Pre_GI: BLASTN Hits

Some Help

Query: NC_018080:6048516 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 6048516, End: 6103599, Length: 55084

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome03445BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome02807BLASTN svgBLASTP svg
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome01400BLASTN svgBLASTP svg
NC_002947:59610965961096598439523300Pseudomonas putida KT2440, complete genome01326BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome0860BLASTN svgBLASTP svg
NC_004578:21246821246824209929632Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-161577BLASTN svgBLASTP svg
NC_005773:16757931675793169861222820Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-67266BLASTN svgBLASTP svg
NC_010804:996837996837104668249846Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-62250BLASTN svgBLASTP svg
NC_014910:2779573*2779573280354723975Alicycliphilus denitrificans BC chromosome, complete genome8e-61244BLASTN svgBLASTP svg
NC_018691:46192454619245464565226408Alcanivorax dieselolei B5 chromosome, complete genome2e-58236BLASTN svgBLASTP svg
NC_014532:11087511087513531724443Halomonas elongata DSM 2581, complete genome1e-56230BLASTN svgBLASTP svg
NC_007645:6407370*6407370643016222793Hahella chejuensis KCTC 2396, complete genome1e-56230BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome2e-55226BLASTN svgBLASTP svg
NC_002947:21576482157648219238834741Pseudomonas putida KT2440, complete genome3e-48202BLASTN svgBLASTP svg
NC_015138:41034574103457412794224486Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-47198BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome3e-45192BLASTN svgBLASTP svg
NC_015138:32238632238634172219337Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-44188BLASTN svgBLASTP svg
NC_010515:11242981124298115292928632Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence4e-44188BLASTN svgBLASTP svg
NC_003919:4618988*4618988466090741920Xanthomonas axonopodis pv. citri str. 306, complete genome6e-43184BLASTN svgBLASTP svg
NC_015563:33494233494235315818217Delftia sp. Cs1-4 chromosome, complete genome2e-37167BLASTN svgBLASTP svg
NC_008786:36818473681847370092519079Verminephrobacter eiseniae EF01-2, complete genome2e-37167BLASTN svgBLASTP svg
NC_008752:26190326190328210620204Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-37167BLASTN svgBLASTP svg
NC_007509:366836686033156664Burkholderia sp. 383 chromosome 3, complete sequence2e-37167BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome1e-34157BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-33153BLASTN svgBLASTP svg
NC_010801:50500050500052310518106Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-33153BLASTN svgBLASTP svg
NC_009138:1974935*1974935203606461130Herminiimonas arsenicoxydans, complete genome9e-33151BLASTN svgBLASTP svg
NC_007963:3553678*3553678357230918632Chromohalobacter salexigens DSM 3043, complete genome9e-33151BLASTN svgBLASTP svg
NC_007908:4069150*4069150409259123442Rhodoferax ferrireducens T118, complete genome4e-32149BLASTN svgBLASTP svg
NC_011071:22073852207385223164424260Stenotrophomonas maltophilia R551-3, complete genome2e-30143BLASTN svgBLASTP svg
NC_013854:33054333054335359923057Azospirillum sp. B510, complete genome9e-30141BLASTN svgBLASTP svg
NC_011420:2803196*2803196282514221947Rhodospirillum centenum SW, complete genome2e-27133BLASTN svgBLASTP svg
NC_008786:1936626*1936626196111324488Verminephrobacter eiseniae EF01-2, complete genome8e-27131BLASTN svgBLASTP svg
NC_008687:30245030245032509922650Paracoccus denitrificans PD1222 chromosome 2, complete sequence3e-26129BLASTN svgBLASTP svg
NC_010524:4402478*4402478442898926512Leptothrix cholodnii SP-6, complete genome5e-25125BLASTN svgBLASTP svg
NC_011894:983572983572101559932028Methylobacterium nodulans ORS 2060, complete genome2e-24123BLASTN svgBLASTP svg
NC_011894:67311156731115675281021696Methylobacterium nodulans ORS 2060, complete genome2e-24123BLASTN svgBLASTP svg
NC_007510:33400083340008337541735410Burkholderia sp. 383 chromosome 1, complete sequence3e-23119BLASTN svgBLASTP svg
NC_005773:20800020800023117523176Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-23119BLASTN svgBLASTP svg
NC_007645:6500059*6500059654594145883Hahella chejuensis KCTC 2396, complete genome2e-21113BLASTN svgBLASTP svg
NC_012856:20719420719423833931146Ralstonia pickettii 12D chromosome 1, complete genome8e-21111BLASTN svgBLASTP svg
NC_004578:20738207386960648869Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-19105BLASTN svgBLASTP svg
NC_010943:24228382422838245809935262Stenotrophomonas maltophilia K279a, complete genome2e-18103BLASTN svgBLASTP svg
NC_010622:249625*24962530832658702Burkholderia phymatum STM815 chromosome 1, complete sequence2e-18103BLASTN svgBLASTP svg
NC_009720:43675844367584439276525182Xanthobacter autotrophicus Py2, complete genome2e-18103BLASTN svgBLASTP svg
NC_009050:212270*21227028083968570Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence3e-1799.6BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_009439:37702823770282380177231491Pseudomonas mendocina ymp, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_010002:45448184544818456374018923Delftia acidovorans SPH-1, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_010170:4533416*4533416456674433329Bordetella petrii, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_018868:28675002867500289242724928Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_011901:62571262571266531339602Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-1593.7BLASTN svgBLASTP svg
NC_015572:45767784576778460783531058Methylomonas methanica MC09 chromosome, complete genome7e-1591.7BLASTN svgBLASTP svg
NC_005773:47972424797242481709919858Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_008463:53135275313527535528941763Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_011206:18732971873297189165018354Acidithiobacillus ferrooxidans ATCC 53993, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_015424:3890293*3890293391528924997Aeromonas veronii B565 chromosome, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_007952:30375903037590305617618587Burkholderia xenovorans LB400 chromosome 2, complete sequence1e-1387.7BLASTN svgBLASTP svg
NC_011071:42358304235830426191326084Stenotrophomonas maltophilia R551-3, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_014924:30654303065430309278427355Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_015947:41968004196800422059923800Burkholderia sp. JV3 chromosome, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_007802:1484641*1484641150591621276Jannaschia sp. CCS1, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_007275:112112521125Pseudomonas syringae pv. phaseolicola 1448A small plasmid, complete4e-1385.7BLASTN svgBLASTP svg
NC_007274:72979729799468121703Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete4e-1385.7BLASTN svgBLASTP svg
NC_008060:3155133*3155133320509949967Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence2e-1283.8BLASTN svgBLASTP svg
NC_010681:12345001234500126213227633Burkholderia phytofirmans PsJN chromosome 1, complete sequence2e-1283.8BLASTN svgBLASTP svg
NC_010725:4219500*4219500425012730628Methylobacterium populi BJ001, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_014121:2514544*2514544255659942056Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-1283.8BLASTN svgBLASTP svg
NC_009142:26926932692693271625123559Saccharopolyspora erythraea NRRL 2338, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_003888:7561923*7561923764778785865Streptomyces coelicolor A3(2), complete genome3e-1179.8BLASTN svgBLASTP svg
NC_004578:51921105192110522245930350Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_007005:16368751636875167981442940Pseudomonas syringae pv. syringae B728a, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_010514:600060002855022551Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, complete1e-1077.8BLASTN svgBLASTP svg
NC_010943:44766544476654449856421911Stenotrophomonas maltophilia K279a, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_011894:57879905787990583359945610Methylobacterium nodulans ORS 2060, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_009649:948719487111709922229Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,2e-0973.8BLASTN svgBLASTP svg
NC_007347:3612918*3612918363789324976Ralstonia eutropha JMP134 chromosome 1, complete sequence2e-0973.8BLASTN svgBLASTP svg
NC_014363:16805781680578170738226805Olsenella uli DSM 7084 chromosome, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_010102:45570374557037457661219576Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,7e-0971.9BLASTN svgBLASTP svg
NC_007912:23181723181726481332997Saccharophagus degradans 2-40, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008781:330919*33091934993719019Polaromonas naphthalenivorans CJ2, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_009720:62226262226265580233541Xanthobacter autotrophicus Py2, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_014034:3570034*3570034359343423401Rhodobacter capsulatus SB1003 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_014973:24300024300026234519346Geobacter sp. M18 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_019897:36698883669888369684126954Thermobacillus composti KWC4 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_015690:15420611542061156749825438Paenibacillus mucilaginosus KNP414 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_014836:33278332785876525488Desulfurispirillum indicum S5 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_011206:20195772019577203811818542Acidithiobacillus ferrooxidans ATCC 53993, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_009720:90088490088492712426241Xanthobacter autotrophicus Py2, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_015556:13043713043716194631510Pseudomonas fulva 12-X chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
CP002797:4603787*4603787464340739621Escherichia coli NA114, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_004741:25930122593012261557622565Shigella flexneri 2a str. 2457T, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_008344:23747612374761240364328883Nitrosomonas eutropha C91, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_008344:669498*66949869235322856Nitrosomonas eutropha C91, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_009921:32558333255833327496419132Frankia sp. EAN1pec, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_011750:4947500*4947500496714419645Escherichia coli IAI39 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_011958:53426*534267609922674Rhodobacter sphaeroides KD131 chromosome 2, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_012881:24054142405414243328727874Desulfovibrio salexigens DSM 2638, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015563:31328331328333492521643Delftia sp. Cs1-4 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_020453:78263587826358785809331736Agromonas oligotrophica S58 DNA, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_020126:18301471830147184929119145Myxococcus stipitatus DSM 14675, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_018720:11860581186058120587819821Bifidobacterium asteroides PRL2011 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_016027:16471101647110169572448615Gluconacetobacter xylinus NBRC 3288, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015656:132633*13263316991437282Frankia symbiont of Datisca glomerata chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015567:1127780*1127780116575637977Serratia sp. AS9 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015566:1127595*1127595116557137977Serratia sp. AS12 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007434:111607*11160713392422318Burkholderia pseudomallei 1710b chromosome I, complete sequence6e-0661.9BLASTN svgBLASTP svg
NC_007645:713930*71393073723023301Hahella chejuensis KCTC 2396, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_009074:3791232*3791232381784126610Burkholderia pseudomallei 668 chromosome I, complete sequence6e-0661.9BLASTN svgBLASTP svg
NC_009076:3876733*3876733389976123029Burkholderia pseudomallei 1106a chromosome I, complete sequence6e-0661.9BLASTN svgBLASTP svg
NC_011958:73575573575578945053696Rhodobacter sphaeroides KD131 chromosome 2, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_012803:2195808*2195808224976153954Micrococcus luteus NCTC 2665, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_012997:46217644621764464391922156Teredinibacter turnerae T7901, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_013174:373726*37372639441720692Jonesia denitrificans DSM 20603, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_013757:30121303012130303570423575Geodermatophilus obscurus DSM 43160, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_014541:41679164167916419249724582Ferrimonas balearica DSM 9799 chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_014844:2028666*2028666205226323598Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_015556:51564151564153855622916Pseudomonas fulva 12-X chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_020388:48680348680351020323401Natronomonas moolapensis 8.8.11 complete genome6e-0661.9BLASTN svgBLASTP svg
NC_006350:3957454*3957454398298825535Burkholderia pseudomallei K96243 chromosome 1, complete sequence6e-0661.9BLASTN svgBLASTP svg