Pre_GI: BLASTP Hits

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Query: NC_017986:4790482:4824966 Pseudomonas putida ND6 chromosome, complete genome

Start: 4824966, End: 4825310, Length: 345

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:5632591:5657225565722556585051281Pseudomonas putida F1, complete genomeDNA-directed DNA polymerase5e-55212
NC_004129:2234851:2244215224421522454951281Pseudomonas fluorescens Pf-5, complete genomeultraviolet light resistance protein B, interruption-C7e-41165
NC_004129:5373886:5421354542135454226251272Pseudomonas fluorescens Pf-5, complete genomeultraviolet light resistance protein B, interruption-C1e-40165
NC_007005:1605000:1612927161292716142071281Pseudomonas syringae pv. syringae B728a, complete genomeDNA-directed DNA polymerase6e-40162
NC_012660:3689223:370123337012333701637405Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-39161
NC_016830:3869572:3877640387764038789171278Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuC2e-39161
NC_007275:1:2175217534581284Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeRulB protein8e-39158
NC_005773:866157:9245179245179255331017Pseudomonas syringae pv. phaseolicola 1448A, complete genomeRulB1e-37155
NC_016830:4999946:5011546501154650128231278Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuC9e-37152
NC_009434:3611738:3625281362528136262911011Pseudomonas stutzeri A1501, complete genomeimpB/mucB/samB family protein3e-36150
NC_015740:2998500:2999374299937430005281155Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeimpB/mucB/samB family protein3e-36150
NC_007005:1705406:172438317243831724826444Pseudomonas syringae pv. syringae B728a, complete genome6e-33139
NC_010322:5349000:536594753659475366450504Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein2e-28124
NC_009656:44500:9539895398964801083Pseudomonas aeruginosa PA7 chromosome, complete genomeultraviolet light resistance protein B1e-1995.5
NC_015410:2351464:2380712238071223819711260Pseudomonas mendocina NK-01 chromosome, complete genomeultraviolet light resistance protein B2e-1891.3
NC_015222:2475792:2495405249540524967001296Nitrosomonas sp. AL212 chromosome, complete genomeDNA-directed DNA polymerase2e-1787.8
NC_015970:19850:2427124271255301260Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, completeDNA-directed DNA polymerase9e-1785.5
NC_015731:2400526:2420024242002424211001077Nitrosomonas sp. Is79A3 chromosome, complete genome9e-1682.4
NC_015731:2460248:2458963245896324602551293Nitrosomonas sp. Is79A3 chromosome, complete genomeUMUC domain-containing protein DNA-repair protein2e-1580.9
NC_014394:2577949:2587767258776725890411275Gallionella capsiferriformans ES-2 chromosome, complete genomeDNA-directed DNA polymerase3e-1580.5
NC_003902:3514000:3524399352439935256851287Xanthomonas campestris pv. campestris str. ATCC 33913, completepolymerase V subunit3e-1580.5
NC_006677:2575345:2579904257990425811661263Gluconobacter oxydans 621H, complete genomeSOS (error prone) mutagenesis protein UmuC4e-1580.1
NC_014910:1912552:1919375191937519206611287Alicycliphilus denitrificans BC chromosome, complete genomeDNA-directed DNA polymerase6e-1579.7
NC_009648:1541699:1596110159611015971981089Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA polymerase V subunit UmuC2e-1477.8
NC_008573:195317:233152233152233817666Shewanella sp. ANA-3 plasmid 1, complete sequenceumuC protein2e-1477.8
NC_011283:2836000:2880660288066028817781119Klebsiella pneumoniae 342 chromosome, complete genome2e-1477.8
NC_017046:2026672:2036821203682120380891269Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA repair protein3e-1477
NC_016863:2029340:2039489203948920407571269Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit UmuC3e-1477
NC_016857:2027311:2037460203746020387281269Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit UmuC3e-1477
NC_016856:2085283:2091297209129720925651269Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit UmuC3e-1477
NC_016810:2027311:2037460203746020387281269Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein3e-1477
NC_010488:48868:660686606866457390Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence5e-1476.6
NC_016514:2476359:2487016248701624882841269Enterobacter cloacae EcWSU1 chromosome, complete genomeUmuC6e-1476.3
NC_013850:1887556:1936856193685619381211266Klebsiella variicola At-22 chromosome, complete genomeDNA-directed DNA polymerase6e-1476.3
NC_009837:155284:157431157431157778348Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequencehypothetical protein5e-1476.3
NC_007626:2204767:2245935224593522472121278Magnetospirillum magneticum AMB-1, complete genomeNucleotidyltransferase/DNA polymerase involved in DNA repair7e-1475.9
NC_009436:2395913:2403234240323424045021269Enterobacter sp. 638, complete genomeDNA polymerase V subunit UmuC8e-1475.9
NC_015663:4735808:4743545474354547448101266Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA polymerase V subunit UmuC9e-1475.5
NC_011283:3177350:3185304318530431865691266Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuC1e-1375.5
NC_015663:4488058:4499510449951045007751266Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA polymerase V subunit UmuC1e-1375.1
NC_008321:3815940:3837529383752938387851257Shewanella sp. MR-4, complete genomeDNA-directed DNA polymerase2e-1374.7
NC_004631:948054:9817399817399830071269Salmonella enterica subsp. enterica serovar Typhi Ty2, completeDNA polymerase IV2e-1374.3
NC_016832:948029:9794149794149806821269Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1374.3
NC_020541:1786500:1806286180628618075751290Rhodanobacter sp. 2APBS1, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair2e-1374.3
NC_020260:1293860:1300668130066813019301263Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuC13e-1373.9
NC_009778:1222273:1227942122794212291261185Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1373.9
NC_007963:1552761:1564357156435715656371281Chromohalobacter salexigens DSM 3043, complete genomeDNA-directed DNA polymerase3e-1373.9
NC_014532:3596097:3628379362837936296561278Halomonas elongata DSM 2581, complete genomeDNA-directed DNA polymerase4e-1373.6
NC_011745:1287714:1311024131102413122861263Escherichia coli ED1a chromosome, complete genomeDNA polymerase V subunit UmuC5e-1373.2
NC_021066:1778000:1784007178400717852721266Raoultella ornithinolytica B6, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair7e-1372.8
NC_015761:1599000:1604619160461916058841266Salmonella bongori NCTC 12419, complete genomeDNA repair protein7e-1372.8
NC_013282:1842412:1849918184991818511801263Cronobacter turicensis, complete genomeProtein umuC6e-1372.8
NC_008253:1228485:1251657125165712529251269Escherichia coli 536, complete genomeUmuC protein6e-1372.8
NC_011601:1315746:1337755133775513390231269Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA polymerase V subunit UmuC6e-1372.8
NC_004431:1443968:1468502146850214697701269Escherichia coli CFT073, complete genomeDNA polymerase IV6e-1372.8
NC_011751:1446073:1477461147746114787291269Escherichia coli UMN026 chromosome, complete genomeDNA polymerase V subunit UmuC8e-1372.4
NC_015572:2186394:2186394218639421876951302Methylomonas methanica MC09 chromosome, complete genomeDNA-directed DNA polymerase9e-1372.4
NC_016002:1741109:1748926174892617501911266Pseudogulbenkiania sp. NH8B, complete genomeDNA-directed DNA polymerase1e-1272
NC_016002:2179969:2187277218727721885421266Pseudogulbenkiania sp. NH8B, complete genomeDNA-directed DNA polymerase1e-1272
NC_009801:1296488:1321867132186713231351269Escherichia coli E24377A, complete genomeprotein UmuC1e-1271.6
NC_010473:1245284:1270650127065012719181269Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase V, subunit C1e-1271.6
NC_012967:1205985:1231336123133612326041269Escherichia coli B str. REL606 chromosome, complete genomeDNA polymerase V subunit UmuC1e-1271.6
NC_021066:2197490:2204060220406022053251266Raoultella ornithinolytica B6, complete genomeDNA polymerase V subunit UmuC2e-1271.2
NC_007516:1086948:1105898110589811071721275Synechococcus sp. CC9605, complete genomeDNA-directed DNA polymerase3e-1270.5
NC_020418:2868000:2880167288016728811771011Morganella morganii subsp. morganii KT, complete genomeError-prone, lesion bypass DNA polymerase V (UmuC)3e-1270.5
