Pre_GI: BLASTN Hits

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Query: NC_015410:3003417 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 3003417, End: 3026937, Length: 23521

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008027:33873663387366341245025085Pseudomonas entomophila L48, complete genome01760BLASTN svgBLASTP svg
NC_009512:31189073118907313838119475Pseudomonas putida F1, complete genome01495BLASTN svgBLASTP svg
NC_020211:1655826*1655826167870522880Serratia marcescens WW4, complete genome5e-159569BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome2e-139504BLASTN svgBLASTP svg
NC_008570:2216736*2216736227194055205Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-96361BLASTN svgBLASTP svg
NC_009832:16642381664238169623231995Serratia proteamaculans 568, complete genome1e-70276BLASTN svgBLASTP svg
AP010958:92293792293795098628050Escherichia coli O103:H2 str. 12009 DNA, complete genome6e-69270BLASTN svgBLASTP svg
NC_013959:839928399210878124790Sideroxydans lithotrophicus ES-1 chromosome, complete genome5e-54220BLASTN svgBLASTP svg
NC_009074:21175002117500214668929190Burkholderia pseudomallei 668 chromosome I, complete sequence1e-48202BLASTN svgBLASTP svg
NC_007963:27770662777066279798320918Chromohalobacter salexigens DSM 3043, complete genome5e-48200BLASTN svgBLASTP svg
NC_015138:46665444666544468852321980Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-40174BLASTN svgBLASTP svg
NC_010508:19806891980689200677326085Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence3e-37165BLASTN svgBLASTP svg
NC_015740:26143172614317265004935733Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-33153BLASTN svgBLASTP svg
NC_014931:55739425573942559409920158Variovorax paradoxus EPS chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_004578:59167115916711594513828428Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-24121BLASTN svgBLASTP svg
NC_001264:28266282666040532140Deinococcus radiodurans R1 chromosome 2, complete sequence3e-24121BLASTN svgBLASTP svg
NC_015224:17031301703130172897125842Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-21111BLASTN svgBLASTP svg
NC_010002:1879220*1879220196064881429Delftia acidovorans SPH-1, complete genome5e-20107BLASTN svgBLASTP svg
NC_007963:31729131729134102923739Chromohalobacter salexigens DSM 3043, complete genome5e-20107BLASTN svgBLASTP svg
NC_003143:16910001691000171055719558Yersinia pestis CO92, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004088:29370772937077296291925843Yersinia pestis KIM, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_005810:15200001520000154409924100Yersinia pestis biovar Microtus str. 91001, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_006155:18079021807902182857520674Yersinia pseudotuberculosis IP 32953, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008149:27731392773139279513521997Yersinia pestis Nepal516, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008150:90500090500092909924100Yersinia pestis Antiqua, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010465:28205002820500286978249283Yersinia pseudotuberculosis YPIII, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010634:18095001809500182909919600Yersinia pseudotuberculosis PB1/+, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015711:7601733*7601733762447622744Myxococcus fulvus HW-1 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002939:17383317383319586722035Geobacter sulfurreducens PCA, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015733:29635482963548298726023713Pseudomonas putida S16 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008390:26436532643653267440130749Burkholderia cepacia AMMD chromosome 1, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_014722:1084616*1084616111430129686Burkholderia rhizoxinica HKI 454, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009720:1006201*1006201103109924899Xanthobacter autotrophicus Py2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011894:34757753475775349467518901Methylobacterium nodulans ORS 2060, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010551:25378762537876256370525830Burkholderia ambifaria MC40-6 chromosome 1, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_007510:28051212805121282621621096Burkholderia sp. 383 chromosome 1, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_008609:39211133921113395241031298Pelobacter propionicus DSM 2379, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015581:771482*77148280463933158Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013093:30684863068486311387545390Actinosynnema mirum DSM 43827, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004578:21246821246824209929632Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007517:28209092820909283908818180Geobacter metallireducens GS-15, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010622:23859322385932240909923168Burkholderia phymatum STM815 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_015422:3366500*3366500339127624777Alicycliphilus denitrificans K601 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002696:2829002*2829002285565626655Caulobacter crescentus CB15, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009348:2125698*2125698216701441317Aeromonas salmonicida subsp. salmonicida A449, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012724:30703863070386309007619691Burkholderia glumae BGR1 chromosome 1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015311:26268502626850267310446255Prevotella denticola F0289 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020260:32770073277007330315226146Cronobacter sakazakii Sp291, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005773:48992524899252493544536194Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007164:622000*62200065646734468Corynebacterium jeikeium K411, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011894:2747491*2747491277359926109Methylobacterium nodulans ORS 2060, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015677:14600001460000148235222353Ramlibacter tataouinensis TTB310 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020126:7255111*7255111728027825168Myxococcus stipitatus DSM 14675, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004578:51921105192110522245930350Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006513:16954871695487172039324907Azoarcus sp. EbN1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007952:30375903037590305617618587Burkholderia xenovorans LB400 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_008752:32176953217695323954921855Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009076:11025001102500112459922100Burkholderia pseudomallei 1106a chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_009792:13455001345500136809322594Citrobacter koseri ATCC BAA-895, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013729:22878842287884231009922216Kribbella flavida DSM 17836, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013757:1544348*1544348158219937852Geodermatophilus obscurus DSM 43160, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015410:3791500*3791500381292521426Pseudomonas mendocina NK-01 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_019673:1275627*1275627131011934493Saccharothrix espanaensis DSM 44229 complete genome3e-0661.9BLASTN svgBLASTP svg
NC_019940:28348502834850285310318254Thioflavicoccus mobilis 8321 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004578:48696734869673488861018938Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-0661.9BLASTN svgBLASTP svg