Query: NC_015275:3976631 Clostridium lentocellum DSM 5427 chromosome, complete genome
Start: 3976631, End: 3995748, Length: 19118
Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015275:3407358 | 3407358 | 3446431 | 39074 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 2e-87 | 331 | BLASTN svg | BLASTP svg |
| NC_012563:36000* | 36000 | 78599 | 42600 | Clostridium botulinum A2 str. Kyoto, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_010516:42475* | 42475 | 84207 | 41733 | Clostridium botulinum B1 str. Okra, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_014328:85290* | 85290 | 143875 | 58586 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_013316:3863728* | 3863728 | 3886144 | 22417 | Clostridium difficile R20291, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_008262:2649289* | 2649289 | 2704676 | 55388 | Clostridium perfringens SM101, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_010520:35845* | 35845 | 78599 | 42755 | Clostridium botulinum A3 str. Loch Maree, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_009089:3998347* | 3998347 | 4020740 | 22394 | Clostridium difficile 630, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_003366:2788268 | 2788268 | 2809686 | 21419 | Clostridium perfringens str. 13, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_008261:3014373* | 3014373 | 3032313 | 17941 | Clostridium perfringens ATCC 13124, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_008593:1917118* | 1917118 | 1965286 | 48169 | Clostridium novyi NT, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_004722:4405363* | 4405363 | 4437599 | 32237 | Bacillus cereus ATCC 14579, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_020291:2487575 | 2487575 | 2510688 | 23114 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_003997:4252000* | 4252000 | 4273561 | 21562 | Bacillus anthracis str. Ames, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_005945:4251789* | 4251789 | 4274060 | 22272 | Bacillus anthracis str. Sterne, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_006274:4295730* | 4295730 | 4319358 | 23629 | Bacillus cereus E33L, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_007530:4251773* | 4251773 | 4273688 | 21916 | Bacillus anthracis str. 'Ames Ancestor', complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_008600:4263505* | 4263505 | 4287344 | 23840 | Bacillus thuringiensis str. Al Hakam, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_012472:4255729* | 4255729 | 4296301 | 40573 | Bacillus cereus 03BB102, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_010003:528855 | 528855 | 555025 | 26171 | Petrotoga mobilis SJ95, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_010003:1746319 | 1746319 | 1768351 | 22033 | Petrotoga mobilis SJ95, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_004557:749330* | 749330 | 770099 | 20770 | Clostridium tetani E88, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_010184:4287999* | 4287999 | 4309603 | 21605 | Bacillus weihenstephanensis KBAB4, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_014335:4181710* | 4181710 | 4222648 | 40939 | Bacillus cereus biovar anthracis str. CI chromosome, complete | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_012440:1405879* | 1405879 | 1430585 | 24707 | Persephonella marina EX-H1, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_005957:4244019* | 4244019 | 4263144 | 19126 | Bacillus thuringiensis serovar konkukian str. 97-27, complete | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_003909:4209385* | 4209385 | 4232416 | 23032 | Bacillus cereus ATCC 10987, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014829:3305762* | 3305762 | 3328455 | 22694 | Bacillus cellulosilyticus DSM 2522 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |