Pre_GI: BLASTN Hits

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Query: NC_009512:5632591 Pseudomonas putida F1, complete genome

Start: 5632591, End: 5686531, Length: 53941

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008027:55333115533311555523921929Pseudomonas entomophila L48, complete genome02712BLASTN svgBLASTP svg
NC_002947:48050604805060483118826129Pseudomonas putida KT2440, complete genome4e-35159BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome9e-33151BLASTN svgBLASTP svg
NC_021150:18238741823874184285118978Azotobacter vinelandii CA6, complete genome4e-32149BLASTN svgBLASTP svg
NC_012560:18238611823861184283818978Azotobacter vinelandii DJ, complete genome4e-32149BLASTN svgBLASTP svg
NC_008345:41078474107847413795830112Shewanella frigidimarina NCIMB 400, complete genome1e-31147BLASTN svgBLASTP svg
NC_008573:19531719531724745052134Shewanella sp. ANA-3 plasmid 1, complete sequence1e-31147BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome3e-29139BLASTN svgBLASTP svg
NC_009512:43754524375452440539429943Pseudomonas putida F1, complete genome3e-29139BLASTN svgBLASTP svg
NC_007492:29940362994036302311329078Pseudomonas fluorescens PfO-1, complete genome5e-28135BLASTN svgBLASTP svg
NC_002927:2636694*2636694265936422671Bordetella bronchiseptica RB50, complete genome8e-27131BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome3e-26129BLASTN svgBLASTP svg
NC_011901:2914000*2914000293681522816Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-24123BLASTN svgBLASTP svg
NC_020209:4312892*4312892435777044879Pseudomonas poae RE*1-1-14, complete genome2e-24123BLASTN svgBLASTP svg
NC_005085:1269787*1269787132843458648Chromobacterium violaceum ATCC 12472, complete genome3e-23119BLASTN svgBLASTP svg
NC_011662:23749552374955239350718553Thauera sp. MZ1T, complete genome2e-21113BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_013889:413909*41390943968925781Thioalkalivibrio sp. K90mix chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_008789:942309*94230996834126033Halorhodospira halophila SL1, complete genome7e-1591.7BLASTN svgBLASTP svg
NC_002947:34923793492379351709924721Pseudomonas putida KT2440, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_007275:112112521125Pseudomonas syringae pv. phaseolicola 1448A small plasmid, complete4e-1075.8BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-0973.8BLASTN svgBLASTP svg
NC_011145:4628000*4628000465886330864Anaeromyxobacter sp. K, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_011751:3048490*3048490309200343514Escherichia coli UMN026 chromosome, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_016002:17659591765959178809922141Pseudogulbenkiania sp. NH8B, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008782:13080071308007132716219156Acidovorax sp. JS42, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_009512:10253651025365104401118647Pseudomonas putida F1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_007005:16050001605000162491619917Pseudomonas syringae pv. syringae B728a, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_009512:4287605*4287605432250934905Pseudomonas putida F1, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_009138:15183151518315154209923785Herminiimonas arsenicoxydans, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_009348:2034500*2034500205759923100Aeromonas salmonicida subsp. salmonicida A449, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_009512:3618055*3618055363859920545Pseudomonas putida F1, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013855:89265789265791607423418Azospirillum sp. B510 plasmid pAB510a, complete sequence2e-0663.9BLASTN svgBLASTP svg
NC_015565:1163148*1163148118631723170Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete2e-0663.9BLASTN svgBLASTP svg
NC_015733:13980831398083142324125159Pseudomonas putida S16 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015733:1680500*1680500170310522606Pseudomonas putida S16 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_018524:50667205066720509078524066Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_019974:1909244*1909244194059931356Natronococcus occultus SP4, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007005:2149275*2149275217042621152Pseudomonas syringae pv. syringae B728a, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_007005:5367454*5367454539426326810Pseudomonas syringae pv. syringae B728a, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_007951:92544292544294860323162Burkholderia xenovorans LB400 chromosome 1, complete sequence6e-0661.9BLASTN svgBLASTP svg
NC_010694:30554033055403307880623404Erwinia tasmaniensis, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_013172:25565172556517257961323097Brachybacterium faecium DSM 4810, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-0661.9BLASTN svgBLASTP svg