Query: NC_010498:3488513 Escherichia coli SMS-3-5, complete genome
Start: 3488513, End: 3508501, Length: 19989
Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_002695:3994970* | 3994970 | 4018099 | 23130 | Escherichia coli O157:H7 str. Sakai, complete genome | 0 | 35790 | BLASTN svg | BLASTP svg |
NC_011751:3710786 | 3710786 | 3735134 | 24349 | Escherichia coli UMN026 chromosome, complete genome | 0 | 20930 | BLASTN svg | BLASTP svg |
NC_011750:3768692* | 3768692 | 3793038 | 24347 | Escherichia coli IAI39 chromosome, complete genome | 0 | 20800 | BLASTN svg | BLASTP svg |
CP002516:613462* | 613462 | 631690 | 18229 | Escherichia coli KO11, complete genome | 0 | 20650 | BLASTN svg | BLASTP svg |
CP002185:3475991* | 3475991 | 3500052 | 24062 | Escherichia coli W, complete genome | 0 | 20630 | BLASTN svg | BLASTP svg |
CU928145:3608917* | 3608917 | 3632768 | 23852 | Escherichia coli 55989 chromosome, complete genome | 0 | 20630 | BLASTN svg | BLASTP svg |
NC_011748:3608917* | 3608917 | 3632768 | 23852 | Escherichia coli 55989, complete genome | 0 | 20630 | BLASTN svg | BLASTP svg |
NC_010473:3354052* | 3354052 | 3377599 | 23548 | Escherichia coli str. K-12 substr. DH10B, complete genome | 0 | 20160 | BLASTN svg | BLASTP svg |
NC_000913:3256307* | 3256307 | 3278216 | 21910 | Escherichia coli K12, complete genome | 0 | 20160 | BLASTN svg | BLASTP svg |
CU928160:3344746* | 3344746 | 3363099 | 18354 | Escherichia coli IAI1 chromosome, complete genome | 0 | 20110 | BLASTN svg | BLASTP svg |
NC_010468:613812 | 613812 | 633881 | 20070 | Escherichia coli ATCC 8739, complete genome | 0 | 20090 | BLASTN svg | BLASTP svg |
NC_009800:3307123* | 3307123 | 3325473 | 18351 | Escherichia coli HS, complete genome | 0 | 20060 | BLASTN svg | BLASTP svg |
NC_004741:3240909* | 3240909 | 3262366 | 21458 | Shigella flexneri 2a str. 2457T, complete genome | 0 | 19940 | BLASTN svg | BLASTP svg |
NC_004337:3249791 | 3249791 | 3272837 | 23047 | Shigella flexneri 2a str. 301, complete genome | 0 | 19930 | BLASTN svg | BLASTP svg |
NC_008258:3224721 | 3224721 | 3247194 | 22474 | Shigella flexneri 5 str. 8401, complete genome | 0 | 19930 | BLASTN svg | BLASTP svg |
NC_010658:3014371* | 3014371 | 3032599 | 18229 | Shigella boydii CDC 3083-94, complete genome | 0 | 17690 | BLASTN svg | BLASTP svg |
NC_009801:3595001 | 3595001 | 3613599 | 18599 | Escherichia coli E24377A, complete genome | 0 | 16740 | BLASTN svg | BLASTP svg |
AC_000091:3258377* | 3258377 | 3281480 | 23104 | Escherichia coli W3110 DNA, complete genome | 0 | 15770 | BLASTN svg | BLASTP svg |
NC_007613:2981829 | 2981829 | 3004385 | 22557 | Shigella boydii Sb227, complete genome | 0 | 15000 | BLASTN svg | BLASTP svg |
NC_007946:1073135 | 1073135 | 1098599 | 25465 | Escherichia coli UTI89, complete genome | 0 | 975 | BLASTN svg | BLASTP svg |
NC_004431:1119700 | 1119700 | 1151208 | 31509 | Escherichia coli CFT073, complete genome | 0 | 969 | BLASTN svg | BLASTP svg |
NC_007712:1601499 | 1601499 | 1632926 | 31428 | Sodalis glossinidius str. 'morsitans', complete genome | 3e-144 | 519 | BLASTN svg | BLASTP svg |
NC_015061:4286000 | 4286000 | 4312312 | 26313 | Rahnella sp. Y9602 chromosome, complete genome | 8e-139 | 502 | BLASTN svg | BLASTP svg |
NC_009801:995396 | 995396 | 1019468 | 24073 | Escherichia coli E24377A, complete genome | 8e-136 | 492 | BLASTN svg | BLASTP svg |
NC_005810:4306716 | 4306716 | 4330587 | 23872 | Yersinia pestis biovar Microtus str. 91001, complete genome | 1e-134 | 488 | BLASTN svg | BLASTP svg |
NC_018419:862500 | 862500 | 886099 | 23600 | Secondary endosymbiont of Ctenarytaina eucalypti chromosome, | 9e-80 | 305 | BLASTN svg | BLASTP svg |
NC_008228:816000 | 816000 | 839189 | 23190 | Pseudoalteromonas atlantica T6c, complete genome | 2e-44 | 188 | BLASTN svg | BLASTP svg |
NC_013508:2356865* | 2356865 | 2388599 | 31735 | Edwardsiella tarda EIB202, complete genome | 2e-43 | 184 | BLASTN svg | BLASTP svg |
NC_020064:1611820* | 1611820 | 1635185 | 23366 | Serratia marcescens FGI94, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_012779:2424967* | 2424967 | 2449599 | 24633 | Edwardsiella ictaluri 93-146, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_013960:489616 | 489616 | 511783 | 22168 | Nitrosococcus halophilus Nc4 chromosome, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_012560:1260031* | 1260031 | 1292431 | 32401 | Azotobacter vinelandii DJ, complete genome | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_007645:6013242* | 6013242 | 6037210 | 23969 | Hahella chejuensis KCTC 2396, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009654:2958316* | 2958316 | 2988385 | 30070 | Marinomonas sp. MWYL1, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_009831:2045811 | 2045811 | 2069133 | 23323 | Shewanella sediminis HAW-EB3, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_013209:2032500* | 2032500 | 2055746 | 23247 | Acetobacter pasteurianus IFO 3283-01, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_012779:957558 | 957558 | 983060 | 25503 | Edwardsiella ictaluri 93-146, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_021182:2219286* | 2219286 | 2242150 | 22865 | Clostridium pasteurianum BC1, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012483:2338392 | 2338392 | 2362698 | 24307 | Acidobacterium capsulatum ATCC 51196, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_004347:3028000 | 3028000 | 3050217 | 22218 | Shewanella oneidensis MR-1, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008536:5192235* | 5192235 | 5215206 | 22972 | Solibacter usitatus Ellin6076, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013093:2633000* | 2633000 | 2690980 | 57981 | Actinosynnema mirum DSM 43827, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015711:8852850* | 8852850 | 8876099 | 23250 | Myxococcus fulvus HW-1 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_020063:4170464 | 4170464 | 4193921 | 23458 | Enterobacteriaceae bacterium strain FGI 57, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015638:591964* | 591964 | 611558 | 19595 | Lacinutrix sp. 5H-3-7-4 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003911:3864852* | 3864852 | 3898296 | 33445 | Silicibacter pomeroyi DSS-3, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |