Pre_GI: BLASTP Hits

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Query: NC_016846:24500:46754 Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,

Start: 46754, End: 52012, Length: 5259

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009378:106193:1061931061931114335241Yersinia pestis Pestoides F plasmid MT, complete sequenceconjugal transfer nickase/helicase TraI02090
NC_010660:175200:1832651832651882354971Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence02014
NC_007608:97092:1033061033061082044899Shigella boydii Sb227 plasmid pSB4_227, complete sequenceoriT nicking and unwinding protein, fragment01998
NC_007385:157516:1693421693421736254284Shigella sonnei Ss046 plasmid pSS_046, complete sequenceoriT nicking and unwinding protein, fragment01865
NC_007607:87000:96517965171007104194Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceoriT nicking and unwinding protein, fragment01751
NC_004851:191709:2005772005772040773501Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceoriT nicking and unwinding protein01399
NC_017319:192482:2005052005052039543450Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceOriT nicking and unwinding protein01371
NC_017319:192482:1991441991442005081365Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceOriT nicking and unwinding protein8e-165582
NC_004851:191709:1992161992162005801365Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceoriT nicking and unwinding protein1e-163578
NC_007414:56508:8899288992902901299Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequenceDNA helicase1e-127458
NC_009998:62000:6726667266732265961Shewanella baltica OS195 plasmid pS19501, complete sequenceconjugative transfer relaxase protein TraI1e-120436
NC_004460:708416:7159707159707217565787Vibrio vulnificus CMCP6 chromosome II, complete sequenceATP-dependent exoDNAse, alpha subunit5e-99363
NC_007385:157516:175043175043175879837Shigella sonnei Ss046 plasmid pSS_046, complete sequenceoriT nicking and unwinding protein, fragment9e-59230
NC_004851:191709:198803198803199195393Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceoriT nicking and unwinding protein1e-44183
NC_017319:192482:198752198752199123372Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceOriT nicking and unwinding protein9e-45183
NC_009484:2660048:2674385267438526771562772Acidiphilium cryptum JF-5 chromosome, complete genomeexonuclease V subunit alpha5e-44181
NC_007607:87000:100659100659101351693Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceputative DNA helicase I, fragment4e-43178
NC_007607:87000:960909609096509420Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceoriT nicking and unwinding protein, fragment1e-42176
NC_007608:97092:102927102927103346420Shigella boydii Sb227 plasmid pSB4_227, complete sequenceoriT nicking and unwinding protein, fragment6e-42174
NC_008322:1186000:1188914118891411920213108Shewanella sp. MR-7, complete genomeTrwC protein2e-41172
NC_007722:851129:8691878691878720992913Erythrobacter litoralis HTCC2594, complete genomeTrwC protein1e-39167
NC_007794:2304768:2324303232430323259311629Novosphingobium aromaticivorans DSM 12444, complete genomeTrwC protein5e-40167
NC_007722:168937:1893461893461922582913Erythrobacter litoralis HTCC2594, complete genomeTrwC protein2e-39166
NC_016626:1751159:1751159175115917542153057Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative traC, type IV secretion system7e-38160
NC_009007:57804:7601176011793463336Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraI2e-37159
NC_011916:467106:4887684887684915782811Caulobacter crescentus NA1000 chromosome, complete genomeDNA relaxase/conjugal transfer nickase-helicase TrwC5e-35151
NC_015458:327009:3562813562813591782898Pusillimonas sp. T7-7 chromosome, complete genomeTrwC1e-33146
NC_007575:1694877:1701208170120817045463339Sulfurimonas denitrificans DSM 1251, complete genomeexonuclease V subunit alpha3e-33145
NC_015377:34445:5672856728596222895Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequenceTrwC protein2e-32142
NC_011891:1225000:1242880124288012456602781Anaeromyxobacter dehalogenans 2CP-1, complete genomeconjugative relaxase domain protein1e-30137
NC_010606:25090:2872928729308792151Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceTrwC protein3e-30135
NC_016631:3917253:3931643393164339343962754Granulicella mallensis MP5ACTX8 chromosome, complete genomeconjugative relaxase domain-containing protein6e-28127
NC_011296:281930:2901722901722957035532Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein3e-27125
NC_012483:3672768:3676616367661636793962781Acidobacterium capsulatum ATCC 51196, complete genomeconjugative relaxase domain protein2e-25119
NC_014819:25765:4311743117462603144Asticcacaulis excentricus CB 48 plasmid pASTEX02, completeconjugative relaxase domain protein4e-25118
NC_007722:2954876:2959510295951029620652556Erythrobacter litoralis HTCC2594, complete genomehypothetical protein1e-24116
NC_012483:3731542:3754841375484137575942754Acidobacterium capsulatum ATCC 51196, complete genomeconjugative relaxase domain protein8e-24114
NC_013422:991500:1012572101257210154032832Halothiobacillus neapolitanus c2, complete genomeconjugative relaxase domain protein1e-23113
NC_010571:2423732:2437973243797324407052733Opitutus terrae PB90-1, complete genomeconjugative relaxase domain protein9e-22107
NC_010170:3944228:3975774397577439785002727Bordetella petrii, complete genomeconjugal transfer protein4e-21105
NC_015850:1006980:1016198101619810193653168Acidithiobacillus caldus SM-1 chromosome, complete genomeputative TraI protein2e-20102
NC_020453:3950838:3987555398755539886791125Agromonas oligotrophica S58 DNA, complete genomeputative ATP-dependent exoDNAse (exonuclease V) subunit alpha7e-20100
NC_016609:4233701:4273299427329942760132715Niastella koreensis GR20-10 chromosome, complete genomeconjugative relaxase domain-containing protein2e-1999.8
NC_013132:7954000:7969595796959579722072613Chitinophaga pinensis DSM 2588, complete genomeconjugative relaxase domain protein2e-1999.4
NC_015563:3203012:3211320321132032126211302Delftia sp. Cs1-4 chromosome, complete genomeconjugative relaxase domain-containing protein4e-1998.6
NC_013730:2359939:2384855238485523876142760Spirosoma linguale DSM 74, complete genomeconjugative relaxase domain protein2e-1896.3
NC_014830:3387479:3426762342676234300523291Intrasporangium calvum DSM 43043 chromosome, complete genomeTrwC relaxase5e-1481.6
NC_016585:116143:1339371339371372033267Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceputative ATP-dependent exoDNAse4e-1481.6
NC_015671:557720:5632625632625661532892Cellvibrio gilvus ATCC 13127 chromosome, complete genomeTrwC relaxase1e-1380.5
NC_015514:3508022:3522251352225135251422892Cellulomonas fimi ATCC 484 chromosome, complete genomeconjugative relaxase domain-containing protein2e-1276.3
NC_013235:2129982:2155767215576721594623696Nakamurella multipartita DSM 44233, complete genomeTrwC relaxase4e-1275.1
NC_010606:25090:3084530845319811137Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceTrwC protein9e-1273.9
NC_011365:1969198:198678719867871987755969Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTrwC relaxase2e-1172.8
NC_010943:3069082:3094419309441930971992781Stenotrophomonas maltophilia K279a, complete genomeputative conjugal transfer protein TraA6e-1171.6
NC_011991:65368:6536865368694384071Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceTi-type conjugative transfer relaxase TraA7e-1171.2
NC_017955:3670670:3715007371500737204815475Modestobacter marinus, complete genomeDNA primase9e-1170.9
NC_010793:1158279:1162791116279111651962406Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-1070.5
NC_010793:1811401:1869177186917718715432367Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-1070.1
NC_010793:1695716:1698219169821917002312013Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA2e-1069.7
NC_012803:3691:3912039120426443525Micrococcus luteus NCTC 2665, complete genomeconjugative relaxase domain protein, TrwC/TraI family3e-1069.3
NC_017044:702483:7137857137857179214137Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugal transfer protein TraA3e-1068.9
NC_010793:1468849:1475436147543614782402805Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA2e-0966.2
NC_013169:612456:6365886365886401423555Kytococcus sedentarius DSM 20547, complete genomeTrwC relaxase2e-0966.2
NC_008278:6885254:6885254688525468896694416Frankia alni ACN14a, complete genomehypothetical protein; Putative conjugal transfer protein traA3e-0965.9
NC_017028:1030000:1046311104631110504474137Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA3e-0965.5
NC_011027:817311:8179938179938201942202Chlorobaculum parvum NCIB 8327, complete genomehelicase, RecD/TraA family8e-0964.3
NC_012483:729000:752677752677753114438Acidobacterium capsulatum ATCC 51196, complete genomeDNA helicase domain protein1e-0863.5
NC_010793:1922000:1933705193370519347961092Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA2e-0863.2
NC_014158:233733:2645282645282674012874Tsukamurella paurometabola DSM 20162 chromosome, complete genomeTrwC relaxase2e-0863.2
NC_008697:118859:1188591188591247625904Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceDNA primase catalytic core, N-terminal domain3e-0862.8
NC_008699:1673181:1673181167318116785745394Nocardioides sp. JS614, complete genomeDNA primase catalytic core, N-terminal domain3e-0862.4
NC_015508:296856:2968562968563006473792Agrobacterium sp. H13-3 chromosome linear, complete sequenceConjugal transfer protein traA6e-0861.6
NC_017955:3057592:3092495309249530980295535Modestobacter marinus, complete genomeDNA primase6e-0861.6
NC_013757:780835:7808357808357863455511Geodermatophilus obscurus DSM 43160, complete genomeTrwC relaxase5e-0861.6
NC_014550:3316115:3319383331938333220312649Arthrobacter arilaitensis Re117, complete genome5e-0861.6
NC_010793:1695716:1702951170295117046991749Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-0760.5
NC_009256:2945059:2956180295618029578051626Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein1e-0760.5
NC_014217:2020737:2020737202073720236942958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA2e-0760.1
NC_015573:776209:7777177777177798042088Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelicase, RecD/TraA family2e-0760.1
NC_018681:5551000:5551247555124755572405994Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein2e-0760.1
NC_010660:175200:182964182964183155192Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-0759.7
NC_010338:359940:3722873722873751452859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA3e-0758.9
NC_009720:464078:4822914822914852482958Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA5e-0758.5
NC_014816:1592799:1592799159279915960233225Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceti-type conjugative transfer relaxase traa5e-0758.5
NC_009495:183767:2021422021422043762235Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehelicase, RecD/TraA family8e-0757.8
NC_009720:2945655:2945655294565529485852931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA7e-0757.8
NC_009720:251703:2737272737272766572931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA7e-0757.8
NC_010172:5447189:83038303105042202Methylobacterium extorquens PA1, complete genomehelicase, RecD/TraA family7e-0757.8
NC_019673:1988853:2027358202735820317464389Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein9e-0757.4
NC_007958:4371125:4393639439363943967583120Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein9e-0757.4
NC_008609:1976403:2006218200621820084042187Pelobacter propionicus DSM 2379, complete genomehelicase, RecD/TraA family1e-0657.4
NC_011757:5693584:5700531570053157027832253Methylobacterium chloromethanicum CM4, complete genomehelicase, RecD/TraA family1e-0657
NC_014217:2760898:2762803276280327657602958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA2e-0656.6
NC_009921:1611132:1633885163388516385344650Frankia sp. EAN1pec, complete genomeTrwC relaxase2e-0656.2
NC_017955:1667500:1668039166803916735375499Modestobacter marinus, complete genomeDNA primase3e-0655.8
NC_009445:1316000:1316372131637213193262955Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA4e-0655.5
NC_015675:4565500:4576462457646245795093048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA4e-0655.5
NC_015675:5607297:5632354563235456354013048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA4e-0655.5
NC_010511:6067000:6080978608097860832122235Methylobacterium sp. 4-46 chromosome, complete genomerecombinase D5e-0655.1
NC_012796:1600600:1609788160978816126312844Desulfovibrio magneticus RS-1, complete genomeconjugal transfer protein TraA7e-0654.7
NC_002678:763808:7856497856497886963048Mesorhizobium loti MAFF303099, complete genomeprobable conjugal transfer protein traA7e-0654.7
NC_007925:138927:1633911633911664953105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein7e-0654.7
NC_014117:442616:4932384932384955112274Burkholderia sp. CCGE1002 chromosome chromosome 1, completeAAA ATPase6e-0654.7
NC_009445:838281:8382818382818412923012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA6e-0654.7
NC_010338:1216385:1217970121797012208282859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA9e-0654.3