Pre_GI: BLASTN Hits

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Query: NC_011004:4947980 Rhodopseudomonas palustris TIE-1, complete genome

Start: 4947980, End: 4970583, Length: 22604

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_005296:45742134574213461698142769Rhodopseudomonas palustris CGA009, complete genome017400BLASTN svgBLASTP svg
NC_021150:4311902*4311902433613524234Azotobacter vinelandii CA6, complete genome5e-137496BLASTN svgBLASTP svg
NC_012560:4311906*4311906433613924234Azotobacter vinelandii DJ, complete genome5e-137496BLASTN svgBLASTP svg
NC_011992:1505106*1505106152858323478Acidovorax ebreus TPSY, complete genome1e-134488BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome3e-129470BLASTN svgBLASTP svg
NC_010524:3094303*3094303311453120229Leptothrix cholodnii SP-6, complete genome5e-125456BLASTN svgBLASTP svg
NC_015422:28068322806832284558938758Alicycliphilus denitrificans K601 chromosome, complete genome4e-119436BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome3e-117430BLASTN svgBLASTP svg
NC_009720:41242554124255415127427020Xanthobacter autotrophicus Py2, complete genome3e-101377BLASTN svgBLASTP svg
NC_004129:957890*95789098009922210Pseudomonas fluorescens Pf-5, complete genome8e-99369BLASTN svgBLASTP svg
NC_011146:22001422200142224285442713Geobacter bemidjiensis Bem, complete genome6e-75289BLASTN svgBLASTP svg
NC_011751:12000*120003835526356Escherichia coli UMN026 chromosome, complete genome2e-65258BLASTN svgBLASTP svg
NC_011750:12047*120474221230166Escherichia coli IAI39 chromosome, complete genome3e-64254BLASTN svgBLASTP svg
NC_007947:79745679745682317625721Methylobacillus flagellatus KT, complete genome1e-57232BLASTN svgBLASTP svg
NC_012850:45931545931548320123887Rhizobium leguminosarum bv. trifolii WSM1325, complete genome2e-56228BLASTN svgBLASTP svg
NC_011748:11394*113943596224569Escherichia coli 55989, complete genome1e-51212BLASTN svgBLASTP svg
NC_002678:3210751*3210751323209921349Mesorhizobium loti MAFF303099, complete genome1e-51212BLASTN svgBLASTP svg
CU928145:11394*113943596224569Escherichia coli 55989 chromosome, complete genome1e-51212BLASTN svgBLASTP svg
NC_014923:59701825970182600283732656Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete5e-51210BLASTN svgBLASTP svg
NC_015675:65385006538500655750519006Mesorhizobium opportunistum WSM2075 chromosome, complete genome5e-51210BLASTN svgBLASTP svg
NC_019973:5899142*5899142593179432653Mesorhizobium australicum WSM2073, complete genome5e-51210BLASTN svgBLASTP svg
NC_009800:12162*121623729725136Escherichia coli HS, complete genome3e-49204BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome3e-49204BLASTN svgBLASTP svg
CU928160:11381*113813595024570Escherichia coli IAI1 chromosome, complete genome3e-49204BLASTN svgBLASTP svg
CP002185:11921*119213722925309Escherichia coli W, complete genome3e-49204BLASTN svgBLASTP svg
NC_014972:10351241035124106227327150Desulfobulbus propionicus DSM 2032 chromosome, complete genome1e-48202BLASTN svgBLASTP svg
NC_008278:50538995053899508662732729Frankia alni ACN14a, complete genome1e-39172BLASTN svgBLASTP svg
NC_014216:1061265*1061265108505223788Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_014836:155924*15592417823722314Desulfurispirillum indicum S5 chromosome, complete genome6e-38167BLASTN svgBLASTP svg
NC_004310:508483*50848353488526403Brucella suis 1330 chromosome I, complete sequence2e-37165BLASTN svgBLASTP svg
NC_006932:531000*53100055709926100Brucella abortus biovar 1 str. 9-941 chromosome I, complete2e-37165BLASTN svgBLASTP svg
NC_007618:52640052640055279626397Brucella melitensis biovar Abortus 2308 chromosome I, complete2e-37165BLASTN svgBLASTP svg
NC_010169:527500*52750055287125372Brucella suis ATCC 23445 chromosome I, complete sequence2e-37165BLASTN svgBLASTP svg
NC_010742:529500*52950055481725318Brucella abortus S19 chromosome 1, complete sequence2e-37165BLASTN svgBLASTP svg
NC_015857:531314*53131455683525522Brucella pinnipedialis B2/94 chromosome chromosome 1, complete2e-37165BLASTN svgBLASTP svg
NC_010581:29439132943913296366019748Beijerinckia indica subsp. indica ATCC 9039, complete genome1e-36163BLASTN svgBLASTP svg
NC_010103:507482*50748253233624855Brucella canis ATCC 23365 chromosome I, complete sequence6e-35157BLASTN svgBLASTP svg
NC_001263:66266666266668995627291Deinococcus radiodurans R1 chromosome 1, complete sequence3e-27131BLASTN svgBLASTP svg
NC_015389:2030154*2030154207584945696Coriobacterium glomerans PW2 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_020126:58494835849483587209922617Myxococcus stipitatus DSM 14675, complete genome2e-22115BLASTN svgBLASTP svg
NC_002505:2537655*2537655256310125447Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete2e-22115BLASTN svgBLASTP svg
NC_007958:830000*83000086140231403Rhodopseudomonas palustris BisB5, complete genome3e-18101BLASTN svgBLASTP svg
NC_013124:17841171784117180777323657Acidimicrobium ferrooxidans DSM 10331, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009074:2914053*2914053293925825206Burkholderia pseudomallei 668 chromosome I, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_011666:16019831601983162289320911Methylocella silvestris BL2, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_013169:12900001290000131283622837Kytococcus sedentarius DSM 20547, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015161:523278*52327854807924802Deinococcus proteolyticus MRP chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010943:24228382422838245809935262Stenotrophomonas maltophilia K279a, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015675:64934446493444653829644853Mesorhizobium opportunistum WSM2075 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010557:20784620784622851620671Burkholderia ambifaria MC40-6 chromosome 3, complete sequence7e-1383.8BLASTN svgBLASTP svg
NC_015942:10475761047576107197424399Acidithiobacillus ferrivorans SS3 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015376:11850001185000120456219563Burkholderia gladioli BSR3 chromosome chromosome 2, complete3e-1281.8BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007626:69792669792672542027495Magnetospirillum magneticum AMB-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008570:2014151*2014151204014925999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007907:45616445616447759921436Desulfitobacterium hafniense Y51, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_002696:2941644*2941644296461322970Caulobacter crescentus CB15, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002935:1315019*1315019137072155703Corynebacterium diphtheriae NCTC 13129, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007626:959684*959684100429644613Magnetospirillum magneticum AMB-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011071:22073852207385223164424260Stenotrophomonas maltophilia R551-3, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012808:1220378*1220378126948449107Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012808:37118063711806373409922294Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012808:38977513897751392263924889Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012808:39729833972983399542222440Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012808:420334*42033444610925776Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014972:37716423771642379462522984Desulfobulbus propionicus DSM 2032 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012811:41077641077643723726462Methylobacterium extorquens AM1 megaplasmid, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_012811:11053951105395112959924205Methylobacterium extorquens AM1 megaplasmid, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012808:806432*80643283135724926Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012808:48777034877703489559917897Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012808:4235567*4235567425812622560Methylobacterium extorquens AM1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007722:21720002172000219518323184Erythrobacter litoralis HTCC2594, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007722:16893716893719928730351Erythrobacter litoralis HTCC2594, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007626:10910001091000111043819439Magnetospirillum magneticum AMB-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010002:33577523357752338379626045Delftia acidovorans SPH-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008786:1936626*1936626196111324488Verminephrobacter eiseniae EF01-2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003078:67100067100071995348954Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_014210:5752651*5752651577999927349Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_015422:3836911*3836911386031223402Alicycliphilus denitrificans K601 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008752:32176953217695323954921855Acidovorax avenae subsp. citrulli AAC00-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010337:14455121445512146809922588Heliobacterium modesticaldum Ice1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011144:10739441073944109429420351Phenylobacterium zucineum HLK1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011144:26742422674242270317628935Phenylobacterium zucineum HLK1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011144:2710876*2710876272938418509Phenylobacterium zucineum HLK1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013501:176073*17607320175825686Rhodothermus marinus DSM 4252, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008358:79839079839083934340954Hyphomonas neptunium ATCC 15444, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011770:2499432*2499432255697257541Pseudomonas aeruginosa LESB58, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011770:49241274924127497209947973Pseudomonas aeruginosa LESB58, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013205:23321742332174235414821975Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,3e-0661.9BLASTN svgBLASTP svg
NC_015434:26577812657781268051822738Verrucosispora maris AB-18-032 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015593:2553500*2553500259301139512Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete3e-0661.9BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome3e-0661.9BLASTN svgBLASTP svg