Pre_GI: BLASTN Hits

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Query: NC_011745:1581907 Escherichia coli ED1a chromosome, complete genome

Start: 1581907, End: 1604505, Length: 22599

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated in the 2000s from the faeces of a healthy man in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007946:15866561586656161278726132Escherichia coli UTI89, complete genome022610BLASTN svgBLASTP svg
NC_008563:15778791577879160172323845Escherichia coli APEC O1, complete genome022150BLASTN svgBLASTP svg
NC_004431:17131411713141173884125701Escherichia coli CFT073, complete genome018370BLASTN svgBLASTP svg
NC_011751:17141311714131174129427164Escherichia coli UMN026 chromosome, complete genome018060BLASTN svgBLASTP svg
NC_011750:18099431809943183281122869Escherichia coli IAI39 chromosome, complete genome013150BLASTN svgBLASTP svg
NC_010498:17004471700447171902918583Escherichia coli SMS-3-5, complete genome013100BLASTN svgBLASTP svg
AC_000091:15219761521976154430422329Escherichia coli W3110 DNA, complete genome010360BLASTN svgBLASTP svg
NC_000913:15170511517051154061423564Escherichia coli K12, complete genome010360BLASTN svgBLASTP svg
NC_010473:16076461607646163120923564Escherichia coli str. K-12 substr. DH10B, complete genome010360BLASTN svgBLASTP svg
NC_002655:20150002015000203595420955Escherichia coli O157:H7 EDL933, complete genome010240BLASTN svgBLASTP svg
NC_007384:17378851737885176063922755Shigella sonnei Ss046, complete genome010170BLASTN svgBLASTP svg
NC_002695:20565452056545207693920395Escherichia coli O157:H7 str. Sakai, complete genome08954BLASTN svgBLASTP svg
NC_011740:14947961494796152042525630Escherichia fergusonii ATCC 35469, complete genome08302BLASTN svgBLASTP svg
NC_008258:17846371784637180559020954Shigella flexneri 5 str. 8401, complete genome07812BLASTN svgBLASTP svg
NC_004337:17836451783645180635922715Shigella flexneri 2a str. 301, complete genome07781BLASTN svgBLASTP svg
NC_004741:18230001823000184104318044Shigella flexneri 2a str. 2457T, complete genome07781BLASTN svgBLASTP svg
CP002797:15910001591000160930018301Escherichia coli NA114, complete genome05414BLASTN svgBLASTP svg
NC_010468:2406387*2406387242509318707Escherichia coli ATCC 8739, complete genome04320BLASTN svgBLASTP svg
NC_007606:15154031515403153810522703Shigella dysenteriae Sd197, complete genome02874BLASTN svgBLASTP svg
NC_008563:258725*25872528280524081Escherichia coli APEC O1, complete genome02553BLASTN svgBLASTP svg
NC_007946:25874725874728282624080Escherichia coli UTI89, complete genome02553BLASTN svgBLASTP svg
NC_008253:25705925705928215125093Escherichia coli 536, complete genome02490BLASTN svgBLASTP svg
NC_011751:25683025683028052023691Escherichia coli UMN026 chromosome, complete genome02286BLASTN svgBLASTP svg
NC_020063:20772332077233210134824116Enterobacteriaceae bacterium strain FGI 57, complete genome0870BLASTN svgBLASTP svg
NC_020063:33525163352516337629223777Enterobacteriaceae bacterium strain FGI 57, complete genome0837BLASTN svgBLASTP svg
NC_020063:31040003104000312597921980Enterobacteriaceae bacterium strain FGI 57, complete genome0674BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome2e-112414BLASTN svgBLASTP svg
NC_014562:2563466*2563466261248449019Pantoea vagans C9-1 chromosome, complete genome1e-88335BLASTN svgBLASTP svg
NC_015968:2583721*2583721261035326633Enterobacter asburiae LF7a chromosome, complete genome6e-75289BLASTN svgBLASTP svg
NC_014500:26880952688095271328625192Dickeya dadantii 3937 chromosome, complete genome6e-72280BLASTN svgBLASTP svg
NC_013592:20591382059138209167632539Dickeya dadantii Ech586, complete genome1e-69272BLASTN svgBLASTP svg
NC_014532:21464662146466216923222767Halomonas elongata DSM 2581, complete genome2e-53218BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-48202BLASTN svgBLASTP svg
NC_011751:68041768041770234121925Escherichia coli UMN026 chromosome, complete genome4e-48200BLASTN svgBLASTP svg
NC_013716:37084153708415373077822364Citrobacter rodentium ICC168, complete genome7e-47196BLASTN svgBLASTP svg
NC_007384:17633751763375178359920225Shigella sonnei Ss046, complete genome3e-46194BLASTN svgBLASTP svg
NC_008321:26497812649781268071830938Shewanella sp. MR-4, complete genome2e-44188BLASTN svgBLASTP svg
AP010958:60471960471962691322195Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-43184BLASTN svgBLASTP svg
CP002185:79473279473281843123700Escherichia coli W, complete genome3e-43184BLASTN svgBLASTP svg
CU928160:25693225693227863921708Escherichia coli IAI1 chromosome, complete genome3e-43184BLASTN svgBLASTP svg
NC_010468:32093263209326323524825923Escherichia coli ATCC 8739, complete genome3e-43184BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome3e-43184BLASTN svgBLASTP svg
NC_002695:26123526123528377222538Escherichia coli O157:H7 str. Sakai, complete genome1e-42182BLASTN svgBLASTP svg
NC_002655:26123626123628140820173Escherichia coli O157:H7 EDL933, complete genome1e-42182BLASTN svgBLASTP svg
NC_008322:27166762716676274827431599Shewanella sp. MR-7, complete genome4e-42180BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome4e-42180BLASTN svgBLASTP svg
NC_007384:27881027881029760818799Shigella sonnei Ss046, complete genome2e-41178BLASTN svgBLASTP svg
NC_002516:4321000*4321000434209921100Pseudomonas aeruginosa PAO1, complete genome6e-41176BLASTN svgBLASTP svg
NC_016002:2825017*2825017284854323527Pseudogulbenkiania sp. NH8B, complete genome4e-30141BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome3e-27131BLASTN svgBLASTP svg
NC_013166:14097901409790143362423835Kangiella koreensis DSM 16069, complete genome5e-26127BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-25125BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome5e-23117BLASTN svgBLASTP svg
NC_014500:1066911*1066911109884731937Dickeya dadantii 3937 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_013508:275081*27508130064325563Edwardsiella tarda EIB202, complete genome5e-20107BLASTN svgBLASTP svg
NC_012779:261438*26143828632424887Edwardsiella ictaluri 93-146, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013592:956829*95682998781830990Dickeya dadantii Ech586, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_014837:38786838786841433626469Pantoea sp. At-9b chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009792:4017510*4017510404823430725Citrobacter koseri ATCC BAA-895, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014228:34421593442159346772325565Xenorhabdus nematophila ATCC 19061, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014228:33538963353896338544531550Xenorhabdus nematophila ATCC 19061, complete genome3e-0661.9BLASTN svgBLASTP svg