Pre_GI Gene

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Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:5367454 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
536613853674571320extracellular solute-binding protein family 1QuickGO ontologyBLASTP
53674545368347894Binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
53683445369237894Binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
536923453703401107ABC transporterQuickGO ontologyBLASTP
53703475371108762Glycerophosphodiester phosphodiesteraseQuickGO ontologyBLASTP
53711055371848744Inositol monophosphataseQuickGO ontologyBLASTP
537184853729601113Endo-14-beta-xylanaseQuickGO ontologyBLASTP
53734705374126657hypothetical proteinBLASTP
53741195374988870hypothetical proteinBLASTP
537496053760481089hypothetical proteinBLASTP
53760045376594591putative phage-related proteinQuickGO ontologyBLASTP
53766645377077414hypothetical proteinBLASTP
537778053788651086hypothetical proteinBLASTP
537899953802011203hypothetical proteinBLASTP
53806135381140528hypothetical proteinBLASTP
538104453822011158SEC-C motifQuickGO ontologyBLASTP
53825405383091552single-strand DNA-binding proteinQuickGO ontologyBLASTP
538310153844951395General substrate transporterMajor facilitator superfamilyQuickGO ontologyBLASTP
538457453874592886excinuclease ABC subunit AQuickGO ontologyBLASTP
53875545388018465BacterioferritinQuickGO ontologyBLASTP
538817353896181446CatalaseQuickGO ontologyBLASTP
5389786539017238750S ribosomal protein L17QuickGO ontologyBLASTP
539021453912151002DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
5391238539185862130S ribosomal protein S4QuickGO ontologyBLASTP
5391877539226639030S ribosomal protein S11QuickGO ontologyBLASTP
5392297539265335730S ribosomal protein S13QuickGO ontologyBLASTP
539292953942631335preprotein translocase SecYQuickGO ontologyBLASTP