Pre_GI: BLASTP Hits

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Query: NC_021182:1983456:2002176 Clostridium pasteurianum BC1, complete genome

Start: 2002176, End: 2003183, Length: 1008

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002953:2773000:2785347278534727863631017Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative nickel transport protein1e-93343
NC_003923:2794686:2806007280600728070231017Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein1e-93343
NC_017273:352150:3828753828753839091035Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completehigh-affinity nickel-transporter8e-92337
NC_013209:2536500:2544897254489725459311035Acetobacter pasteurianus IFO 3283-01, complete genometransporter with high-affinity to nickel2e-67256
NC_017100:2538461:2546104254610425471381035Acetobacter pasteurianus IFO 3283-03, complete genometransporter with high-affinity to nickel2e-67256
NC_017108:2535798:2543441254344125444751035Acetobacter pasteurianus IFO 3283-12, complete genometransporter with high-affinity to nickel2e-67256
NC_017111:2535000:2543459254345925444931035Acetobacter pasteurianus IFO 3283-32, complete genometransporter with high-affinity to nickel2e-67256
NC_017121:2535803:2543446254344625444801035Acetobacter pasteurianus IFO 3283-07, complete genometransporter with high-affinity to nickel2e-67256
NC_017125:2538441:2546084254608425471181035Acetobacter pasteurianus IFO 3283-22, complete genometransporter with high-affinity to nickel2e-67256
NC_017146:2538483:2546126254612625471601035Acetobacter pasteurianus IFO 3283-26, complete genometransporter with high-affinity to nickel2e-67256
NC_014029:3047506:3054008305400830550661059Yersinia pestis Z176003 chromosome, complete genomeputative nickel transport protein3e-65249
NC_009381:1783886:1796603179660317976611059Yersinia pestis Pestoides F chromosome, complete genomenickel transport protein3e-65249
NC_010465:1273000:1277611127761112786691059Yersinia pseudotuberculosis YPIII, complete genomehigh-affinity nickel-transporter3e-65249
NC_008150:2681327:2687829268782926888871059Yersinia pestis Antiqua, complete genomeputative nickel transport protein3e-65249
NC_010159:3779129:3783617378361737846751059Yersinia pestis Angola, complete genomehigh-affinity nickel transport protein3e-65249
NC_008149:1317109:1323611132361113246691059Yersinia pestis Nepal516, complete genomenickel transport protein3e-65249
NC_003143:2992295:2998797299879729998551059Yersinia pestis CO92, complete genomeputative nickel transport protein3e-65249
NC_017154:2999841:3011367301136730124251059Yersinia pestis D106004 chromosome, complete genomeputative nickel transport protein3e-65249
NC_017160:2976683:2978982297898229800401059Yersinia pestis D182038 chromosome, complete genomeputative nickel transport protein3e-65249
NC_017168:2751027:2762553276255327636111059Yersinia pestis A1122 chromosome, complete genomeputative nickel transport protein3e-65249
NC_017265:3063016:3074542307454230756001059Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative nickel transport protein3e-65249
NC_005810:2739878:2746356274635627474381083Yersinia pestis biovar Microtus str. 91001, complete genomeputative nickel transport protein3e-65249
NC_004088:1387276:1393688139368813947701083Yersinia pestis KIM, complete genomenickel transport protein3e-65249
NC_006155:3456488:3468011346801134690691059Yersinia pseudotuberculosis IP 32953, complete genomeputative nickel transport (NiCoT family) protein2e-65249
NC_010634:3368000:3381668338166833827261059Yersinia pseudotuberculosis PB1/+, complete genomehigh-affinity nickel-transporter2e-65249
NC_009708:1284555:1289228128922812902861059Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehigh-affinity nickel transport protein2e-65249
NC_016831:2779864:2793503279350327945161014Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative cation transporter6e-63241
NC_006905:2857699:2885896288589628869091014Salmonella enterica subsp. enterica serovar Choleraesuis strputative nickel transporter2e-62239
NC_003197:2894344:2931213293121329322261014Salmonella typhimurium LT2, complete genomeputative nickel transporter4e-62238
NC_016810:2943912:2953789295378929548021014Salmonella enterica subsp. enterica serovar Typhimurium strputative cation transporter4e-62238
NC_016856:2896630:2951448295144829524611014Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative nickel transporter4e-62238
NC_016857:2943912:2953789295378929548021014Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative nickel transporter4e-62238
NC_016860:2917910:2954779295477929557921014Salmonella enterica subsp. enterica serovar Typhimurium strputative nickel transporter4e-62238
NC_016863:2844883:2899701289970129007141014Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative nickel transporter4e-62238
NC_017046:2943929:2952529295252929535421014Salmonella enterica subsp. enterica serovar Typhimurium str. 798cation transporter4e-62238
NC_011094:2791719:2838340283834028393531014Salmonella enterica subsp. enterica serovar Schwarzengrund strhigh-affinity nickel transport protein4e-62238
NC_012125:2826624:2866428286642828674411014Salmonella enterica subsp. enterica serovar Paratyphi C strainnickel transporter4e-62238
NC_011294:2802502:2816140281614028171531014Salmonella enterica subsp. enterica serovar Enteritidis strcation transporter4e-62238
NC_011205:2962270:2975907297590729769201014Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853high-affinity nickel transport protein4e-62238
NC_011080:2897977:2907853290785329088661014Salmonella enterica subsp. enterica serovar Newport str. SL254,high-affinity nickel transport protein4e-62238
NC_011083:2847318:2905724290572429067371014Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,high-affinity nickel transport protein4e-62238
NC_003198:2769449:2784279278427927852891011Salmonella enterica subsp. enterica serovar Typhi str. CT18,9e-62237
NC_016832:2743801:275743227574322758337906Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Nickel transport protein1e-61236
NC_010102:2881714:2895355289535528963681014Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-61236
NC_011149:2829811:2839674283967428406871014Salmonella enterica subsp. enterica serovar Agona str. SL483,high-affinity nickel transport protein2e-61236
NC_014117:2684631:2687539268753926885581020Burkholderia sp. CCGE1002 chromosome chromosome 1, completehigh-affinity nickel-transporter1e-60233
NC_010067:171053:1763651763651773781014Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-60233
NC_013592:2059138:2068021206802120690461026Dickeya dadantii Ech586, complete genomehigh-affinity nickel-transporter5e-59228
NC_012632:1212780:1229441122944112305351095Sulfolobus islandicus M.16.27 chromosome, complete genomehigh-affinity nickel-transporter5e-59228
NC_012588:1118945:1138990113899011400841095Sulfolobus islandicus M.14.25 chromosome, complete genomehigh-affinity nickel-transporter5e-59228
NC_017275:927814:9451549451549462511098Sulfolobus islandicus HVE10/4 chromosome, complete genomehigh-affinity nickel-transporter2e-57222
NC_014618:1040381:1044296104429610453181023Enterobacter cloacae SCF1 chromosome, complete genomehigh-affinity nickel-transporter3e-56219
NC_008699:2260606:2271013227101322720561044Nocardioides sp. JS614, complete genomehigh-affinity nickel-transporter5e-48191
NC_011886:404661:4180224180224190651044Arthrobacter chlorophenolicus A6, complete genomehigh-affinity nickel-transporter2e-43176
NC_012803:361127:3765773765773776351059Micrococcus luteus NCTC 2665, complete genomehigh-affinity nickel-transporter, HoxN/HupN/NixA family1e-38160
NC_010336:852915:870649870649871578930Francisella philomiragia subsp. philomiragia ATCC 25017, completehigh-affinity nickel-transporter4e-34145
NC_015518:222000:222231222231222617387Acidianus hospitalis W1 chromosome, complete genomenickel transporter7e-21101
NC_016616:1182125:120109712010971201906810Dechlorosoma suillum PS chromosome, complete genomehigh-affinity nickel permease5e-0962.4