Pre_GI: BLASTN Hits

Some Help

Query: NC_021182:3438601 Clostridium pasteurianum BC1, complete genome

Start: 3438601, End: 3460260, Length: 21660

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021182:10777211077721109639718677Clostridium pasteurianum BC1, complete genome01536BLASTN svgBLASTP svg
NC_014328:52204552204554516023116Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-101377BLASTN svgBLASTP svg
NC_015687:27964127964130219622556Clostridium acetobutylicum DSM 1731 chromosome, complete genome5e-66260BLASTN svgBLASTP svg
NC_003030:27964327964330219822556Clostridium acetobutylicum ATCC 824, complete genome5e-66260BLASTN svgBLASTP svg
NC_014328:25889942588994260699318000Clostridium ljungdahlii ATCC 49587 chromosome, complete genome5e-57230BLASTN svgBLASTP svg
NC_021182:2883716*2883716290856724852Clostridium pasteurianum BC1, complete genome3e-52214BLASTN svgBLASTP svg
NC_021182:29653952965395298850023106Clostridium pasteurianum BC1, complete genome6e-41176BLASTN svgBLASTP svg
NC_021182:40228944022894404142618533Clostridium pasteurianum BC1, complete genome2e-40174BLASTN svgBLASTP svg
NC_021182:30041530041531873118317Clostridium pasteurianum BC1, complete genome2e-40174BLASTN svgBLASTP svg
NC_021182:29210002921000295537334374Clostridium pasteurianum BC1, complete genome1e-39172BLASTN svgBLASTP svg
NC_021182:380500*38050040092720428Clostridium pasteurianum BC1, complete genome4e-39170BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome4e-39170BLASTN svgBLASTP svg
NC_021182:40112940112942526224134Clostridium pasteurianum BC1, complete genome6e-38167BLASTN svgBLASTP svg
NC_014166:33138*331385604122904Arcobacter nitrofigilis DSM 7299 chromosome, complete genome1e-35159BLASTN svgBLASTP svg
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome2e-31145BLASTN svgBLASTP svg
NC_021182:16549031654903167678221880Clostridium pasteurianum BC1, complete genome9e-31143BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome1e-26129BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome8e-22113BLASTN svgBLASTP svg
NC_021182:10095261009526103309923574Clostridium pasteurianum BC1, complete genome3e-21111BLASTN svgBLASTP svg
NC_021182:19834561983456200518921734Clostridium pasteurianum BC1, complete genome1e-20109BLASTN svgBLASTP svg
NC_021182:17617891761789178207920291Clostridium pasteurianum BC1, complete genome1e-20109BLASTN svgBLASTP svg
NC_021182:3409199*3409199343177822580Clostridium pasteurianum BC1, complete genome5e-20107BLASTN svgBLASTP svg
NC_021182:2667408*2667408269011022703Clostridium pasteurianum BC1, complete genome3e-18101BLASTN svgBLASTP svg
NC_013771:68496668496671109926134Cyanobacterium UCYN-A, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010520:11460001146000116884922850Clostridium botulinum A3 str. Loch Maree, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015275:521436*52143655362332188Clostridium lentocellum DSM 5427 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_021182:35768153576815360061123797Clostridium pasteurianum BC1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_009012:19014921901492192306421573Clostridium thermocellum ATCC 27405, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009437:25791612579161262292443764Caldicellulosiruptor saccharolyticus DSM 8903, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_005791:83750583750586071523211Methanococcus maripaludis S2, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_021182:2059143*2059143208239023248Clostridium pasteurianum BC1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015847:90993890993893286822931Methanococcus maripaludis XI chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013887:17160171604128124122Methanocaldococcus sp. FS406-22 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003552:47826354782635480759924965Methanosarcina acetivorans C2A, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010546:55377455377457628522512Cyanothece sp. ATCC 51142 chromosome circular, complete sequence2e-0765.9BLASTN svgBLASTP svg