Pre_GI: BLASTN Hits

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Query: NC_010498:4072681 Escherichia coli SMS-3-5, complete genome

Start: 4072681, End: 4096853, Length: 24173

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008253:3941938*3941938399883856901Escherichia coli 536, complete genome010880BLASTN svgBLASTP svg
NC_011740:448000*44800047065722658Escherichia fergusonii ATCC 35469, complete genome010450BLASTN svgBLASTP svg
NC_010468:1130000*1130000115350023501Escherichia coli ATCC 8739, complete genome08853BLASTN svgBLASTP svg
NC_010468:49074*490746937320300Escherichia coli ATCC 8739, complete genome08843BLASTN svgBLASTP svg
NC_007613:4217557*4217557425611838562Shigella boydii Sb227, complete genome08106BLASTN svgBLASTP svg
NC_004431:4270305*4270305431798947685Escherichia coli CFT073, complete genome07422BLASTN svgBLASTP svg
CP002516:44744*447447499130248Escherichia coli KO11, complete genome07402BLASTN svgBLASTP svg
CP002185:4035502*4035502406409928598Escherichia coli W, complete genome07402BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome07325BLASTN svgBLASTP svg
NC_011750:43900004390000444275952760Escherichia coli IAI39 chromosome, complete genome06698BLASTN svgBLASTP svg
NC_011751:4293966*4293966431867224707Escherichia coli UMN026 chromosome, complete genome06238BLASTN svgBLASTP svg
NC_002695:45841774584177463575951583Escherichia coli O157:H7 str. Sakai, complete genome03316BLASTN svgBLASTP svg
NC_002655:46531604653160470328250123Escherichia coli O157:H7 EDL933, complete genome03316BLASTN svgBLASTP svg
NC_003198:4676536*4676536471603539500Salmonella enterica subsp. enterica serovar Typhi str. CT18,01546BLASTN svgBLASTP svg
NC_004631:4661000*4661000468421223213Salmonella enterica subsp. enterica serovar Typhi Ty2, complete01538BLASTN svgBLASTP svg
NC_014121:677799*67779969989822100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01415BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome01201BLASTN svgBLASTP svg
NC_003198:3881221*3881221390454423324Salmonella enterica subsp. enterica serovar Typhi str. CT18,01189BLASTN svgBLASTP svg
NC_011149:3863913*3863913388509921187Salmonella enterica subsp. enterica serovar Agona str. SL483,01150BLASTN svgBLASTP svg
NC_015968:74124*7412410053226409Enterobacter asburiae LF7a chromosome, complete genome01136BLASTN svgBLASTP svg
NC_006511:44654954465495449196526471Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC01063BLASTN svgBLASTP svg
NC_011080:28704282870428289413023703Salmonella enterica subsp. enterica serovar Newport str. SL254,01033BLASTN svgBLASTP svg
NC_021066:53421275342127536560823482Raoultella ornithinolytica B6, complete genome01011BLASTN svgBLASTP svg
NC_015663:1356982*1356982138951032529Enterobacter aerogenes KCTC 2190 chromosome, complete genome0969BLASTN svgBLASTP svg
NC_013508:31889783188978324937660399Edwardsiella tarda EIB202, complete genome0952BLASTN svgBLASTP svg
NC_013508:2870954*2870954288859917646Edwardsiella tarda EIB202, complete genome0908BLASTN svgBLASTP svg
NC_010102:28621782862178288012617949Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,0813BLASTN svgBLASTP svg
NC_013508:35930003593000361400721008Edwardsiella tarda EIB202, complete genome0785BLASTN svgBLASTP svg
NC_014306:43760124376012441784741836Erwinia billingiae Eb661, complete genome2e-90341BLASTN svgBLASTP svg
NC_009792:46931524693152471999926848Citrobacter koseri ATCC BAA-895, complete genome1e-88335BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome2e-78301BLASTN svgBLASTP svg
NC_013956:32733403273340330380130462Pantoea ananatis LMG 20103 chromosome, complete genome4e-70274BLASTN svgBLASTP svg
NC_002655:30194030194032759925660Escherichia coli O157:H7 EDL933, complete genome3e-58234BLASTN svgBLASTP svg
NC_002695:30193930193932873026792Escherichia coli O157:H7 str. Sakai, complete genome3e-58234BLASTN svgBLASTP svg
NC_012917:83372183372187179538075Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-54222BLASTN svgBLASTP svg
NC_020211:103371*10337112946526095Serratia marcescens WW4, complete genome5e-48200BLASTN svgBLASTP svg
NC_011080:47032664703266472876525500Salmonella enterica subsp. enterica serovar Newport str. SL254,7e-44186BLASTN svgBLASTP svg
NC_009778:56700056700060530938310Enterobacter sakazakii ATCC BAA-894, complete genome3e-43184BLASTN svgBLASTP svg
NC_015061:12519051251905128092529021Rahnella sp. Y9602 chromosome, complete genome2e-41178BLASTN svgBLASTP svg
NC_012917:3684840*3684840370871823879Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-38168BLASTN svgBLASTP svg
NC_014837:33014*330146044127428Pantoea sp. At-9b chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_015224:44261674426167445165025484Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-33153BLASTN svgBLASTP svg
NC_020064:79422*7942212524145820Serratia marcescens FGI94, complete genome1e-33153BLASTN svgBLASTP svg
NC_010465:62348*6234810809945752Yersinia pseudotuberculosis YPIII, complete genome4e-33151BLASTN svgBLASTP svg
NC_008150:4634695*4634695465646621772Yersinia pestis Antiqua, complete genome2e-32149BLASTN svgBLASTP svg
NC_015567:69190*691909503025841Serratia sp. AS9 chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_015566:69190*691909503025841Serratia sp. AS12 chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_009832:110239*11023913543725199Serratia proteamaculans 568, complete genome1e-30143BLASTN svgBLASTP svg
NC_020211:996497*996497103223335737Serratia marcescens WW4, complete genome9e-28133BLASTN svgBLASTP svg
NC_005126:14250014250016059218093Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-22115BLASTN svgBLASTP svg
NC_019897:1577015*1577015161988642872Thermobacillus composti KWC4 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_004347:10396710396712630222336Shewanella oneidensis MR-1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007712:28970002897000291516418165Sodalis glossinidius str. 'morsitans', complete genome8e-1383.8BLASTN svgBLASTP svg
NC_012779:29570002957000298403927040Edwardsiella ictaluri 93-146, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013850:26858352685835271732531491Klebsiella variicola At-22 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009801:995396995396101946824073Escherichia coli E24377A, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009778:29512072951207297908827882Enterobacter sakazakii ATCC BAA-894, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020181:96959996959999375524157Enterobacter aerogenes EA1509E, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015663:44479844447984447024622263Enterobacter aerogenes KCTC 2190 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013592:446092*44609246819222101Dickeya dadantii Ech586, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_020181:51825685182568520953926972Enterobacter aerogenes EA1509E, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007712:38060003806000383079624797Sodalis glossinidius str. 'morsitans', complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007712:17200017200019101619017Sodalis glossinidius str. 'morsitans', complete genome7e-0763.9BLASTN svgBLASTP svg
NC_005126:5188976*5188976521454825573Photorhabdus luminescens subsp. laumondii TTO1, complete genome3e-0661.9BLASTN svgBLASTP svg