Pre_GI: BLASTN Hits

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Query: NC_008011:213386 Lawsonia intracellularis PHE/MN1-00, complete genome

Start: 213386, End: 249495, Length: 36110

Host Lineage: Lawsonia intracellularis; Lawsonia; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Lawsonia intracellularis PHE/MN1-00 was isolated from intestinal mucosal lesions in pigs that had proliferative enteropathy (PE). When introduced into health pigs, this organism produced the clinical and histological signs of PE. Causative agent for proliferative enteropathy in swine. This organism causes proliferative enteropathy (ileitis) in swine and other domesticated animals resulting in severe losses each year. This obligate intracellular pathogen infects the mucosa of the lower intestinal tract by initially infecting crypt cells, which are precursors that normally grow and divide in order to replace the epithelial cells. Once infection occurs, the crypt cells are stimulated to grow and divide abnormally, resulting in the proliferative phenotype. In severe cases of the disease the entire bowel can become affected and persist for up to 40 days, greatly affecting the host animal.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012815:1092795*1092795111559922805Bifidobacterium animalis subsp. lactis DSM 10140, complete genome02442BLASTN svgBLASTP svg
NC_012814:1092860*1092860111560222743Bifidobacterium animalis subsp. lactis Bl-04, complete genome02442BLASTN svgBLASTP svg
NC_015385:2050648*2050648208291832271Treponema succinifaciens DSM 2489 chromosome, complete genome02327BLASTN svgBLASTP svg
NC_015214:18531061853106188009926994Lactobacillus acidophilus 30SC chromosome, complete genome02327BLASTN svgBLASTP svg
NC_002528:404545*40454542822723683Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete4e-28135BLASTN svgBLASTP svg
NC_004344:25747125747127832220852Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,5e-24121BLASTN svgBLASTP svg
NC_015930:18969*189693942820460Lactococcus garvieae ATCC 49156, complete genome3e-22115BLASTN svgBLASTP svg
NC_014328:4471995*4471995450215530161Clostridium ljungdahlii ATCC 49587 chromosome, complete genome8e-20107BLASTN svgBLASTP svg
NC_013316:4018451*4018451404145623006Clostridium difficile R20291, complete genome1e-18103BLASTN svgBLASTP svg
NC_009089:4140764*4140764416313522372Clostridium difficile 630, complete genome1e-18103BLASTN svgBLASTP svg
NC_004545:392685*39268541484522161Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome5e-18101BLASTN svgBLASTP svg
NC_020299:149118*14911816889819781Candidatus Kinetoplastibacterium oncopeltii TCC290E, complete2e-1799.6BLASTN svgBLASTP svg
NC_004557:162670*16267018073018061Clostridium tetani E88, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_004193:79588*7958811154731960Oceanobacillus iheyensis HTE831, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_012563:4004709*4004709403727332565Clostridium botulinum A2 str. Kyoto, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_010516:3807780*3807780384035532576Clostridium botulinum B1 str. Okra, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_005061:96536*9653614201245477Candidatus Blochmannia floridanus, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_003030:3324834*3324834334964224809Clostridium acetobutylicum ATCC 824, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_007929:1397989*1397989142649328505Lactobacillus salivarius subsp. salivarius UCC118, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015687:3326461*3326461335126824808Clostridium acetobutylicum DSM 1731 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_020291:117983*11798315068032698Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome7e-1487.7BLASTN svgBLASTP svg
NC_014393:4541000*4541000456644025441Clostridium cellulovorans 743B chromosome, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_008593:153014*15301417175318740Clostridium novyi NT, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_020075:114790*11479013461719828Candidatus Blochmannia chromaiodes str. 640, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007292:11339611339613533421939Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_005043:1143557*1143557116633522779Chlamydophila pneumoniae TW-183, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_002179:904518*90451892355919042Chlamydophila pneumoniae AR39, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_000922:1147855*1147855116890121047Chlamydophila pneumoniae CWL029, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_008710:819389*81938984556126173Borrelia turicatae 91E135, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_011999:2023248*2023248204877425527Macrococcus caseolyticus JCSC5402, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_014758:1489761*1489761151270922949Calditerrivibrio nitroreducens DSM 19672 chromosome, complete7e-1177.8BLASTN svgBLASTP svg
NC_010001:40406640406642359919534Clostridium phytofermentans ISDg, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_018664:2459994*2459994248609926106Clostridium acidurici 9a chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010723:173280*17328022135248073Clostridium botulinum E3 str. Alaska E43, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015958:2361551*2361551238227520725Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015581:771482*77148280463933158Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014166:681290*68129070228720998Arcobacter nitrofigilis DSM 7299 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_007576:1564739*1564739158846023722Lactobacillus sakei subsp. sakei 23K, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_004668:241352*24135226701725666Enterococcus faecalis V583, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_004557:26070732607073263038423312Clostridium tetani E88, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009850:445000*44500046374218743Arcobacter butzleri RM4018, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014909:86000*8600012150135502Candidatus Blochmannia vafer str. BVAF chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008525:1493317*1493317151610022784Pediococcus pentosaceus ATCC 25745, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012880:3915500*3915500393874123242Dickeya dadantii Ech703, complete genome4e-0661.9BLASTN svgBLASTP svg