Pre_GI: BLASTP Hits

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Query: NC_016830:5031819:5042249 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5042249, End: 5042896, Length: 648

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011750:5045927:505908250590825059756675Escherichia coli IAI39 chromosome, complete genomerepressor protein phage e14; e14 prophage2e-24112
NC_011742:2863316:286734128673412868015675Escherichia coli S88 chromosome, complete genomerepressor protein phage e14; e14 prophage2e-24112
NC_000913:1188999:120148212014821202156675Escherichia coli K12, complete genomee14 prophage; repressor protein phage e142e-24112
NC_008563:2946391:295003029500302950704675Escherichia coli APEC O1, complete genomeputative phage repressor2e-24112
NC_007946:2931364:293500329350032935677675Escherichia coli UTI89, complete genomeputative phage repressor2e-24112
AC_000091:1191353:120383612038361204510675Escherichia coli W3110 DNA, complete genomerepressor protein phage e142e-24112
NC_010002:2110953:212346721234672124114648Delftia acidovorans SPH-1, complete genomepeptidase S24 and S26 domain protein6e-21100
NC_013446:3034486:304282630428263043365540Comamonas testosteroni CNB-2, complete genomeputative prophage repressor2e-2099.4
NC_015663:4767443:478544147854414786193753Enterobacter aerogenes KCTC 2190 chromosome, complete genomeP22 repressor protein c24e-2097.8
NC_004578:3849835:385799038579903858721732Pseudomonas syringae pv. tomato str. DC3000, complete genomerepressor protein c23e-1891.7
NC_002947:3404000:341945034194503420181732Pseudomonas putida KT2440, complete genomepyocin R2_PP, transcriptional repressor, CI/C2 family1e-1789.7
NC_017986:5509569:552387155238715524602732Pseudomonas putida ND6 chromosome, complete genometranscriptional repressor pyocin R2 PP1e-1686.3
NC_006138:2288261:230836023083602309070711Desulfotalea psychrophila LSv54, complete genomesimilar to repressor protein9e-1580.1
NC_008258:269806:287337287337287969633Shigella flexneri 5 str. 8401, complete genomeputative prophage repressor CI8e-1477
NC_014306:3524980:356790335679033568601699Erwinia billingiae Eb661, complete genomeRepressor protein cI4e-1374.7
NC_010554:2646806:265134526513452651992648Proteus mirabilis HI4320, complete genomephage repressor2e-1272.8
NC_014910:1708045:172518017251801725950771Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein3e-1272
NC_016809:1778000:177820117782011778866666Haemophilus influenzae 10810, complete genomehypothetical protein4e-1271.2
NC_015424:2726223:275560227556022756036435Aeromonas veronii B565 chromosome, complete genomephage repressor5e-1271.2
NC_012779:2184927:220196422019642202635672Edwardsiella ictaluri 93-146, complete genomerepressor protein CI6e-1270.9
NC_011415:2153243:216098621609862161642657Escherichia coli SE11 chromosome, complete genomeputative phage repressor7e-1270.9
NC_015379:4691868:469213346921334692831699Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative phage regulatory protein8e-1270.5
NC_012759:4132527:414282841428284143541714Escherichia coli BW2952 chromosome, complete genomeRepressor protein CI8e-1270.5
NC_009778:2993218:301640330164033017065663Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-1270.5
NC_013941:3182576:319016231901623190836675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein7e-1270.5
NC_011083:374000:385883385883386533651Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,P22 repressor protein c22e-1169.3
NC_017986:4091051:410215841021584102514357Pseudomonas putida ND6 chromosome, complete genomerepressor protein CI3e-1168.9
NC_011601:2614691:261961826196182620331714Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein2e-1168.9
NC_002695:301939:301939301939302652714Escherichia coli O157:H7 str. Sakai, complete genomecI2e-1168.9
NC_002655:301940:301940301940302653714Escherichia coli O157:H7 EDL933, complete genomeputative cI repressor protein for prophage CP-933H2e-1168.9
NC_011353:305820:305820305820306533714Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage repressor2e-1168.9
NC_004578:4499143:452278245227824523486705Pseudomonas syringae pv. tomato str. DC3000, complete genomerepressor protein cI2e-1168.9
NC_009348:1663870:166905016690501669733684Aeromonas salmonicida subsp. salmonicida A449, complete genomephage repressor2e-1168.9
NC_011283:4212000:422109942210994221815717Klebsiella pneumoniae 342 chromosome, complete genomephage repressor protein7e-1167.4
NC_013364:2645438:265235726523572652980624Escherichia coli O111:H- str. 11128, complete genomeputative phage repressor protein CI9e-1167
NC_017328:303987:317642317642318337696Shigella flexneri 2002017 chromosome, complete genomeCI protein8e-1167
NC_013361:1558423:157045615704561571160705Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI1e-1066.2
NC_009783:1956000:195674419567441957409666Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-1066.2
NC_007712:2028500:206857220685722069294723Sodalis glossinidius str. 'morsitans', complete genomephage repressor2e-1066.2
NC_009800:289000:301440301440302090651Escherichia coli HS, complete genomeP22 repressor protein c22e-1065.9
NC_012947:3015985:302163430216343022284651Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeXRE family transcriptional regulator2e-1065.9
NC_013361:3112023:312984531298453130495651Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI2e-1065.9
NC_013941:3300000:330265133026513303301651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeP22 repressor protein c22e-1065.9
NC_012660:3116500:312771631277163128423708Pseudomonas fluorescens SBW25 chromosome, complete genomee14 prophage; putative phage repressor2e-1065.9
NC_013850:1887556:189996518999651900627663Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, XRE family3e-1065.1
NC_011742:1177946:119125811912581191959702Escherichia coli S88 chromosome, complete genomeRepressor protein CI from phage origin4e-1065.1
NC_007946:1239278:125028212502821250935654Escherichia coli UTI89, complete genomeputative CI repressor of bacteriophage4e-1064.7
NC_011601:1039500:105177110517711052424654Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein4e-1064.7
NC_013941:975353:989229989229989882654Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCI protein4e-1064.7
NC_020418:3133831:313802131380213138731711Morganella morganii subsp. morganii KT, complete genomerepressor protein CI4e-1064.7
NC_008563:1175035:118767011876701188365696Escherichia coli APEC O1, complete genomeputative CI repressor of bacteriophage4e-1064.7
NC_007946:2625461:262998526299852630635651Escherichia coli UTI89, complete genomerepressor protein5e-1064.3
NC_007645:605500:605820605820606407588Hahella chejuensis KCTC 2396, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidase)5e-1064.3
NC_004431:3040953:305923330592333059859627Escherichia coli CFT073, complete genomePutative repressor protein of prophage5e-1064.3
NC_004431:1401681:141242714124271412849423Escherichia coli CFT073, complete genomeRepressor protein5e-0961.2
NC_021066:2226826:224423422442342244866633Raoultella ornithinolytica B6, complete genomehypothetical protein5e-0961.2
NC_012731:2083650:209731020973102098035726Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative repressor protein of prophage1e-0860.1
NC_016809:389561:394152394152394811660Haemophilus influenzae 10810, complete genomehypothetical protein2e-0859.3
NC_014837:2354241:235780423578042358529726Pantoea sp. At-9b chromosome, complete genomeXRE family transcriptional regulator2e-0858.9
NC_017047:1906000:190737719073771908024648Rahnella aquatilis HX2 chromosome, complete genomeputative repressor protein of prophage4e-0858.2
NC_009524:1627414:163576016357601636419660Psychrobacter sp. PRwf-1 chromosome, complete genomeputative prophage repressor4e-0858.2
NC_009708:2537557:255467625546762555386711Yersinia pseudotuberculosis IP 31758 chromosome, complete genomerepressor protein C25e-0857.8
NC_015968:3301958:331235333123533313006654Enterobacter asburiae LF7a chromosome, complete genomephage repressor like XRE family transcriptional regulator6e-0857.8
NC_020418:2910593:291496229149622915621660Morganella morganii subsp. morganii KT, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidases)8e-0857
NC_014640:4293430:433149743314974332201705Achromobacter xylosoxidans A8 chromosome, complete genomerepressor protein C2 domain-containing protein3e-0755.5