Pre_GI: BLASTN Hits

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Query: NC_007925:3911323 Rhodopseudomonas palustris BisB18, complete genome

Start: 3911323, End: 3933151, Length: 21829

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010338:41486674148667417175123085Caulobacter sp. K31, complete genome8e-133482BLASTN svgBLASTP svg
NC_009720:81315781315783515121995Xanthobacter autotrophicus Py2, complete genome4e-116426BLASTN svgBLASTP svg
NC_009720:33176423317642334276225121Xanthobacter autotrophicus Py2, complete genome5e-103383BLASTN svgBLASTP svg
NC_019902:23720972372097239285820762Thioalkalivibrio nitratireducens DSM 14787, complete genome5e-100373BLASTN svgBLASTP svg
NC_009720:75061275061278422333612Xanthobacter autotrophicus Py2, complete genome3e-95357BLASTN svgBLASTP svg
NC_009668:52917552917554876219588Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence3e-92347BLASTN svgBLASTP svg
NC_011901:27399842739984276222422241Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-89337BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-84321BLASTN svgBLASTP svg
NC_009937:43921084392108441736925262Azorhizobium caulinodans ORS 571, complete genome7e-81309BLASTN svgBLASTP svg
NC_013889:1514799*1514799153542720629Thioalkalivibrio sp. K90mix chromosome, complete genome1e-79305BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome1e-79305BLASTN svgBLASTP svg
NC_019940:13093591309359133197622618Thioflavicoccus mobilis 8321 chromosome, complete genome2e-77297BLASTN svgBLASTP svg
NC_008686:14393281439328146928729960Paracoccus denitrificans PD1222 chromosome 1, complete sequence4e-76293BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome2e-74287BLASTN svgBLASTP svg
NC_010725:33150073315007334271327707Methylobacterium populi BJ001, complete genome9e-74285BLASTN svgBLASTP svg
NC_007347:32046373204637323548530849Ralstonia eutropha JMP134 chromosome 1, complete sequence1e-72281BLASTN svgBLASTP svg
NC_009720:67085367085369197421122Xanthobacter autotrophicus Py2, complete genome9e-71276BLASTN svgBLASTP svg
NC_008254:53459053459055841423825Mesorhizobium sp. BNC1, complete genome6e-69270BLASTN svgBLASTP svg
NC_020453:17854731785473180825422782Agromonas oligotrophica S58 DNA, complete genome5e-66260BLASTN svgBLASTP svg
NC_005085:24572952457295248428326989Chromobacterium violaceum ATCC 12472, complete genome5e-60240BLASTN svgBLASTP svg
NC_016002:1975000*1975000202494749948Pseudogulbenkiania sp. NH8B, complete genome1e-57232BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome2e-53218BLASTN svgBLASTP svg
NC_009439:34850003485000350721722218Pseudomonas mendocina ymp, complete genome2e-53218BLASTN svgBLASTP svg
NC_002516:1236644*1236644126316626523Pseudomonas aeruginosa PAO1, complete genome1e-51212BLASTN svgBLASTP svg
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome7e-50206BLASTN svgBLASTP svg
NC_011770:45915004591500460979518296Pseudomonas aeruginosa LESB58, complete genome3e-49204BLASTN svgBLASTP svg
NC_008463:4389721*4389721441663526915Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-49204BLASTN svgBLASTP svg
NC_015410:3791500*3791500381292521426Pseudomonas mendocina NK-01 chromosome, complete genome1e-48202BLASTN svgBLASTP svg
NC_011666:16019831601983162289320911Methylocella silvestris BL2, complete genome4e-48200BLASTN svgBLASTP svg
NC_010645:3239420*3239420326166922250Bordetella avium 197N, complete genome4e-42180BLASTN svgBLASTP svg
NC_010125:10114301011430103468823259Gluconacetobacter diazotrophicus PAl 5, complete genome1e-39172BLASTN svgBLASTP svg
NC_007404:20480002048000206896120962Thiobacillus denitrificans ATCC 25259, complete genome6e-38167BLASTN svgBLASTP svg
NC_005773:4282840*4282840431412131282Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-32147BLASTN svgBLASTP svg
NC_009720:32103873210387322809917713Xanthobacter autotrophicus Py2, complete genome2e-31145BLASTN svgBLASTP svg
NC_011206:22391092239109225942920321Acidithiobacillus ferrooxidans ATCC 53993, complete genome1e-26129BLASTN svgBLASTP svg
NC_010125:28136532813653283723423582Gluconacetobacter diazotrophicus PAl 5, complete genome1e-20109BLASTN svgBLASTP svg
NC_013959:26663212666321269260826288Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_015942:25444072544407256835223946Acidithiobacillus ferrivorans SS3 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007643:95536295536297459919238Rhodospirillum rubrum ATCC 11170, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015422:1643000*1643000166547622477Alicycliphilus denitrificans K601 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_008254:61143761143762981918383Mesorhizobium sp. BNC1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_003063:11283701128370115539427025Agrobacterium tumefaciens str. C58 chromosome linear, complete3e-1281.8BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020064:3825916*3825916385292327008Serratia marcescens FGI94, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008577:14896431489643151651426872Shewanella sp. ANA-3 chromosome 1, complete sequence4e-1177.8BLASTN svgBLASTP svg
NC_008343:88184*8818411285024667Granulibacter bethesdensis CGDNIH1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_018644:910000*91000093169821699Alpha proteobacterium HIMB59 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_018691:30820003082000310649724498Alcanivorax dieselolei B5 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009937:958576*95857698323924664Azorhizobium caulinodans ORS 571, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015259:1803266*1803266182644223177Polymorphum gilvum SL003B-26A1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015410:3209954*3209954323120121248Pseudomonas mendocina NK-01 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_004463:23441282344128236509920972Bradyrhizobium japonicum USDA 110, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008044:1401814*1401814142133819525Silicibacter sp. TM1040, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008757:770237702310503328011Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete4e-0867.9BLASTN svgBLASTP svg
NC_010376:606000*60600062469418695Finegoldia magna ATCC 29328, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014614:554949*55494957879923851Clostridium sticklandii, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002927:5327094*5327094535399926906Bordetella bronchiseptica RB50, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004547:843475*84347586442120947Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008825:25649652564965258966024696Methylibium petroleiphilum PM1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009922:1917271*1917271193756720297Alkaliphilus oremlandii OhILAs, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010645:3720501*3720501374549924999Bordetella avium 197N, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_004757:427483*42748347957952097Nitrosomonas europaea ATCC 19718, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006348:2738425*2738425276209923675Burkholderia mallei ATCC 23344 chromosome 1, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_007794:262402*26240229308630685Novosphingobium aromaticivorans DSM 12444, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008344:1899317*1899317192509925783Nitrosomonas eutropha C91, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009720:583060*58306060772824669Xanthobacter autotrophicus Py2, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010520:3526883*3526883355123524353Clostridium botulinum A3 str. Loch Maree, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013171:1420135*1420135144484824714Anaerococcus prevotii DSM 20548, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013171:228356*22835625488926534Anaerococcus prevotii DSM 20548, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015458:3077804*3077804310090323100Pusillimonas sp. T7-7 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_016026:21705002170500219248521986Micavibrio aeruginosavorus ARL-13 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_002695:3702344*3702344374703744694Escherichia coli O157:H7 str. Sakai, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002655:3769643*3769643381434344701Escherichia coli O157:H7 EDL933, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_000913:2975659*2975659300672831070Escherichia coli K12, complete genome3e-0661.9BLASTN svgBLASTP svg
CU928160:3030324*3030324306823137908Escherichia coli IAI1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
CU928145:3196173*3196173323284736675Escherichia coli 55989 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002516:903241*90324194330840068Escherichia coli KO11, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002185:3167738*3167738320702439287Escherichia coli W, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008095:63234566323456634843724982Myxococcus xanthus DK 1622, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009801:31757143175714321109935386Escherichia coli E24377A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010468:906957*90695794803541079Escherichia coli ATCC 8739, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010473:3069529*3069529310059831070Escherichia coli str. K-12 substr. DH10B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011748:3196173*3196173323284736675Escherichia coli 55989, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011750:3407500*3407500343726129762Escherichia coli IAI39 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011751:3285646*3285646333126645621Escherichia coli UMN026 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012779:3176820*3176820323178054961Edwardsiella ictaluri 93-146, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015711:81697528169752821033740586Myxococcus fulvus HW-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018664:985689*985689100461118923Clostridium acidurici 9a chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
AC_000091:29762932976293300863132339Escherichia coli W3110 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg