Pre_GI: BLASTP Hits

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Query: NC_017168:3535786:3544872 Yersinia pestis A1122 chromosome, complete genome

Start: 3544872, End: 3545387, Length: 516

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008149:2517538:253577225357722536329558Yersinia pestis Nepal516, complete genomehypothetical protein8e-97352
NC_005810:1663672:167309716730971673675579Yersinia pestis biovar Microtus str. 91001, complete genomeintegrase1e-96351
NC_017265:2306500:232086923208692321384516Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Integrase1e-96351
NC_003143:2101902:211562621156262116141516Yersinia pestis CO92, complete genomehypothetical protein1e-96351
NC_008150:1384102:139870513987051399262558Yersinia pestis Antiqua, complete genomehypothetical protein3e-96350
NC_009381:1414985:142000214200021420559558Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-96350
NC_009708:2537557:2555953255595325569691017Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage integrase family site specific recombinase6e-91332
CP002797:4812799:4826760482676048278061047Escherichia coli NA114, complete genomePutative integrase5e-68256
NC_007712:1954808:1974024197402419750401017Sodalis glossinidius str. 'morsitans', complete genomephage integrase2e-63241
NC_016816:2953530:2977372297737229783941023Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family1e-59228
NC_012779:2127542:2148941214894121499511011Edwardsiella ictaluri 93-146, complete genomesite-specific recombinase, phage integrase family2e-58224
NC_006155:2116834:2128303212830321293251023Yersinia pseudotuberculosis IP 32953, complete genomeputative integrase5e-58223
NC_007712:2028500:2057823205782320588451023Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase1e-45181
NC_007712:1926500:193080019308001931645846Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase6e-44176
NC_007712:1712667:171266717126671713602936Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase8e-43172
NC_011294:2053991:205795920579592058948990Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase3e-41167
NC_011205:2180598:218594621859462186935990Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase protein3e-41167
NC_020181:2097066:2117522211752221185741053Enterobacter aerogenes EA1509E, complete genomePutative integrase2e-39161
NC_015942:403296:4159944159944170011008Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein2e-27121
NC_011770:860944:8639658639658650141050Pseudomonas aeruginosa LESB58, complete genomeIntegrase3e-1684.7
NC_008027:2331617:2337757233775723388061050Pseudomonas entomophila L48, complete genomesite-specific recombinase, integrase family1e-1582.8
NC_017986:4931104:4946514494651449475211008Pseudomonas putida ND6 chromosome, complete genomephage integrase7e-1579.7
NC_017033:1052000:1053148105314810541671020Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerC3e-1477.8
NC_012660:3689223:370301937030193703990972Pseudomonas fluorescens SBW25 chromosome, complete genomeintegrase (pseudogene)1e-1272.8
NC_017986:4885979:4888798488879848898621065Pseudomonas putida ND6 chromosome, complete genomeintegrase1e-1272
NC_007005:3414579:3419554341955434205881035Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase:Phage integrase, N-terminal SAM-like2e-1272
NC_011770:2690501:2690501269050126915261026Pseudomonas aeruginosa LESB58, complete genomesite-specific recombinase, phage integrase family3e-1271.2
NC_010511:4313769:4325412432541243264611050Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein3e-1271.2
NC_002947:4484824:449569044956904496649960Pseudomonas putida KT2440, complete genomesite-specific recombinase, phage integrase family7e-1166.6
NC_012724:359444:3783543783543793821029Burkholderia glumae BGR1 chromosome 1, complete genomePhage integrase:Phage integrase, N-terminal SAM-like protein1e-1065.9
NC_012724:359444:3687393687393697581020Burkholderia glumae BGR1 chromosome 1, complete genomePhage-related integrase3e-1064.3
NC_009654:615504:6208096208096219241116Marinomonas sp. MWYL1, complete genomehypothetical protein2e-0962
NC_014837:1570500:157833915783391578668330Pantoea sp. At-9b chromosome, complete genome6e-0960.1
NC_014722:846084:8501788501788513681191Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein2e-0858.2
NC_014972:480355:4934964934964946591164Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein5e-0857
NC_010002:5143869:5157818515781851588461029Delftia acidovorans SPH-1, complete genomeintegrase family protein8e-0856.6
NC_007494:714525:7351117351117362321122Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative integrase1e-0755.5
NC_011770:2499432:2540392254039225415041113Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative4e-0754.3
NC_009952:366959:3847653847653859581194Dinoroseobacter shibae DFL 12, complete genomephage integrase family protein2e-0652
NC_009656:2663387:266807926680792668627549Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family protein4e-0650.8