Pre_GI: BLASTP Hits

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Query: NC_017168:3192817:3197043 Yersinia pestis A1122 chromosome, complete genome

Start: 3197043, End: 3197393, Length: 351

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009655:195500:207716207716208648933Actinobacillus succinogenes 130Z chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-22105
NC_015588:1847500:185576418557641856759996Isoptericola variabilis 225 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator6e-22102
NC_015968:1165829:116906511690651170006942Enterobacter asburiae LF7a chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-2097.4
NC_014532:3479674:348872534887253489708984Halomonas elongata DSM 2581, complete genomeABC-type transport system periplasmic substrate-binding protein6e-1579.7
NC_010184:661226:672022672022672945924Bacillus weihenstephanensis KBAB4, complete genomeMonosaccharide-transporting ATPase3e-1477
NC_000853:960248:975775975775976746972Thermotoga maritima MSB8, complete genomeribose ABC transporter, periplasmic ribose-binding protein8e-1475.9
NC_011978:1581994:158656415865641587544981Thermotoga neapolitana DSM 4359, complete genomeRibose ABC transporter, periplasmic ribose-binding protein8e-1475.5
NC_006510:1921541:192787719278771928833957Geobacillus kaustophilus HTA426, complete genomesugar ABC transporter (sugar-binding protein)4e-1373.6
NC_011969:726369:736252736252737178927Bacillus cereus Q1 chromosome, complete genomeribose ABC transporter substrate-binding protein5e-1373.2
NC_016771:701909:714612714612715538927Bacillus cereus NC7401, complete genomeribose ABC transporter substrate-binding protein5e-1373.2
NC_011772:647778:658732658732659658927Bacillus cereus G9842, complete genomeribose ABC transporter, ribose-binding protein6e-1372.8
NC_011725:681387:690825690825691751927Bacillus cereus B4264 chromosome, complete genomeribose ABC transporter ribose-binding protein6e-1372.8
NC_005957:667954:677838677838678764927Bacillus thuringiensis serovar konkukian str. 97-27, completeribose ABC transporter, ribose-binding protein8e-1372.4
NC_003997:674265:686955686955687881927Bacillus anthracis str. Ames, complete genomeribose ABC transporter, ribose-binding protein1e-1272
NC_005945:674337:686851686851687777927Bacillus anthracis str. Sterne, complete genomeribose ABC transporter, ribose-binding protein1e-1272
NC_007530:674265:686956686956687882927Bacillus anthracis str. 'Ames Ancestor', complete genomeribose abc transporter, ribose-binding protein1e-1272
NC_011773:688689:701393701393702319927Bacillus cereus AH820 chromosome, complete genomeribose ABC transporter ribose-binding protein1e-1272
NC_012659:678289:686856686856687782927Bacillus anthracis str. A0248, complete genomeribose ABC transporter, ribose-binding protein1e-1272
NC_016779:657568:668365668365669291927Bacillus cereus F837/76 chromosome, complete genomeribose ABC transporter substrate-binding protein RbsB1e-1272
NC_017208:671128:682902682902683828927Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemethylthioribose-binding protein9e-1372
NC_006274:659922:675287675287676213927Bacillus cereus E33L, complete genomeribose ABC transporter, ribose-binding protein1e-1272
NC_014650:2143033:215129121512912152265975Geobacillus sp. Y4.1MC1 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-1271.2
NC_015161:1556766:156531915653191566305987Deinococcus proteolyticus MRP chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-1270.5
NC_014364:3707311:372173937217393722686948Spirochaeta smaragdinae DSM 11293 chromosome, complete genomesugar ABC transporter (sugar-binding protein)5e-1269.7
NC_010556:2328303:234419623441962345110915Exiguobacterium sibiricum 255-15, complete genomeperiplasmic binding protein/LacI transcriptional regulator7e-1269.3
NC_012785:638000:649402649402650280879Kosmotoga olearia TBF 19.5.1, complete genomeperiplasmic binding protein/LacI transcriptional regulator7e-1269.3
NC_015589:1468774:149197714919771492936960Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator8e-1268.9
NC_016614:686887:702059702059702937879Vibrio sp. EJY3 chromosome 2, complete sequenceD-ribose transporter subunit RbsB2e-1168.2
NC_012559:1635922:163844016384401639369930Laribacter hongkongensis HLHK9, complete genomeRbsB4e-1166.6
NC_018665:2163713:218209821820982183012915Exiguobacterium antarcticum B7 chromosome, complete genomePeriplasmic binding protein/LacI transcriptional regulator5e-1166.2
NC_003155:6444500:6444518644451864464641947Streptomyces avermitilis MA-4680, complete genomeD-ribose ABC transporter permease protein6e-1166.2
NC_016113:11500:2570925709276581950Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceD-ribose ABC transporter permease8e-1165.9
NC_004557:2475030:248810824881082488662555Clostridium tetani E88, complete genomeD-ribose-binding periplasmic protein6e-1062.8
NC_014039:15236:203392033921280942Propionibacterium acnes SK137 chromosome, complete genomeribose ABC transport system, permease protein RbsC/ribose ABC transport system, periplasmic ribose-binding protein RbsB1e-0961.6
NC_013205:2332174:233878923387892339754966Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,periplasmic binding protein/LacI transcriptional regulator2e-0961.6
NC_015519:686027:7030847030847040851002Tepidanaerobacter sp. Re1 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-0961.2
NC_016633:1898234:190752919075291908491963Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesugar ABC transporter periplasmic protein2e-0960.8
NC_013521:107937:110667110667111626960Sanguibacter keddieii DSM 10542, complete genomemonosaccharide-binding protein3e-0960.8
NC_016512:15102:202062020621147942Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeperiplasmic sugar-binding protein3e-0960.8
NC_016511:15100:202042020421145942Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeperiplasmic sugar-binding protein3e-0960.8
NC_016516:15102:202062020621147942Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeperiplasmic sugar-binding protein3e-0960.8
NC_015687:1478668:149652614965261497485960Clostridium acetobutylicum DSM 1731 chromosome, complete genomeperiplasmic sugar-binding protein3e-0960.5
NC_013929:6526745:653297265329726533718747Streptomyces scabiei 87.22 chromosome, complete genomecarbohydrate-binding protein3e-0960.5
NC_017218:1655009:167658716765871677531945Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeD-ribose-binding periplasmic protein4e-0960.1
NC_006085:15246:203502035021291942Propionibacterium acnes KPA171202, complete genomeperiplasmic sugar-binding protein4e-0960.1
NC_012691:2146473:215675721567572157689933Tolumonas auensis DSM 9187, complete genomeperiplasmic binding protein/LacI transcriptional regulator7e-0959.3
NC_009053:1895485:189800218980021898874873Actinobacillus pleuropneumoniae L20, complete genomeD-ribose-binding periplasmic protein precursor7e-0959.3
NC_010939:1920781:192330219233021924174873Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeD-ribose-binding periplasmic protein precursor7e-0959.3
NC_020911:3076791:3091251309125130922971047Octadecabacter antarcticus 307, complete genomesugar ABC transporter periplasmatic substrate-binding protein2e-0857.8
NC_021177:7159654:7177869717786971798241956Streptomyces fulvissimus DSM 40593, complete genomeD-ribose ABC transporter permease protein3e-0857.4
NC_003143:1059580:105958010595801060539960Yersinia pestis CO92, complete genomeputative sugar ABC transporter periplasmic binding protein4e-0856.6
NC_013721:1581370:159778915977891598727939Gardnerella vaginalis 409-05, complete genomeperiplasmic binding protein and sugar binding domain of the LacI family protein7e-0855.8
NC_006155:3805640:380564038056403806599960Yersinia pseudotuberculosis IP 32953, complete genomeputative sugar ABC transporter periplasmic binding protein8e-0855.8
NC_015566:2039431:206700920670092067938930Serratia sp. AS12 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-0755.5
NC_013353:5022196:502219650221965023131936Escherichia coli O103:H2 str. 12009, complete genomeD-allose-binding periplasmic protein1e-0755.1
AP010958:5022196:502219650221965023131936Escherichia coli O103:H2 str. 12009 DNA, complete genomeD-allose-binding periplasmic protein1e-0755.1
NC_018531:1991218:199227719922771993245969Arthrobacter sp. Rue61a chromosome, complete genomeD-ribose-binding protein RbsB2e-0754.7
NC_008253:4541915:454383245438324544773942Escherichia coli 536, complete genomeD-allose-binding periplasmic protein precursor4e-0753.5
NC_008563:4656000:465777346577734658714942Escherichia coli APEC O1, complete genomeD-allose-binding periplasmic protein precursor4e-0753.5
NC_004431:4867648:487026648702664871207942Escherichia coli CFT073, complete genomeD-allose-binding periplasmic protein precursor4e-0753.5
NC_011750:4719477:471947747194774720412936Escherichia coli IAI39 chromosome, complete genomeD-allose transporter subunit5e-0753.1
NC_011742:4569683:457230145723014573236936Escherichia coli S88 chromosome, complete genomeD-allose transporter subunit5e-0753.1
NC_000913:4307471:430913043091304310065936Escherichia coli K12, complete genomeD-allose transporter subunit4e-0753.1
NC_010468:4305105:432191943219194322854936Escherichia coli ATCC 8739, complete genomeMonosaccharide-transporting ATPase4e-0753.1
CP002516:4431235:444855644485564449491936Escherichia coli KO11, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-0753.1
NC_010473:4409492:440949244094924410427936Escherichia coli str. K-12 substr. DH10B, complete genomeD-allose transporter subunit; periplasmic-binding component of ABC superfamily4e-0753.1
AC_000091:4313167:431578543157854316720936Escherichia coli W3110 DNA, complete genomeD-allose transporter subunit4e-0753.1
NC_012759:4247865:424786542478654248800936Escherichia coli BW2952 chromosome, complete genomeD-allose transporter subunit4e-0753.1
NC_012947:4106031:412324441232444124179936Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeD-allose transporter subunit4e-0753.1
NC_012967:4289929:428992942899294290864936Escherichia coli B str. REL606 chromosome, complete genomeD-allose transporter subunit4e-0753.1
NC_016902:4431235:444855644485564449491936Escherichia coli KO11FL chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-0753.1
NC_011415:4582388:458238845823884583323936Escherichia coli SE11 chromosome, complete genomeD-allose transporter subunit6e-0752.8
NC_015425:2024154:204235720423572043271915Clostridium botulinum BKT015925 chromosome, complete genomeribose ABC transporter periplasmic D-ribose-binding protein1e-0652
NC_010498:4656716:465671646567164657657942Escherichia coli SMS-3-5, complete genomeD-allose-binding periplasmic protein AlsB1e-0652
NC_015578:3914189:393737439373743938363990Treponema primitia ZAS-2 chromosome, complete genomeD-ribose-binding periplasmic protein2e-0651.2
NC_009328:1903291:192429219242921925248957Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeD-ribose-binding periplasmic protein3e-0650.8
NC_016633:2655811:266334826633482664292945Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesugar ABC transporter periplasmic protein2e-0650.8
NC_018604:1263927:128147612814761282471996Brachyspira pilosicoli WesB complete genomeD-allose-binding periplasmic protein3e-0650.4
NC_014364:815346:849154849154850110957Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-0650.4
NC_002516:2113186:213085421308542131813960Pseudomonas aeruginosa PAO1, complete genomebinding protein component precursor of ABC ribose transporter4e-0650.4
NC_017954:934616:9372219372219382581038Thermogladius cellulolyticus 1633 chromosome, complete genomesugar ABC transporter periplasmic protein4e-0650.1
NC_010634:4463727:446372744637274464671945Yersinia pseudotuberculosis PB1/+, complete genomeperiplasmic binding protein/LacI transcriptional regulator5e-0649.7
NC_019978:2506472:2521843252184325228861044Halobacteroides halobius DSM 5150, complete genomeABC-type sugar transport system, periplasmic component6e-0649.3
NC_003317:392271:409632409632410609978Brucella melitensis 16M chromosome I, complete sequenceD-RIBOSE-BINDING PERIPLASMIC PROTEIN PRECURSOR8e-0648.9
NC_007348:752692:775547775547776515969Ralstonia eutropha JMP134 chromosome 2, complete sequencePeriplasmic binding protein/LacI transcriptional regulator9e-0648.9