Pre_GI: BLASTP Hits

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Query: NC_002516:1474000:1475464 Pseudomonas aeruginosa PAO1, complete genome

Start: 1475464, End: 1476306, Length: 843

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011144:2710876:272531427253142726300987Phenylobacterium zucineum HLK1, complete genometranscriptional regulator3e-32138
NC_009937:5033152:503543550354355036382948Azorhizobium caulinodans ORS 571, complete genomeputative iron siderophore sensor protein4e-26118
NC_010338:2136193:2139478213947821405121035Caulobacter sp. K31, complete genomeanti-FecI sigma factor, FecR2e-25116
NC_012560:2546000:254697025469702547803834Azotobacter vinelandii DJ, complete genomeAnti-sigma factor, FecR family2e-23109
NC_021150:2546000:254698225469822547815834Azotobacter vinelandii CA6, complete genomeAnti-sigma factor, FecR family2e-23109
NC_020409:584000:5932265932265942901065Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Anti-FecI sigma factor, FecR9e-23107
NC_010322:768849:791778791778792734957Pseudomonas putida GB-1 chromosome, complete genomeanti-FecI sigma factor FecR8e-22104
NC_014100:2782000:280326228032622804257996Caulobacter segnis ATCC 21756 chromosome, complete genomeanti-FecI sigma factor FecR1e-21103
NC_010995:2123909:2130175213017521311971023Cellvibrio japonicus Ueda107, complete genomeprobable transmembrane sensor2e-20100
NC_015593:2841856:288455028845502885536987Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeanti-FecI sigma factor FecR7e-2097.8
NC_010943:1379707:138250813825081383476969Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane protein8e-2097.4
NC_016112:1735044:175536217553621756315954Methylomicrobium alcaliphilum chromosome, complete genomeAnti-FecI sigma factor, FecR2e-1996.3
NC_014305:97055:99531995311005651035Erwinia billingiae Eb661 plasmid pEB170, complete sequenceAnti-FecI sigma factor2e-1893.2
NC_011958:1121387:114404611440461145020975Rhodobacter sphaeroides KD131 chromosome 2, complete genomeFecR protein1e-1790.9
NC_009040:43791:623866238663360975Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completeputative FecR9e-1890.9
NC_015976:3118804:311880431188043119787984Sphingobium sp. SYK-6, complete genomeputative anti-sigma factor2e-1790.1
NC_014664:1360524:137378513737851374765981Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeanti-FecI sigma factor, FecR2e-1790.1
NC_017187:937649:950809950809951777969Arcobacter butzleri ED-1, complete genomesigma factor regulator2e-1789.7
NC_009850:972692:985853985853986821969Arcobacter butzleri RM4018, complete genomesigma factor regulatory protein, FecR/PupR family3e-1789.4
NC_007947:1429165:1440674144067414417201047Methylobacillus flagellatus KT, complete genomeputative FecR5e-1788.6
NC_015572:427732:455162455162456127966Methylomonas methanica MC09 chromosome, complete genomeanti-FecI sigma factor FecR8e-1787.8
NC_013061:2077603:2092795209279520939521158Pedobacter heparinus DSM 2366, complete genomeFecR protein1e-1687.4
NC_018691:1293449:131480613148061315771966Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor FecR2e-1686.3
NC_014640:5047201:5066881506688150678941014Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein4e-1685.5
NC_016609:4152977:4168767416876741697801014Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR1e-1584
NC_014640:5047201:506272550627255063720996Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein2e-1583.2
NC_013061:1236235:1260605126060512617591155Pedobacter heparinus DSM 2366, complete genomeFecR protein2e-1583.2
NC_009615:2902871:2917094291709429181521059Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor6e-1581.6
NC_008686:1592073:161110316111031612077975Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative FecR5e-1581.6
NC_015563:4093650:4097302409730240983301029Delftia sp. Cs1-4 chromosome, complete genomeanti-FecI sigma factor FecR7e-1581.3
NC_014228:3591758:3599750359975036007931044Xenorhabdus nematophila ATCC 19061, complete genomeProtein fecR1e-1480.5
NC_014934:869715:8749888749888761511164Cellulophaga algicola DSM 14237 chromosome, complete genomeanti-feci sigma factor, fecr1e-1480.5
NC_015966:1145974:1168398116839811694411044Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeFecR anti-FecI sigma factor1e-1480.1
NC_016776:625628:640475640475641404930Bacteroides fragilis 638R, complete genomeputative anti-sigma factor2e-1480.1
NC_006347:625328:637012637012637941930Bacteroides fragilis YCH46, complete genomeputative anti-sigma factor3e-1479.3
NC_010473:4596500:461659546165954617548954Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport2e-1479.3
AC_000091:4501430:452144445214444522397954Escherichia coli W3110 DNA, complete genometransmembrane signal transducer for ferric citrate transport2e-1479.3
NC_012759:4433500:445352244535224454475954Escherichia coli BW2952 chromosome, complete genomefec operon regulator FecR2e-1479.3
NC_013061:2288134:229629622962962297117822Pedobacter heparinus DSM 2366, complete genomeFecR protein4e-1479
NC_012962:4591295:459839645983964599361966Photorhabdus asymbiotica, complete genomeprotein fecr5e-1478.6
NC_018691:318662:318662318662319606945Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor, FecR5e-1478.6
NC_016822:4889656:489301448930144893967954Shigella sonnei 53G, complete genomefec operon regulator FecR5e-1478.2
NC_009615:2902871:290793229079322908915984Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor5e-1478.2
NC_015556:2265940:230352123035212304444924Pseudomonas fulva 12-X chromosome, complete genomeanti-FecI sigma factor, FecR7e-1477.8
NC_015497:4683741:470812247081224709078957Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeanti-FecI sigma factor, FecR8e-1477.8
NC_017192:1933106:193807519380751939040966Arcobacter sp. L, complete genomesigma factor regulator1e-1377
NC_016610:1805126:1820970182097018221481179Tannerella forsythia ATCC 43037 chromosome, complete genomesigma factor regulatory protein, FecR/PupR family1e-1377
NC_005126:5188976:519356151935615194526966Photorhabdus luminescens subsp. laumondii TTO1, complete genomeProtein fecR1e-1377
NC_014640:2693060:269635326963532697321969Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein2e-1376.6
NC_005966:1780468:178461817846181785559942Acinetobacter sp. ADP1, complete genomemembrane bound regulator in multi-component regulatory system with cytoplasmic FecI (sigma factor) and FecA (outer membrane receptor)5e-1375.1
NC_012560:201237:216665216665217627963Azotobacter vinelandii DJ, complete genomeanti-sigma factor, FecR family6e-1374.7
NC_021150:201237:216665216665217627963Azotobacter vinelandii CA6, complete genomeanti-sigma factor, FecR family6e-1374.7
NC_008687:133728:153212153212154198987Paracoccus denitrificans PD1222 chromosome 2, complete sequenceputative FecR9e-1374.3
NC_004547:1174650:120816712081671209129963Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeiron(III) dicitrate sensor protein9e-1374.3
NC_013061:3390399:3401073340107334021881116Pedobacter heparinus DSM 2366, complete genomeFecR protein8e-1374.3
NC_015594:1210736:121465212146521215626975Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeanti-FecI sigma factor FecR8e-1374.3
NC_016609:2951301:2974250297425029754611212Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR1e-1273.9
NC_015160:3749636:3754954375495437560991146Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR1e-1273.9
NC_015160:1734454:1749552174955217507301179Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR1e-1273.9
NC_016609:4233701:4238499423849942396711173Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR2e-1273.6
NC_013132:35061:5502555025561551131Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR1e-1273.6
NC_018691:359695:359695359695360609915Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor, FecR2e-1273.2
NC_015844:1188360:1205126120512612062891164Zobellia galactanivorans, complete genomeanti-sigma factor4e-1272.4
NC_009615:2709040:2723565272356527246441080Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor7e-1271.2
NC_015160:3180193:3195787319578731969471161Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR8e-1271.2
NC_013132:1165218:1166951116695111680991149Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR8e-1271.2
NC_008027:4889662:489228348922834893212930Pseudomonas entomophila L48, complete genomeFecR-like transmembrane sensor1e-1170.5
NC_013132:3877500:3892955389295538941061152Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR1e-1170.5
NC_015410:1324313:132982813298281330793966Pseudomonas mendocina NK-01 chromosome, complete genomeputative transmembrane sensor4e-1168.9
NC_016612:3843358:387155938715593872506948Klebsiella oxytoca KCTC 1686 chromosome, complete genomefec operon regulator FecR4e-1168.9
NC_014375:1146328:117307511730751174031957Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeanti-FecI sigma factor, FecR5e-1168.6
NC_015160:1055220:1075291107529110764691179Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR6e-1168.2
NC_016609:5890292:5909702590970259109341233Niastella koreensis GR20-10 chromosome, complete genomeanti-FecI sigma factor FecR1e-1067.4
NC_009615:3756196:376181637618163762739924Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor1e-1067.4
NC_009614:29604:296042960430494891Bacteroides vulgatus ATCC 8482 chromosome, complete genomeanti-sigma factor1e-1067
NC_015844:3580591:3598600359860036001381539Zobellia galactanivorans, complete genomeanti-sigma factor1e-1067
NC_015277:5211779:5227944522794452291011158Sphingobacterium sp. 21 chromosome, complete genomeanti-FecI sigma factor, FecR2e-1066.6
NC_013132:153163:1710611710611722061146Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR2e-1066.6
NC_013061:1052957:1058539105853910597021164Pedobacter heparinus DSM 2366, complete genomeFecR protein2e-1066.6
NC_015277:2283530:2296154229615422973021149Sphingobacterium sp. 21 chromosome, complete genomeanti-FecI sigma factor, FecR3e-1065.9
NC_015311:1157679:1173272117327211744891218Prevotella denticola F0289 chromosome, complete genomeFecR/PupR family sigma factor regulatory protein4e-1065.5
NC_015160:2239933:2256633225663322578081176Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR5e-1065.1
NC_008027:2648560:265110926511092652029921Pseudomonas entomophila L48, complete genomeFecR-like transmembrane sensor7e-1064.7
NC_013421:1954915:197058119705811971534954Pectobacterium wasabiae WPP163, complete genomeanti-FecI sigma factor, FecR1e-0963.9
NC_015164:1812439:182494818249481825859912Bacteroides salanitronis DSM 18170 chromosome, complete genomeanti-FecI sigma factor, FecR2e-0963.5
NC_007953:1088933:108798010879801088936957Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative FecR3e-0962.8
NC_007974:934000:952517952517953503987Ralstonia metallidurans CH34 chromosome 2, complete sequenceputative FecR4e-0962.4
NC_009615:4031335:404787540478754048804930Parabacteroides distasonis ATCC 8503 chromosome, complete genomeanti-sigma factor3e-0962.4
NC_013061:1948365:1964151196415119653771227Pedobacter heparinus DSM 2366, complete genomeFecR protein3e-0962.4
NC_013132:3959258:3974681397468139758381158Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR4e-0962
NC_004663:5194400:520130652013065202235930Bacteroides thetaiotaomicron VPI-5482, complete genomeputative anti-sigma factor6e-0961.6
NC_015160:1786350:1805893180589318070381146Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR1e-0860.8
NC_019904:2597722:2599345259934526003971053Echinicola vietnamensis DSM 17526 chromosome, complete genomeFe2+-dicitrate sensor, membrane protein9e-0960.8
NC_014933:364463:386293386293387267975Bacteroides helcogenes P 36-108 chromosome, complete genomeanti-FecI sigma factor, FecR1e-0860.5
NC_007492:3655545:367411036741103675048939Pseudomonas fluorescens PfO-1, complete genomePutative FecR1e-0860.5
NC_015976:2150676:2158706215870621597341029Sphingobium sp. SYK-6, complete genomeputative anti-sigma factor2e-0860.1
NC_004663:3827521:3847435384743538484751041Bacteroides thetaiotaomicron VPI-5482, complete genomeputative anti-sigma factor5e-0858.5
NC_009614:868452:8750898750898760991011Bacteroides vulgatus ATCC 8482 chromosome, complete genomeanti-sigma factor2e-0756.6
NC_015160:4285542:4298357429835742994991143Odoribacter splanchnicus DSM 20712 chromosome, complete genomeanti-FecI sigma factor, FecR3e-0756.2
NC_010322:768849:785508785508786506999Pseudomonas putida GB-1 chromosome, complete genomeanti-FecI sigma factor FecR5e-0755.1
NC_013132:2523780:2541780254178025429251146Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR8e-0754.3
NC_020054:2066510:2091801209180120929281128Fibrella aestuarina BUZ 2 drat genomeanti-FecI sigma factor, FecR3e-0652.8
NC_015177:2642368:266130726613072662281975Pedobacter saltans DSM 12145 chromosome, complete genomeanti-FecI sigma factor, FecR3e-0652.8
NC_014032:269844:2737022737022748081107Salinibacter ruber M8 chromosome, complete genomeanti-sigma factor3e-0652.4
NC_018691:3525430:353716735371673538147981Alcanivorax dieselolei B5 chromosome, complete genomeSigma factor regulatory protein, FecR/PupR family5e-0652