Query: NC_011035:1348659 Neisseria gonorrhoeae NCCP11945 chromosome, complete genome
Start: 1348659, End: 1375071, Length: 26413
Host Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria
General Information: Neisseria gonorrhoeae NCCP11945 was isolated in 2002 from a vaginal smear of a Korean patient. This is a multidrug-resistant strain. One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. Pathogenic functions include the antigenically variable type IV pilus and the opacity (Opa) proteins. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_002946:1342857 | 1342857 | 1365099 | 22243 | Neisseria gonorrhoeae FA 1090, complete genome | 0 | 22490 | BLASTN svg | BLASTP svg |
NC_002946:1556000* | 1556000 | 1578312 | 22313 | Neisseria gonorrhoeae FA 1090, complete genome | 0 | 5396 | BLASTN svg | BLASTP svg |
NC_003116:755666 | 755666 | 774551 | 18886 | Neisseria meningitidis Z2491, complete genome | 0 | 3778 | BLASTN svg | BLASTP svg |
NC_008767:549351* | 549351 | 568397 | 19047 | Neisseria meningitidis FAM18, complete genome | 0 | 3733 | BLASTN svg | BLASTP svg |
NC_003112:603879* | 603879 | 627130 | 23252 | Neisseria meningitidis MC58, complete genome | 0 | 3721 | BLASTN svg | BLASTP svg |
NC_008767:1829500* | 1829500 | 1853167 | 23668 | Neisseria meningitidis FAM18, complete genome | 0 | 3671 | BLASTN svg | BLASTP svg |
NC_003112:364869 | 364869 | 385165 | 20297 | Neisseria meningitidis MC58, complete genome | 0 | 3628 | BLASTN svg | BLASTP svg |
NC_010120:1814592* | 1814592 | 1836774 | 22183 | Neisseria meningitidis 053442, complete genome | 0 | 3578 | BLASTN svg | BLASTP svg |
NC_003116:2063500* | 2063500 | 2083689 | 20190 | Neisseria meningitidis Z2491, complete genome | 0 | 3533 | BLASTN svg | BLASTP svg |
NC_010120:609323* | 609323 | 637032 | 27710 | Neisseria meningitidis 053442, complete genome | 0 | 3527 | BLASTN svg | BLASTP svg |
NC_003112:673772* | 673772 | 695164 | 21393 | Neisseria meningitidis MC58, complete genome | 0 | 3104 | BLASTN svg | BLASTP svg |
NC_008767:613394* | 613394 | 639893 | 26500 | Neisseria meningitidis FAM18, complete genome | 0 | 3065 | BLASTN svg | BLASTP svg |
NC_003112:1423528 | 1423528 | 1455188 | 31661 | Neisseria meningitidis MC58, complete genome | 0 | 846 | BLASTN svg | BLASTP svg |
NC_008767:804655* | 804655 | 825787 | 21133 | Neisseria meningitidis FAM18, complete genome | 0 | 815 | BLASTN svg | BLASTP svg |
NC_008767:1321129* | 1321129 | 1347438 | 26310 | Neisseria meningitidis FAM18, complete genome | 0 | 807 | BLASTN svg | BLASTP svg |
NC_008767:2160000* | 2160000 | 2182371 | 22372 | Neisseria meningitidis FAM18, complete genome | 0 | 805 | BLASTN svg | BLASTP svg |
NC_010120:1313500 | 1313500 | 1331238 | 17739 | Neisseria meningitidis 053442, complete genome | 0 | 799 | BLASTN svg | BLASTP svg |
NC_003116:1018813* | 1018813 | 1041636 | 22824 | Neisseria meningitidis Z2491, complete genome | 0 | 791 | BLASTN svg | BLASTP svg |
NC_003116:1518110* | 1518110 | 1541478 | 23369 | Neisseria meningitidis Z2491, complete genome | 3e-173 | 617 | BLASTN svg | BLASTP svg |
NC_014752:197000* | 197000 | 227356 | 30357 | Neisseria lactamica ST-640, complete genome | 6e-165 | 589 | BLASTN svg | BLASTP svg |
NC_008767:1888950* | 1888950 | 1910666 | 21717 | Neisseria meningitidis FAM18, complete genome | 3e-46 | 194 | BLASTN svg | BLASTP svg |
NC_010120:1065833 | 1065833 | 1094117 | 28285 | Neisseria meningitidis 053442, complete genome | 5e-36 | 161 | BLASTN svg | BLASTP svg |
NC_010512:1015557 | 1015557 | 1045221 | 29665 | Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_021150:1627347 | 1627347 | 1651948 | 24602 | Azotobacter vinelandii CA6, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015138:2364500* | 2364500 | 2383817 | 19318 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_012560:1627334 | 1627334 | 1645856 | 18523 | Azotobacter vinelandii DJ, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_006513:1379735* | 1379735 | 1462184 | 82450 | Azoarcus sp. EbN1, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014752:98117* | 98117 | 127099 | 28983 | Neisseria lactamica ST-640, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014541:4167916 | 4167916 | 4192497 | 24582 | Ferrimonas balearica DSM 9799 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013416:820989* | 820989 | 845924 | 24936 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010120:2098000* | 2098000 | 2127398 | 29399 | Neisseria meningitidis 053442, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008767:2126854* | 2126854 | 2157111 | 30258 | Neisseria meningitidis FAM18, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003116:291661* | 291661 | 316929 | 25269 | Neisseria meningitidis Z2491, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003112:2215184* | 2215184 | 2248030 | 32847 | Neisseria meningitidis MC58, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_002946:1935186* | 1935186 | 1958675 | 23490 | Neisseria gonorrhoeae FA 1090, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_002946:1020175 | 1020175 | 1064993 | 44819 | Neisseria gonorrhoeae FA 1090, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |