Pre_GI: BLASTN Hits

Some Help

Query: NC_008146:861319 Mycobacterium sp. MCS, complete genome

Start: 861319, End: 944146, Length: 82828

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008705:86862386862395099082368Mycobacterium sp. KMS, complete genome083310BLASTN svgBLASTP svg
NC_008146:1016446*1016446104459328148Mycobacterium sp. MCS, complete genome02950BLASTN svgBLASTP svg
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome02811BLASTN svgBLASTP svg
NC_008705:1022252*1022252104828626035Mycobacterium sp. KMS, complete genome02811BLASTN svgBLASTP svg
NC_008146:15776041577604160675629153Mycobacterium sp. MCS, complete genome02811BLASTN svgBLASTP svg
NC_008146:15358271535827156295027124Mycobacterium sp. MCS, complete genome02809BLASTN svgBLASTP svg
NC_008705:15370801537080155764220563Mycobacterium sp. KMS, complete genome02809BLASTN svgBLASTP svg
NC_008705:27434*274345721729784Mycobacterium sp. KMS, complete genome02809BLASTN svgBLASTP svg
NC_008705:5144433*5144433517009925667Mycobacterium sp. KMS, complete genome02809BLASTN svgBLASTP svg
NC_014814:38920003892000392242630427Mycobacterium sp. Spyr1 chromosome, complete genome02708BLASTN svgBLASTP svg
NC_008705:17902221790222183895348732Mycobacterium sp. KMS, complete genome02272BLASTN svgBLASTP svg
NC_008595:22152442215244224973534492Mycobacterium avium 104, complete genome02123BLASTN svgBLASTP svg
NC_008595:22528302252830227372020891Mycobacterium avium 104, complete genome02119BLASTN svgBLASTP svg
NC_009077:4671417*4671417469950728091Mycobacterium sp. JLS, complete genome01659BLASTN svgBLASTP svg
NC_009077:16873041687304172055433251Mycobacterium sp. JLS, complete genome01655BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome01655BLASTN svgBLASTP svg
NC_009077:17256831725683177988554203Mycobacterium sp. JLS, complete genome01653BLASTN svgBLASTP svg
NC_008705:27631312763131279239929269Mycobacterium sp. KMS, complete genome01653BLASTN svgBLASTP svg
NC_008705:18399831839983186445724475Mycobacterium sp. KMS, complete genome01653BLASTN svgBLASTP svg
NC_008146:27446122744612277451129900Mycobacterium sp. MCS, complete genome01653BLASTN svgBLASTP svg
NC_008726:11759991175999119522119223Mycobacterium vanbaalenii PYR-1, complete genome01602BLASTN svgBLASTP svg
NC_014814:85912485912490088141758Mycobacterium sp. Spyr1 chromosome, complete genome01287BLASTN svgBLASTP svg
NC_015576:14427131442713147609933387Mycobacterium sp. JDM601 chromosome, complete genome0906BLASTN svgBLASTP svg
NC_015576:808926*80892683565426729Mycobacterium sp. JDM601 chromosome, complete genome0902BLASTN svgBLASTP svg
NC_015576:39766793976679403475658078Mycobacterium sp. JDM601 chromosome, complete genome0892BLASTN svgBLASTP svg
NC_008726:61000061000062882018821Mycobacterium vanbaalenii PYR-1, complete genome0799BLASTN svgBLASTP svg
NC_012803:2195808*2195808224976153954Micrococcus luteus NCTC 2665, complete genome0662BLASTN svgBLASTP svg
NC_012803:13022611302261132380421544Micrococcus luteus NCTC 2665, complete genome0660BLASTN svgBLASTP svg
NC_012803:17531381753138177628023143Micrococcus luteus NCTC 2665, complete genome0660BLASTN svgBLASTP svg
NC_012803:3691*36914264438954Micrococcus luteus NCTC 2665, complete genome0660BLASTN svgBLASTP svg
NC_012803:361127*36112738262921503Micrococcus luteus NCTC 2665, complete genome1e-174622BLASTN svgBLASTP svg
NC_008595:26872452687245272814940905Mycobacterium avium 104, complete genome2e-173618BLASTN svgBLASTP svg
NC_008595:25466962546696258480338108Mycobacterium avium 104, complete genome8e-173617BLASTN svgBLASTP svg
NC_008595:19114911911491193399222502Mycobacterium avium 104, complete genome8e-173617BLASTN svgBLASTP svg
NC_008595:14133541413354144379430441Mycobacterium avium 104, complete genome8e-173617BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome8e-173617BLASTN svgBLASTP svg
NC_009077:87416487416490865534492Mycobacterium sp. JLS, complete genome2e-151545BLASTN svgBLASTP svg
NC_012803:1094679*1094679111581321135Micrococcus luteus NCTC 2665, complete genome2e-139505BLASTN svgBLASTP svg
NC_013169:513327*51332754059927273Kytococcus sedentarius DSM 20547, complete genome2e-115426BLASTN svgBLASTP svg
NC_013169:1845735*1845735186893023196Kytococcus sedentarius DSM 20547, complete genome2e-115426BLASTN svgBLASTP svg
NC_008596:13020001302000135784455845Mycobacterium smegmatis str. MC2 155, complete genome9e-111410BLASTN svgBLASTP svg
NC_008596:2873675*2873675289516021486Mycobacterium smegmatis str. MC2 155, complete genome7e-93351BLASTN svgBLASTP svg
NC_014218:16890021689002171187222871Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome3e-92349BLASTN svgBLASTP svg
NC_008726:11425001142500117062228123Mycobacterium vanbaalenii PYR-1, complete genome8e-62248BLASTN svgBLASTP svg
NC_014814:13240413240415486122458Mycobacterium sp. Spyr1 chromosome, complete genome6e-35159BLASTN svgBLASTP svg
NC_013235:40455894045589406814822560Nakamurella multipartita DSM 44233, complete genome2e-34157BLASTN svgBLASTP svg
NC_014659:17311211731121175858327463Rhodococcus equi 103S, complete genome3e-33153BLASTN svgBLASTP svg
NC_014815:658893*65889368838329491Micromonospora sp. L5 chromosome, complete genome1e-32151BLASTN svgBLASTP svg
NC_014391:4672105*4672105470459932495Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-32151BLASTN svgBLASTP svg
NC_014391:1812500*1812500186094748448Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-32151BLASTN svgBLASTP svg
NC_013235:2257899*2257899229859940701Nakamurella multipartita DSM 44233, complete genome5e-32149BLASTN svgBLASTP svg
NC_013729:863743*86374390229738555Kribbella flavida DSM 17836, complete genome2e-31147BLASTN svgBLASTP svg
NC_013169:612456*61245664773335278Kytococcus sedentarius DSM 20547, complete genome3e-30143BLASTN svgBLASTP svg
NC_013131:997692999769291000446227534Catenulispora acidiphila DSM 44928, complete genome3e-30143BLASTN svgBLASTP svg
NC_018581:2768743*2768743283262663884Gordonia sp. KTR9 chromosome, complete genome2e-28137BLASTN svgBLASTP svg
NC_000962:34740003474000349418120182Mycobacterium tuberculosis H37Rv, complete genome8e-28135BLASTN svgBLASTP svg
NC_002755:34655823465582349023924658Mycobacterium tuberculosis CDC1551, complete genome8e-28135BLASTN svgBLASTP svg
NC_002945:34293153429315345013820824Mycobacterium bovis AF2122/97, complete genome8e-28135BLASTN svgBLASTP svg
NC_008769:34272543427254344807620823Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome8e-28135BLASTN svgBLASTP svg
NC_009525:34849243484924350559920676Mycobacterium tuberculosis H37Ra, complete genome8e-28135BLASTN svgBLASTP svg
NC_009565:34857723485772350477419003Mycobacterium tuberculosis F11, complete genome8e-28135BLASTN svgBLASTP svg
NC_012207:34211443421144344072619583Mycobacterium bovis BCG str. Tokyo 172, complete genome8e-28135BLASTN svgBLASTP svg
NC_013235:13544431354443137485420412Nakamurella multipartita DSM 44233, complete genome3e-27133BLASTN svgBLASTP svg
NC_014830:33874793387479343444046962Intrasporangium calvum DSM 43043 chromosome, complete genome8e-25125BLASTN svgBLASTP svg
NC_010612:46795944679594471951939926Mycobacterium marinum M, complete genome8e-25125BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-23121BLASTN svgBLASTP svg
NC_013530:24923122492312252459632285Xylanimonas cellulosilytica DSM 15894, complete genome2e-19107BLASTN svgBLASTP svg
NC_013093:1157476*1157476117633118856Actinosynnema mirum DSM 43827, complete genome1e-17101BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome1e-17101BLASTN svgBLASTP svg
NC_015957:8677395*8677395870777930385Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-1799.6BLASTN svgBLASTP svg
NC_013510:2937530*2937530296330725778Thermomonospora curvata DSM 43183, complete genome1e-1491.7BLASTN svgBLASTP svg
NC_009921:1645380*1645380166750622127Frankia sp. EAN1pec, complete genome2e-1387.7BLASTN svgBLASTP svg
NC_009921:3384116*3384116340895324838Frankia sp. EAN1pec, complete genome2e-1387.7BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome2e-1387.7BLASTN svgBLASTP svg
NC_019673:13847951384795141142926635Saccharothrix espanaensis DSM 44229 complete genome2e-1387.7BLASTN svgBLASTP svg
NC_014159:37920379205903321114Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete7e-1385.7BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome7e-1385.7BLASTN svgBLASTP svg
NC_012803:15191381519138153782318686Micrococcus luteus NCTC 2665, complete genome7e-1385.7BLASTN svgBLASTP svg
NC_008726:49476949476951509920331Mycobacterium vanbaalenii PYR-1, complete genome3e-1283.8BLASTN svgBLASTP svg
NC_014210:32485263248526327306124536Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-1181.8BLASTN svgBLASTP svg
NC_015434:666692*66669270459937908Verrucosispora maris AB-18-032 chromosome, complete genome4e-1179.8BLASTN svgBLASTP svg
NC_015957:27817402781740280943627697Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1077.8BLASTN svgBLASTP svg
NC_015957:3067919*3067919309418126263Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_015125:1668780*1668780169404425265Microbacterium testaceum StLB037, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_014318:9120651*9120651914722326573Amycolatopsis mediterranei U32 chromosome, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_013521:345308*34530838171936412Sanguibacter keddieii DSM 10542, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_008278:256427*25642728240725981Frankia alni ACN14a, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_008726:17761921776192180185525664Mycobacterium vanbaalenii PYR-1, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_019673:1275627*1275627131011934493Saccharothrix espanaensis DSM 44229 complete genome3e-0973.8BLASTN svgBLASTP svg
NC_009076:35645003564500360973145232Burkholderia pseudomallei 1106a chromosome I, complete sequence4e-0869.9BLASTN svgBLASTP svg
NC_009943:27215827215829931927162Candidatus Desulfococcus oleovorans Hxd3, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_010172:480000*48000053036650367Methylobacterium extorquens PA1, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_013235:508585*50858553729628712Nakamurella multipartita DSM 44233, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_015312:1191633*1191633121600524373Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_015859:31265003126500314878722288Corynebacterium variabile DSM 44702 chromosome, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_002944:23738732373873239934625474Mycobacterium avium subsp. paratuberculosis K-10, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_002944:865425*86542589916033736Mycobacterium avium subsp. paratuberculosis K-10, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_002944:990009900011707318074Mycobacterium avium subsp. paratuberculosis K-10, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_004369:531579*53157956209930521Corynebacterium efficiens YS-314, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_014318:61086336108633613113322501Amycolatopsis mediterranei U32 chromosome, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_004129:2034500*2034500206459930100Pseudomonas fluorescens Pf-5, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007005:2149275*2149275217042621152Pseudomonas syringae pv. syringae B728a, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007164:18391541839154187426735114Corynebacterium jeikeium K411, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007164:2068678*2068678209743828761Corynebacterium jeikeium K411, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007164:2261644*2261644228587624233Corynebacterium jeikeium K411, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007164:54765454765457047722824Corynebacterium jeikeium K411, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007164:622000*62200065646734468Corynebacterium jeikeium K411, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007164:62816628168338620571Corynebacterium jeikeium K411, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014923:26720002672000269164419645Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete2e-0663.9BLASTN svgBLASTP svg
NC_015675:28390002839000285961920620Mesorhizobium opportunistum WSM2075 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015859:3177199*3177199321545938261Corynebacterium variabile DSM 44702 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_019973:27440002744000276369719698Mesorhizobium australicum WSM2073, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_008542:2631138*2631138265802226885Burkholderia cenocepacia HI2424 chromosome 1, complete sequence1e-0561.9BLASTN svgBLASTP svg
NC_008060:1945597*1945597197248126885Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence1e-0561.9BLASTN svgBLASTP svg