NC_012125:4536383:4555441455544145567151275Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA polymerase V subunit UmuC4e-1270.1
NC_003198:4453457:4472479447247944737531275Salmonella enterica subsp. enterica serovar Typhi str. CT18,DNA polymerase IV4e-1270.1
NC_011742:1221416:1245958124595812472261269Escherichia coli S88 chromosome, complete genomeDNA polymerase V subunit UmuC4e-1270.1
NC_016832:4425330:4444352444435244456261275Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-1270.1
NC_008341:29038:4657946579478741296Nitrosomonas eutropha C91 plasmid1, complete sequenceDNA-directed DNA polymerase5e-1269.7
NC_009792:1739970:1746105174610517473701266Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-1269.3
NC_015167:1154497:1154497115449711557531257Cellulophaga lytica DSM 7489 chromosome, complete genomeDNA-directed DNA polymerase7e-1269.3
NC_004459:349500:3706513706513719071257Vibrio vulnificus CMCP6 chromosome I, complete sequenceNucleotidyltransferase/DNA polymerase involved in DNA repair8e-1268.9
NC_009052:4168776:4175354417535441766101257Shewanella baltica OS155, complete genomeDNA-directed DNA polymerase1e-1168.6
NC_004349:3938:1007810078113341257Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceSOS mutagenesis protein RulB1e-1168.6
NC_012988:1777618:179044317904431790928486Methylobacterium extorquens DM4, complete genomehypothetical protein1e-1168.6
NC_005071:671084:6898236898236910971275Prochlorococcus marinus str. MIT 9313, complete genomeputative UmuC protein1e-1168.2
NC_016816:4129299:4158370415837041593981029Pantoea ananatis LMG 5342, complete genomeDNA polymerase V subunit UmuC1e-1168.2
NC_009436:2056000:2070165207016520714271263Enterobacter sp. 638, complete genomeDNA-directed DNA polymerase2e-1167.8
NC_011761:1499500:1513748151374815150311284Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeumuC protein2e-1167.8
NC_010334:2615260:2641539264153926427921254Shewanella halifaxensis HAW-EB4, complete genomeDNA-directed DNA polymerase3e-1167
NC_020054:4983691:4993524499352449948101287Fibrella aestuarina BUZ 2 drat genomeDNA polymerase V4e-1167
NC_016816:2925459:2936866293686629381281263Pantoea ananatis LMG 5342, complete genomeDNA polymerase V subunit UmuC4e-1166.6
NC_017047:1934430:1944000194400019452651266Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase V subunit UmuC8e-1165.9
NC_020064:1962172:1974884197488419761521269Serratia marcescens FGI94, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair8e-1165.9
NC_014733:1573171:1588662158866215899541293Methylovorus sp. MP688 chromosome, complete genomeDNA-directed DNA polymerase8e-1165.9
NC_015566:3269469:3277699327769932789671269Serratia sp. AS12 chromosome, complete genomeDNA-directed DNA polymerase1e-1065.5
NC_012969:1574330:1589660158966015909521293Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeDNA-directed DNA polymerase1e-1065.1
NC_012668:3037345:3058519305851930596221104Vibrio cholerae MJ-1236 chromosome 1, complete sequenceerror-prone repair protein UmuC2e-1064.7
NC_016445:89500:8996389963911351173Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA polymerase V2e-1064.7
NC_014733:1073540:1081149108114910824411293Methylovorus sp. MP688 chromosome, complete genomeDNA-directed DNA polymerase2e-1064.3
NC_010334:2615260:2621348262134826226011254Shewanella halifaxensis HAW-EB4, complete genomeDNA-directed DNA polymerase2e-1064.3
NC_016901:2661971:266591426659142666699786Shewanella baltica OS678 chromosome, complete genome3e-1063.9
NC_010554:2646806:2725243272524327265111269Proteus mirabilis HI4320, complete genomeDNA repair protein3e-1063.9
NC_009997:2699644:270601227060122706782771Shewanella baltica OS195, complete genomeDNA-directed DNA polymerase3e-1063.5
NC_014733:1223359:1230133123013312314251293Methylovorus sp. MP688 chromosome, complete genomeDNA-directed DNA polymerase4e-1063.5
NC_010943:3069082:3084429308442930857181290Stenotrophomonas maltophilia K279a, complete genomeputative UV protection and mutation protein4e-1063.5
NC_009927:253250:2550982550982563631266Acaryochloris marina MBIC11017 plasmid pREB2, complete sequenceDNA polymerase V, putative8e-1062.4
NC_015703:4483500:4516981451698145182491269Runella slithyformis DSM 19594 chromosome, complete genomeDNA-directed DNA polymerase1e-0962
NC_009997:5188221:5208740520874052099961257Shewanella baltica OS195, complete genomeDNA-directed DNA polymerase2e-0961.2
NC_009665:5072413:5091613509161350928691257Shewanella baltica OS185 chromosome, complete genomeDNA-directed DNA polymerase2e-0961.2
NC_016901:5130147:5149362514936251506181257Shewanella baltica OS678 chromosome, complete genomeDNA-directed DNA polymerase2e-0961.2
NC_014842:19411:4458444584458581275Pantoea sp. At-9b plasmid pPAT9B05, complete sequenceDNA-directed DNA polymerase2e-0961.2
NC_008255:1701195:1719517171951717207791263Cytophaga hutchinsonii ATCC 33406, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair2e-0961.2
NC_009453:36599:5178151781530791299Arthrobacter sp. Rue61a plasmid pAL1, complete sequenceputative UmuC-like protein3e-0960.5
NC_015424:2726223:2763991276399127652681278Aeromonas veronii B565 chromosome, complete genomeprotein UmuC4e-0960.1
NC_011894:6888562:691837069183706918834465Methylobacterium nodulans ORS 2060, complete genomehypothetical protein9e-0958.9
NC_011894:7109374:7118741711874171200691329Methylobacterium nodulans ORS 2060, complete genomeUMUC domain protein DNA-repair protein2e-0857.8
NC_010725:356609:3586503586503598911242Methylobacterium populi BJ001, complete genome5e-0856.6
NC_010172:3894652:3897842389784238992781437Methylobacterium extorquens PA1, complete genomeDNA-directed DNA polymerase5e-0856.6
NC_016609:8251438:8251438825143882527211284Niastella koreensis GR20-10 chromosome, complete genomeDNA-directed DNA polymerase5e-0856.6
NC_011881:1:4351435156311281Arthrobacter chlorophenolicus A6 plasmid pACHL02, completeDNA-directed DNA polymerase7e-0856.2
NC_012968:2000218:201294120129412013399459Methylotenera mobilis JLW8, complete genome7e-0855.8
NC_013282:1842412:185728818572881857563276Cronobacter turicensis, complete genomehypothetical protein8e-0855.8
NC_010510:534024:5400675400675413951329Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeDNA-directed DNA polymerase1e-0755.5
NC_007604:1586243:1606746160674616080021257Synechococcus elongatus PCC 7942, complete genomeDNA-directed DNA polymerase1e-0755.5
NC_006576:2683467:7716771689721257Synechococcus elongatus PCC 6301, complete genomeDNA polymerase V1e-0755.5
NC_012988:4262631:4265341426534142666721332Methylobacterium extorquens DM4, complete genomeDNA polymerase V subunit C9e-0855.5
NC_015424:3520783:3553264355326435545231260Aeromonas veronii B565 chromosome, complete genomeprotein UmuC9e-0855.5
NC_016776:2237404:2239666223966622409491284Bacteroides fragilis 638R, complete genomeputative RumB/ImpB like DNA repair protein1e-0755.1
NC_014305:97055:1108391108391121131275Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDNA polymerase V subunit1e-0755.1
NC_006347:2190000:2190977219097721922601284Bacteroides fragilis YCH46, complete genomeSOS mutagenesis and repair protein UmuC homolog1e-0755.1
NC_010725:1419272:1469060146906014702381179Methylobacterium populi BJ001, complete genome1e-0755.1
NC_011757:276953:2927672927672940981332Methylobacterium chloromethanicum CM4, complete genomeDNA-directed DNA polymerase2e-0754.7
NC_008570:1143578:1164200116420011654591260Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuC2e-0754.3
NC_003228:2245181:2248666224866622499491284Bacteroides fragilis NCTC 9343, complete genomeputative RumB/ImpB like DNA repair protein5e-0753.1
NC_008570:2216736:2248997224899722502711275Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuC9e-0752.4
NC_011894:5056901:507349250734925074133642Methylobacterium nodulans ORS 2060, complete genomehypothetical protein1e-0652
NC_020260:1293860:1306660130666013078411182Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuC12e-0650.8
NC_016860:4024000:403053540305354030786252Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-0650.8
NC_008757:151862:1550911550911562391149Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeUMUC domain protein DNA-repair protein3e-0650.8