Query: NC_009831:3092126 Shewanella sediminis HAW-EB3, complete genome
Start: 3092126, End: 3113326, Length: 21201
Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010334:3040589 | 3040589 | 3063150 | 22562 | Shewanella halifaxensis HAW-EB4, complete genome | 0 | 4781 | BLASTN svg | BLASTP svg |
NC_009052:2683447* | 2683447 | 2705099 | 21653 | Shewanella baltica OS155, complete genome | 0 | 3178 | BLASTN svg | BLASTP svg |
NC_009997:2967521* | 2967521 | 2988992 | 21472 | Shewanella baltica OS195, complete genome | 8e-99 | 369 | BLASTN svg | BLASTP svg |
NC_009901:3563264 | 3563264 | 3584099 | 20836 | Shewanella pealeana ATCC 700345, complete genome | 1e-85 | 325 | BLASTN svg | BLASTP svg |
NC_009092:2902171* | 2902171 | 2930494 | 28324 | Shewanella loihica PV-4, complete genome | 4e-79 | 303 | BLASTN svg | BLASTP svg |
NC_014012:3356629 | 3356629 | 3374599 | 17971 | Shewanella violacea DSS12, complete genome | 2e-44 | 188 | BLASTN svg | BLASTP svg |
NC_009092:1989977 | 1989977 | 2018545 | 28569 | Shewanella loihica PV-4, complete genome | 1e-42 | 182 | BLASTN svg | BLASTP svg |
NC_009052:4437649* | 4437649 | 4461344 | 23696 | Shewanella baltica OS155, complete genome | 9e-34 | 153 | BLASTN svg | BLASTP svg |
NC_009997:2069894 | 2069894 | 2091599 | 21706 | Shewanella baltica OS195, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_008750:450233 | 450233 | 470099 | 19867 | Shewanella sp. W3-18-1, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_007954:2440000* | 2440000 | 2463255 | 23256 | Shewanella denitrificans OS217, complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
NC_010334:2131939* | 2131939 | 2158482 | 26544 | Shewanella halifaxensis HAW-EB4, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_009092:2644164 | 2644164 | 2669291 | 25128 | Shewanella loihica PV-4, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_008345:4107847 | 4107847 | 4137958 | 30112 | Shewanella frigidimarina NCIMB 400, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_009052:1899954 | 1899954 | 1923389 | 23436 | Shewanella baltica OS155, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_004347:4211241* | 4211241 | 4236439 | 25199 | Shewanella oneidensis MR-1, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_009778:1141716 | 1141716 | 1173365 | 31650 | Enterobacter sakazakii ATCC BAA-894, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007005:3684099* | 3684099 | 3708989 | 24891 | Pseudomonas syringae pv. syringae B728a, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009092:3682413 | 3682413 | 3701943 | 19531 | Shewanella loihica PV-4, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009092:3239500 | 3239500 | 3261290 | 21791 | Shewanella loihica PV-4, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008322:2983951 | 2983951 | 3006712 | 22762 | Shewanella sp. MR-7, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008321:2922000 | 2922000 | 2944099 | 22100 | Shewanella sp. MR-4, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007951:769500 | 769500 | 796720 | 27221 | Burkholderia xenovorans LB400 chromosome 1, complete sequence | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009092:1047500* | 1047500 | 1072729 | 25230 | Shewanella loihica PV-4, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013282:2827757 | 2827757 | 2860603 | 32847 | Cronobacter turicensis, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_020260:1184174 | 1184174 | 1214846 | 30673 | Cronobacter sakazakii Sp291, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010506:5155951 | 5155951 | 5179245 | 23295 | Shewanella woodyi ATCC 51908, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_009092:261778 | 261778 | 284599 | 22822 | Shewanella loihica PV-4, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_009092:2529518 | 2529518 | 2552506 | 22989 | Shewanella loihica PV-4, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |