Pre_GI: BLASTN Hits

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Query: NC_009831:3092126 Shewanella sediminis HAW-EB3, complete genome

Start: 3092126, End: 3113326, Length: 21201

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010334:30405893040589306315022562Shewanella halifaxensis HAW-EB4, complete genome04781BLASTN svgBLASTP svg
NC_009052:2683447*2683447270509921653Shewanella baltica OS155, complete genome03178BLASTN svgBLASTP svg
NC_009997:2967521*2967521298899221472Shewanella baltica OS195, complete genome8e-99369BLASTN svgBLASTP svg
NC_009901:35632643563264358409920836Shewanella pealeana ATCC 700345, complete genome1e-85325BLASTN svgBLASTP svg
NC_009092:2902171*2902171293049428324Shewanella loihica PV-4, complete genome4e-79303BLASTN svgBLASTP svg
NC_014012:33566293356629337459917971Shewanella violacea DSS12, complete genome2e-44188BLASTN svgBLASTP svg
NC_009092:19899771989977201854528569Shewanella loihica PV-4, complete genome1e-42182BLASTN svgBLASTP svg
NC_009052:4437649*4437649446134423696Shewanella baltica OS155, complete genome9e-34153BLASTN svgBLASTP svg
NC_009997:20698942069894209159921706Shewanella baltica OS195, complete genome1e-26129BLASTN svgBLASTP svg
NC_008750:45023345023347009919867Shewanella sp. W3-18-1, complete genome2e-25125BLASTN svgBLASTP svg
NC_007954:2440000*2440000246325523256Shewanella denitrificans OS217, complete genome3e-24121BLASTN svgBLASTP svg
NC_010334:2131939*2131939215848226544Shewanella halifaxensis HAW-EB4, complete genome3e-18101BLASTN svgBLASTP svg
NC_009092:26441642644164266929125128Shewanella loihica PV-4, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_008345:41078474107847413795830112Shewanella frigidimarina NCIMB 400, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009052:18999541899954192338923436Shewanella baltica OS155, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004347:4211241*4211241423643925199Shewanella oneidensis MR-1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009778:11417161141716117336531650Enterobacter sakazakii ATCC BAA-894, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007005:3684099*3684099370898924891Pseudomonas syringae pv. syringae B728a, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009092:36824133682413370194319531Shewanella loihica PV-4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009092:32395003239500326129021791Shewanella loihica PV-4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008322:29839512983951300671222762Shewanella sp. MR-7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008321:29220002922000294409922100Shewanella sp. MR-4, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007951:76950076950079672027221Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013282:28277572827757286060332847Cronobacter turicensis, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_020260:11841741184174121484630673Cronobacter sakazakii Sp291, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010506:51559515155951517924523295Shewanella woodyi ATCC 51908, complete genome1e-0560BLASTN svgBLASTP svg
NC_009092:26177826177828459922822Shewanella loihica PV-4, complete genome1e-0560BLASTN svgBLASTP svg
NC_009092:25295182529518255250622989Shewanella loihica PV-4, complete genome1e-0560BLASTN svgBLASTP svg