Pre_GI: BLASTN Hits

Some Help

Query: NC_014323:4665610 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4665610, End: 4717103, Length: 51494

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010170:4196197*4196197422572429528Bordetella petrii, complete genome5e-105391BLASTN svgBLASTP svg
NC_002929:3305682*3305682333485129170Bordetella pertussis Tohama I, complete genome5e-102381BLASTN svgBLASTP svg
NC_002927:960369*96036999159931231Bordetella bronchiseptica RB50, complete genome8e-101377BLASTN svgBLASTP svg
NC_013446:45116024511602453459922998Comamonas testosteroni CNB-2, complete genome2e-92349BLASTN svgBLASTP svg
NC_010645:558974*55897458259923626Bordetella avium 197N, complete genome9e-76293BLASTN svgBLASTP svg
NC_012856:29319952931995295427722283Ralstonia pickettii 12D chromosome 1, complete genome5e-68268BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome5e-62248BLASTN svgBLASTP svg
NC_008825:84691684691687479727882Methylibium petroleiphilum PM1, complete genome5e-59238BLASTN svgBLASTP svg
NC_012660:21433762143376220316659791Pseudomonas fluorescens SBW25 chromosome, complete genome2e-55226BLASTN svgBLASTP svg
NC_008752:11193231119323114094021618Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-50210BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome1e-44190BLASTN svgBLASTP svg
NC_012660:819381*81938184312223742Pseudomonas fluorescens SBW25 chromosome, complete genome6e-43184BLASTN svgBLASTP svg
NC_009434:3434381*3434381346411529735Pseudomonas stutzeri A1501, complete genome5e-34155BLASTN svgBLASTP svg
NC_013859:42150042150044318021681Azospirillum sp. B510 plasmid pAB510e, complete sequence2e-33153BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome8e-33151BLASTN svgBLASTP svg
NC_012721:16864501686450170480118352Burkholderia glumae BGR1 chromosome 2, complete genome8e-33151BLASTN svgBLASTP svg
NC_020064:2697116*2697116272016423049Serratia marcescens FGI94, complete genome3e-32149BLASTN svgBLASTP svg
NC_007404:1964935*1964935200068635752Thiobacillus denitrificans ATCC 25259, complete genome1e-31147BLASTN svgBLASTP svg
NC_012969:2136243*2136243222535089108Methylovorus glucosetrophus SIP3-4 chromosome, complete genome5e-31145BLASTN svgBLASTP svg
NC_004578:1190000*1190000121945029451Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-31145BLASTN svgBLASTP svg
NC_014733:2095996*2095996211863222637Methylovorus sp. MP688 chromosome, complete genome3e-29139BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome5e-28135BLASTN svgBLASTP svg
NC_015161:758929*75892978593127003Deinococcus proteolyticus MRP chromosome, complete genome2e-27133BLASTN svgBLASTP svg
NC_012880:27787952778795280217023376Dickeya dadantii Ech703, complete genome1e-25127BLASTN svgBLASTP svg
NC_013508:1491945*1491945152068628742Edwardsiella tarda EIB202, complete genome2e-18103BLASTN svgBLASTP svg
NC_012803:17531381753138177628023143Micrococcus luteus NCTC 2665, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_013592:27033272703327272585222526Dickeya dadantii Ech586, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_014121:1589389*1589389162248733099Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-1695.6BLASTN svgBLASTP svg
NC_015259:73479573479576624731453Polymorphum gilvum SL003B-26A1 chromosome, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_001263:13786051378605140253323929Deinococcus radiodurans R1 chromosome 1, complete sequence2e-1593.7BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_021066:839734*83973487672436991Raoultella ornithinolytica B6, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_014500:2479814*2479814250755827745Dickeya dadantii 3937 chromosome, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_014210:14403614403616380119766Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-1179.8BLASTN svgBLASTP svg
NC_007963:2555012*2555012257573920728Chromohalobacter salexigens DSM 3043, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_011769:24720224720227380526604Desulfovibrio vulgaris str. 'Miyazaki F', complete genome4e-1075.8BLASTN svgBLASTP svg
NC_007643:4294818*4294818431506320246Rhodospirillum rubrum ATCC 11170, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_002932:296557*29655731908122525Chlorobium tepidum TLS, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_014541:475350*47535053312757778Ferrimonas balearica DSM 9799 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_008609:1394377*1394377141539521019Pelobacter propionicus DSM 2379, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_015663:3586836*3586836361030823473Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_006677:1255079*1255079128032225244Gluconobacter oxydans 621H, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_004547:2470978*2470978249481623839Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007626:69792669792672542027495Magnetospirillum magneticum AMB-1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_007958:396439*39643942143724999Rhodopseudomonas palustris BisB5, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_010067:11161481116148113933023183Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-0767.9BLASTN svgBLASTP svg
NC_015566:40490004049000406909920100Serratia sp. AS12 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_014532:11087511087513531724443Halomonas elongata DSM 2581, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_014375:21761221761224296425353Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_003198:1771432*1771432180593534504Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-0765.9BLASTN svgBLASTP svg
NC_010725:2589014*2589014261596126948Methylobacterium populi BJ001, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013716:1918664*1918664194320924546Citrobacter rodentium ICC168, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_020064:35175003517500354133523836Serratia marcescens FGI94, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_020302:10741201074120109337319254Corynebacterium halotolerans YIM 70093 = DSM 44683, complete2e-0663.9BLASTN svgBLASTP svg
NC_014910:29308602930860295129320434Alicycliphilus denitrificans BC chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_011149:31870223187022321200624985Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-0661.9BLASTN svgBLASTP svg
NC_010694:12508411250841127452923689Erwinia tasmaniensis, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_006511:3079512*3079512310454825037Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC6e-0661.9BLASTN svgBLASTP svg
NC_004631:3112043*3112043313711225070Salmonella enterica subsp. enterica serovar Typhi Ty2, complete6e-0661.9BLASTN svgBLASTP svg
NC_003198:3126548*3126548315161725070Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-0661.9BLASTN svgBLASTP svg