2e-32139
NC_013205:526281:570422570422571030609Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,cytochrome c oxidase subunit III6e-32137
NC_017328:385552:399562399562400176615Shigella flexneri 2002017 chromosome, complete genomeCytochrome o ubiquinol oxidase subunit 37e-32136
NC_008258:401786:419349419349419963615Shigella flexneri 5 str. 8401, complete genomecytochrome o ubiquinol oxidase subunit III7e-32136
NC_004337:367687:381698381698382312615Shigella flexneri 2a str. 301, complete genomecytochrome o ubiquinol oxidase subunit III7e-32136
NC_004741:366822:380831380831381445615Shigella flexneri 2a str. 2457T, complete genomecytochrome o ubiquinol oxidase subunit III7e-32136
NC_020181:2714559:271952727195272720402876Enterobacter aerogenes EA1509E, complete genomeCytochrome O ubiquinol oxidase subunit III3e-31134
NC_015723:1047418:105053310505331051189657Cupriavidus necator N-1 chromosome 2, complete sequencecytochrome o ubiquinol oxidase subunit2e-30132
NC_015497:3614817:362317336231733623820648Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecytochrome o ubiquinol oxidase, subunit III7e-30130
NC_009654:91096:102866102866103477612Marinomonas sp. MWYL1, complete genomecytochrome o ubiquinol oxidase subunit III7e-29127
NC_012779:2127542:213849821384982139115618Edwardsiella ictaluri 93-146, complete genomecytochrome o ubiquinol oxidase, subunit III, putative2e-28125
NC_020300:131782:146048146048146713666Bartonella australis Aust/NH1, complete genomecytochrome o ubiquinol oxidase subunit III5e-27120
NC_010943:1379707:139674013967401397378639Stenotrophomonas maltophilia K279a, complete genomeputative quinol oxidase subunit 36e-27120
NC_004129:5781413:579255157925515793177627Pseudomonas fluorescens Pf-5, complete genomecytochrome o ubiquinol oxidase, subunit III5e-26117
NC_007508:1446526:146733514673351467961627Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecytochrome O ubiquinol oxidase subunit III4e-26117
NC_005955:139907:153917153917154582666Bartonella quintana str. Toulouse, complete genomeCytochrome o ubiquinol oxidase subunit III1e-25115
NC_005956:152497:166493166493167158666Bartonella henselae str. Houston-1, complete genomeCytochrome o ubiquinol oxidase subunit III3e-25114
NC_015675:4493758:449623544962354496921687Mesorhizobium opportunistum WSM2075 chromosome, complete genomecytochrome c oxidase subunit III7e-23107
NC_016632:1049510:104890310489031049520618Serratia symbiotica str. 'Cinara cedri' chromosome, completecytochrome o ubiquinol oxidase subunit III3e-21101
NC_018677:111500:145982145982146527546Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeCytochrome O ubiquinol oxidase subunit III5e-2097.4
NC_009523:2769154:279269627926962793304609Roseiflexus sp. RS-1 chromosome, complete genomecytochrome c oxidase subunit III2e-1995.9
NC_017256:515579:514965514965515582618Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,cytochrome O ubiquinol oxidase subunit III3e-1994.7
NC_017253:509494:515090515090515737648Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,cytochrome O ubiquinol oxidase subunit III2e-1892.4
NC_002528:505951:514189514189514806618Buchnera aphidicola str. APS (Acyrthosiphon pisum), completecytochrome O ubiquinol oxidase subunit III2e-1892
NC_015387:1965711:197311319731131973781669Marinithermus hydrothermalis DSM 14884 chromosome, complete genomecytochrome c oxidase subunit III4e-1788.2
NC_017259:480656:493088493088493708621Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,cytochrome O ubiquinol oxidase subunit III6e-1787.4
NC_010511:4313769:434165843416584342380723Methylobacterium sp. 4-46 chromosome, complete genomecytochrome c oxidase subunit III5e-1684.3
NC_004757:1089057:110039011003901101235846Nitrosomonas europaea ATCC 19718, complete genomeCytochrome c oxidase, subunit III2e-1582.8
NC_009465:29735:378063780638690885Candidatus Vesicomyosocius okutanii HA, complete genomecytochrome c oxidase subunit III2e-1582.4
NC_015379:89441:112405112405113292888Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative cytochrome-c oxidase, subunit III3e-1581.6
NC_004061:498483:515322515322515891570Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomecytochrome O ubiquinol oxidase C3e-1581.6
NC_016830:81382:978949789498781888Pseudomonas fluorescens F113 chromosome, complete genomeprotein CoIII3e-1581.6
NC_014643:2056280:215095921509592151516558Rothia dentocariosa ATCC 17931 chromosome, complete genomecytochrome c oxidase subunit III2e-1479
NC_004369:2203947:221417622141762214829654Corynebacterium efficiens YS-314, complete genomeputative cytochrome c oxidase subunit III2e-1478.6
NC_009338:2925286:296654129665412967134594Mycobacterium gilvum PYR-GCK chromosome, complete genomecytochrome c oxidase subunit III3e-1478.2
NC_015850:169180:189558189558190196639Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome O ubiquinol oxidase subunit III3e-1478.2
NC_003888:2305901:231362323136232314243621Streptomyces coelicolor A3(2), complete genomecytochrome c oxidase subunit III4e-1477.8
NC_015731:402280:414138414138414995858Nitrosomonas sp. Is79A3 chromosome, complete genomecytochrome c oxidase subunit III9e-1476.6
NC_010617:1428902:143564914356491436287639Kocuria rhizophila DC2201, complete genomecytochrome c oxidase subunit III1e-1376.6
NC_018750:2005229:201485620148562015476621Streptomyces venezuelae ATCC 10712, complete genomeCytochrome c oxidase polypeptide III2e-1375.5
NC_015942:1047576:105707210570721057710639Acidithiobacillus ferrivorans SS3 chromosome, complete genomecytochrome c oxidase subunit III8e-1373.6
NC_016802:1615748:162572816257281626318591Corynebacterium diphtheriae HC02 chromosome, complete genomecytochrome C oxidase subunit III1e-1273.2
NC_014012:207289:223195223195224070876Shewanella violacea DSS12, complete genomecytochrome c oxidase subunit III2e-1272.8
NC_015953:1756493:176297917629791763599621Streptomyces sp. SirexAA-E chromosome, complete genomeCytochrome-c oxidase2e-1272.4
NC_010572:6293417:630507263050726305692621Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative cytochrome c oxidase subunit III2e-1272.4
NC_014151:2312000:231790123179012318548648Cellulomonas flavigena DSM 20109 chromosome, complete genomeCytochrome-c oxidase3e-1272
NC_021177:1922930:193240019324001933020621Streptomyces fulvissimus DSM 40593, complete genomeCytochrome c oxidase subunit III3e-1271.6
NC_019673:1656680:167746916774691678077609Saccharothrix espanaensis DSM 44229 complete genomeputative cytochrome c oxidase subunit 33e-1271.6
NC_007940:1178000:119354811935481194381834Rickettsia bellii RML369-C, complete genomeCytochrome c oxidase subunit III4e-1271.2
NC_015387:1965711:1970351197035119727352385Marinithermus hydrothermalis DSM 14884 chromosome, complete genomecytochrome c oxidase, subunit I6e-1270.9
NC_015588:1965787:197156319715631972165603Isoptericola variabilis 225 chromosome, complete genomeCytochrome-c oxidase1e-1170.1
NC_015514:2414617:242209724220972422723627Cellulomonas fimi ATCC 484 chromosome, complete genomecytochrome-c oxidase1e-1169.7
NC_012803:1302261:130652713065271307165639Micrococcus luteus NCTC 2665, complete genomeheme/copper-type cytochrome/quinol oxidase, subunit 31e-1169.3
NC_009664:3718927:373628137362813736940660Kineococcus radiotolerans SRS30216, complete genomecytochrome c oxidase subunit III3e-1168.6
NC_009883:343067:347761347761348594834Rickettsia bellii OSU 85-389, complete genomeCytochrome c oxidase subunit III6e-1167.4
NC_007484:3429140:343917034391703440036867Nitrosococcus oceani ATCC 19707, complete genomeCytochrome c oxidase, subunit III7e-1167
NC_009488:1430693:145809414580941458918825Orientia tsutsugamushi str. Boryong, complete genomecytochrome c oxidase subunit III8e-1167
NC_015671:1540860:155556815555681556215648Cellvibrio gilvus ATCC 13127 chromosome, complete genomeCytochrome-c oxidase1e-1066.6
NC_014315:3278386:328544432854443286310867Nitrosococcus watsoni C-113 chromosome, complete genomecytochrome c oxidase1e-1066.2
NC_017278:48630:5324753247556222376Thermus sp. CCB_US3_UF1 chromosome, complete genomeCytochrome c oxidase polypeptide I+III2e-1065.9
NC_016929:197403:197403197403198254852Rickettsia canadensis str. CA410 chromosome, complete genomecytochrome c oxidase subunit III2e-1065.5
NC_011884:1029328:104920810492081049834627Cyanothece sp. PCC 7425, complete genomecytochrome c oxidase subunit III2e-1065.5
NC_013743:1937125:195589419558941956853960Haloterrigena turkmenica DSM 5511, complete genomeCytochrome-c oxidase4e-1064.7
NC_013922:230842:2565412565412590242484Natrialba magadii ATCC 43099 chromosome, complete genomecytochrome c oxidase subunit I6e-1064.3
NC_013169:1661135:166443316644331665086654Kytococcus sedentarius DSM 20547, complete genomeheme/copper-type cytochrome/quinol oxidase, subunit 36e-1063.9
NC_009075:937782:967361967361967990630Burkholderia pseudomallei 668 chromosome II, complete sequencecytochrome c oxidase, subunit III8e-1063.5
NC_007435:2701242:273162427316242732253630Burkholderia pseudomallei 1710b chromosome II, complete sequencecytochrome c oxidase, subunit III family protein1e-0962.8
NC_009078:862796:893230893230893859630Burkholderia pseudomallei 1106a chromosome II, complete sequencecytochrome c oxidase, subunit III1e-0962.8
NC_015850:2259769:227444422744442275079636Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome O ubiquinol oxidase subunit III2e-0962.8
NC_006351:881655:912150912150912743594Burkholderia pseudomallei K96243 chromosome 2, complete sequencecytochrome c oxidase subunit III protein2e-0962.4
NC_015914:2658845:267263626726362673406771Cyclobacterium marinum DSM 745 chromosome, complete genomecytochrome c oxidase subunit III2e-0962.4
NC_007484:1355880:136609513660951366739645Nitrosococcus oceani ATCC 19707, complete genomecytochrome/quinol oxidase subunit 33e-0962
NC_019964:1961237:1975947197594719786402694Halovivax ruber XH-70, complete genomeheme/copper-type cytochrome/quinol oxidase, subunit 12e-0858.9
NC_014831:1906691:192768319276831928249567Thermaerobacter marianensis DSM 12885 chromosome, complete genomecytochrome c oxidase subunit III3e-0858.5
NC_013894:1380564:140442814044281405219792Thermocrinis albus DSM 14484 chromosome, complete genomecytochrome c oxidase subunit III3e-0858.2
NC_014210:3742112:375285837528583753484627Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Cytochrome-c oxidase5e-0857.8
NC_006833:902744:906600906600907418819Wolbachia endosymbiont strain TRS of Brugia malayi, completeCytochrome c oxidase, subunit 37e-0857.4
NC_012026:1135041:115046211504621151280819Anaplasma marginale str. Florida, complete genomecytochrome C oxidase, subunit III (coxC)6e-0857.4
NC_004842:1132441:114625811462581147076819Anaplasma marginale str. St. Maries, complete genomecytochrome C oxidase subunit III6e-0857.4
NC_007798:586500:593233593233594057825Neorickettsia sennetsu str. Miyayama, complete genomecytochrome c oxidase, subunit III8e-0857
NC_020054:1335699:134975213497521350537786Fibrella aestuarina BUZ 2 drat genomecytochrome c oxidase subunit III9e-0857
NC_016626:1592781:161178616117861612400615Burkholderia sp. YI23 plasmid byi_1p, complete sequencecytochrome c oxidase subunit III9e-0857
NC_018645:1798874:180054318005431801139597Desulfobacula toluolica Tol2, complete genomecytochrome c oxidase subunit III CtaE2e-0756.2
NC_013730:6901725:691454369145436915340798Spirosoma linguale DSM 74, complete genomecytochrome c oxidase subunit III2e-0755.8
NC_013532:85371:966109661097428819Anaplasma centrale str. Israel, complete genomecytochrome c oxidase subunit III3e-0755.1
NC_019962:2189432:218943221894322190331900Natrinema pellirubrum DSM 15624, complete genomeheme/copper-type cytochrome/quinol oxidase, subunit 33e-0755.1
NC_008595:1911491:192615519261551926667513Mycobacterium avium 104, complete genomecytochrome c oxidase, subunit III family protein6e-0753.9
NC_006370:166000:174467174467175384918Photobacterium profundum SS9 chromosome 1, complete sequenceputative cytochrome c oxidase subunit III8e-0753.9
NC_013009:608515:611065611065611886822Neorickettsia risticii str. Illinois, complete genomecytochrome c oxidase subunit III9e-0753.5
NC_006396:2057209:2057209205720920597732565Haloarcula marismortui ATCC 43049 chromosome I, complete sequencecytochrome c oxidase subunit I1e-0653.1
NC_002977:925588:929111929111929977867Methylococcus capsulatus str. Bath, complete genomecytochrome c oxidase, subunit III1e-0652.8
NC_019974:1909244:1935497193549719379712475Natronococcus occultus SP4, complete genomeheme/copper-type cytochrome/quinol oxidase, subunit 15e-0651.2
NC_015914:2658845:267203226720322672613582Cyclobacterium marinum DSM 745 chromosome, complete genomecytochrome c oxidase subunit III6e-0650.8
NC_015703:3444025:345688334568833457644762Runella slithyformis DSM 19594 chromosome, complete genomecytochrome c oxidase subunit III6e-0650.8
NC_009338:4869700:486970048697004870302603Mycobacterium gilvum PYR-GCK chromosome, complete genomecytochrome c oxidase subunit III6e-0650.8