Query: NC_021182:3438601 Clostridium pasteurianum BC1, complete genome
Start: 3438601, End: 3460260, Length: 21660
Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria
General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_021182:1077721 | 1077721 | 1096397 | 18677 | Clostridium pasteurianum BC1, complete genome | 0 | 1536 | BLASTN svg | BLASTP svg |
NC_014328:522045 | 522045 | 545160 | 23116 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 3e-101 | 377 | BLASTN svg | BLASTP svg |
NC_015687:279641 | 279641 | 302196 | 22556 | Clostridium acetobutylicum DSM 1731 chromosome, complete genome | 5e-66 | 260 | BLASTN svg | BLASTP svg |
NC_003030:279643 | 279643 | 302198 | 22556 | Clostridium acetobutylicum ATCC 824, complete genome | 5e-66 | 260 | BLASTN svg | BLASTP svg |
NC_014328:2588994 | 2588994 | 2606993 | 18000 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 5e-57 | 230 | BLASTN svg | BLASTP svg |
NC_021182:2883716* | 2883716 | 2908567 | 24852 | Clostridium pasteurianum BC1, complete genome | 3e-52 | 214 | BLASTN svg | BLASTP svg |
NC_021182:2965395 | 2965395 | 2988500 | 23106 | Clostridium pasteurianum BC1, complete genome | 6e-41 | 176 | BLASTN svg | BLASTP svg |
NC_021182:4022894 | 4022894 | 4041426 | 18533 | Clostridium pasteurianum BC1, complete genome | 2e-40 | 174 | BLASTN svg | BLASTP svg |
NC_021182:300415 | 300415 | 318731 | 18317 | Clostridium pasteurianum BC1, complete genome | 2e-40 | 174 | BLASTN svg | BLASTP svg |
NC_021182:2921000 | 2921000 | 2955373 | 34374 | Clostridium pasteurianum BC1, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
NC_021182:380500* | 380500 | 400927 | 20428 | Clostridium pasteurianum BC1, complete genome | 4e-39 | 170 | BLASTN svg | BLASTP svg |
NC_021182:3525523* | 3525523 | 3566737 | 41215 | Clostridium pasteurianum BC1, complete genome | 4e-39 | 170 | BLASTN svg | BLASTP svg |
NC_021182:401129 | 401129 | 425262 | 24134 | Clostridium pasteurianum BC1, complete genome | 6e-38 | 167 | BLASTN svg | BLASTP svg |
NC_014166:33138* | 33138 | 56041 | 22904 | Arcobacter nitrofigilis DSM 7299 chromosome, complete genome | 1e-35 | 159 | BLASTN svg | BLASTP svg |
NC_021182:1473535 | 1473535 | 1496599 | 23065 | Clostridium pasteurianum BC1, complete genome | 2e-31 | 145 | BLASTN svg | BLASTP svg |
NC_021182:1654903 | 1654903 | 1676782 | 21880 | Clostridium pasteurianum BC1, complete genome | 9e-31 | 143 | BLASTN svg | BLASTP svg |
NC_021182:1188000 | 1188000 | 1210839 | 22840 | Clostridium pasteurianum BC1, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_021182:93000* | 93000 | 144655 | 51656 | Clostridium pasteurianum BC1, complete genome | 8e-22 | 113 | BLASTN svg | BLASTP svg |
NC_021182:1009526 | 1009526 | 1033099 | 23574 | Clostridium pasteurianum BC1, complete genome | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_021182:1983456 | 1983456 | 2005189 | 21734 | Clostridium pasteurianum BC1, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_021182:1761789 | 1761789 | 1782079 | 20291 | Clostridium pasteurianum BC1, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_021182:3409199* | 3409199 | 3431778 | 22580 | Clostridium pasteurianum BC1, complete genome | 5e-20 | 107 | BLASTN svg | BLASTP svg |
NC_021182:2667408* | 2667408 | 2690110 | 22703 | Clostridium pasteurianum BC1, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_013771:684966 | 684966 | 711099 | 26134 | Cyanobacterium UCYN-A, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010520:1146000 | 1146000 | 1168849 | 22850 | Clostridium botulinum A3 str. Loch Maree, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_021182:4602683* | 4602683 | 4627701 | 25019 | Clostridium pasteurianum BC1, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_015275:521436* | 521436 | 553623 | 32188 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_021182:3576815 | 3576815 | 3600611 | 23797 | Clostridium pasteurianum BC1, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_021182:4427468* | 4427468 | 4450212 | 22745 | Clostridium pasteurianum BC1, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_009012:1901492 | 1901492 | 1923064 | 21573 | Clostridium thermocellum ATCC 27405, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_009437:2579161 | 2579161 | 2622924 | 43764 | Caldicellulosiruptor saccharolyticus DSM 8903, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_005791:837505 | 837505 | 860715 | 23211 | Methanococcus maripaludis S2, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_021182:2059143* | 2059143 | 2082390 | 23248 | Clostridium pasteurianum BC1, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015847:909938 | 909938 | 932868 | 22931 | Methanococcus maripaludis XI chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_013887:17160 | 17160 | 41281 | 24122 | Methanocaldococcus sp. FS406-22 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_003552:4782635 | 4782635 | 4807599 | 24965 | Methanosarcina acetivorans C2A, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010546:553774 | 553774 | 576285 | 22512 | Cyanothece sp. ATCC 51142 chromosome circular, complete sequence | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |