Pre_GI: BLASTN Hits

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Query: NC_013929:5135285 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5135285, End: 5172099, Length: 36815

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:5253923*5253923527688222960Streptomyces avermitilis MA-4680, complete genome02839BLASTN svgBLASTP svg
NC_003888:4251867*4251867430640654540Streptomyces coelicolor A3(2), complete genome02567BLASTN svgBLASTP svg
NC_018750:3964784*3964784398396119178Streptomyces venezuelae ATCC 10712, complete genome01362BLASTN svgBLASTP svg
NC_018750:3988196*3988196400732519130Streptomyces venezuelae ATCC 10712, complete genome01356BLASTN svgBLASTP svg
NC_021177:4041915*4041915406445922545Streptomyces fulvissimus DSM 40593, complete genome01316BLASTN svgBLASTP svg
NC_015953:3684065*3684065371159927535Streptomyces sp. SirexAA-E chromosome, complete genome01275BLASTN svgBLASTP svg
NC_014666:87598738759873878287423002Frankia sp. EuI1c chromosome, complete genome0710BLASTN svgBLASTP svg
NC_013595:10329633*103296331035599926367Streptosporangium roseum DSM 43021, complete genome0662BLASTN svgBLASTP svg
NC_013510:1*11865618656Thermomonospora curvata DSM 43183, complete genome9e-171609BLASTN svgBLASTP svg
NC_014210:5752651*5752651577999927349Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-143517BLASTN svgBLASTP svg
NC_013093:111124311243Actinosynnema mirum DSM 43827, complete genome4e-117430BLASTN svgBLASTP svg
NC_007333:3626510*3626510365399927490Thermobifida fusca YX, complete genome7e-116426BLASTN svgBLASTP svg
NC_007333:111820218202Thermobifida fusca YX, complete genome7e-116426BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-69272BLASTN svgBLASTP svg
NC_014151:4106624*4106624413399927376Cellulomonas flavigena DSM 20109 chromosome, complete genome6e-64254BLASTN svgBLASTP svg
NC_008578:2431074*2431074245799926926Acidothermus cellulolyticus 11B, complete genome5e-58234BLASTN svgBLASTP svg
NC_013521:4240468*4240468426799927532Sanguibacter keddieii DSM 10542, complete genome5e-55224BLASTN svgBLASTP svg
NC_014830:4012999*4012999403999927001Intrasporangium calvum DSM 43043 chromosome, complete genome3e-53218BLASTN svgBLASTP svg
NC_013174:27120002712000273803326034Jonesia denitrificans DSM 20603, complete genome8e-51210BLASTN svgBLASTP svg
NC_011886:4376261*4376261440799931739Arthrobacter chlorophenolicus A6, complete genome2e-39172BLASTN svgBLASTP svg
NC_002677:49104349104351327322231Mycobacterium leprae TN, complete genome1e-37167BLASTN svgBLASTP svg
NC_011896:49105249105251199220941Mycobacterium leprae Br4923, complete genome1e-37167BLASTN svgBLASTP svg
NC_008541:4679022*4679022470999930978Arthrobacter sp. FB24 chromosome 1, complete sequence6e-33151BLASTN svgBLASTP svg
NC_018531:4718904*4718904474449925596Arthrobacter sp. Rue61a chromosome, complete genome4e-28135BLASTN svgBLASTP svg
NC_008711:4579997*4579997460549925503Arthrobacter aurescens TC1, complete genome4e-28135BLASTN svgBLASTP svg
NC_003888:7561923*7561923764778785865Streptomyces coelicolor A3(2), complete genome6e-27131BLASTN svgBLASTP svg
NC_015145:4232283*4232283426249930217Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_008618:20001720001722396823952Bifidobacterium adolescentis ATCC 15703, complete genome1e-24123BLASTN svgBLASTP svg
NC_015125:1597600*1597600161635218753Microbacterium testaceum StLB037, complete genome3e-22115BLASTN svgBLASTP svg
NC_014318:369136912533921649Amycolatopsis mediterranei U32 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_014550:3839389*3839389387099931611Arthrobacter arilaitensis Re117, complete genome1e-18103BLASTN svgBLASTP svg
NC_006177:3549467*3549467357099921533Symbiobacterium thermophilum IAM 14863, complete genome1e-18103BLASTN svgBLASTP svg
NC_006087:111092810928Leifsonia xyli subsp. xyli str. CTCB07, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_007164:2446879*2446879247349926621Corynebacterium jeikeium K411, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_013967:1687825*1687825171504127217Haloferax volcanii DS2 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_015564:4727630*4727630475399926370Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014039:2479500*2479500250599926500Propionibacterium acnes SK137 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_006085:2544421*2544421257099926579Propionibacterium acnes KPA171202, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_012029:1604291*1604291162625321963Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008271:35909359096246126553Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_005125:11610001161000119835837359Gloeobacter violaceus PCC 7421, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_019974:2179000*2179000223109952100Natronococcus occultus SP4, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_015387:10029551002955103001227058Marinithermus hydrothermalis DSM 14884 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014211:43961143961146090921299Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmid3e-0765.9BLASTN svgBLASTP svg
NC_007925:4060635*4060635408822427590Rhodopseudomonas palustris BisB18, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014910:4316706*4316706434127124566Alicycliphilus denitrificans BC chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007626:46887774688777471078422008Magnetospirillum magneticum AMB-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010572:54450815445081548674141661Streptomyces griseus subsp. griseus NBRC 13350, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010816:1660066*1660066168402823963Bifidobacterium longum DJO10A, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014391:2579919*2579919261467434756Micromonospora aurantiaca ATCC 27029 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015052:2383865*2383865240599922135Bifidobacterium longum subsp. infantis 157F, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015067:2371428*2371428239399922572Bifidobacterium longum subsp. longum JCM 1217, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004307:1620500*1620500164011119612Bifidobacterium longum NCC2705, complete genome4e-0661.9BLASTN svgBLASTP svg