Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:2247789:2262208 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 2262208, End: 2262516, Length: 309

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017033:1052000:107177210717721072077306Frateuria aurantia DSM 6220 chromosome, complete genomeputative addiction module antidote protein8e-27119
NC_010939:1986263:202145920214592021767309Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein6e-26115
NC_010278:1918000:194414319441431944451309Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,transcriptional regulator7e-26115
NC_008751:1736512:174539317453931745686294Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeputative transcriptional regulator2e-23107
NC_009655:1357486:136691113669111367201291Actinobacillus succinogenes 130Z chromosome, complete genomeputative transcriptional regulator4e-23106
NC_009802:931129:937689937689937967279Campylobacter concisus 13826, complete genomeprobable addiction module antidote protein2e-21100
NC_017267:2698944:271560627156062715911306Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeputative addiction module antidote protein2e-21100
NC_009337:715500:761974761974762267294Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeputative transcriptional regulator1e-2098.6
NC_011146:3089297:310050831005083100810303Geobacter bemidjiensis Bem, complete genome2e-1994.4
NC_006513:3486558:349299634929963493298303Azoarcus sp. EbN1, complete genomeconserved hypothetical protein, putative regulator7e-1992.4
NC_008751:1762562:178264317826431782906264Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeputative transcriptional regulator5e-1889.7
NC_014972:1510914:152493315249331525232300Desulfobulbus propionicus DSM 2032 chromosome, complete genomeaddiction module antidote protein6e-1889.4
NC_012857:557911:577119577119577577459Ralstonia pickettii 12D chromosome 2, complete genome2e-1787.4
NC_013416:939668:942588942588942884297Aggregatibacter actinomycetemcomitans D11S-1, complete genomeputative transcriptional regulator5e-1786.3
NC_008740:2989856:299684629968462997169324Marinobacter aquaeolei VT8, complete genomeputative transcriptional regulator2e-1684.7
NC_013960:1484824:149436714943671494711345Nitrosococcus halophilus Nc4 chromosome, complete genomeaddiction module antidote protein2e-1684.3
NC_014323:4792048:483557948355794836058480Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein2e-1684
NC_014722:1191380:119545311954531195749297Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein3e-1684
NC_020829:5620826:562475656247565625049294Pseudomonas denitrificans ATCC 13867, complete genomeputative transcriptional regulator4e-1683.6
NC_017059:1727095:173389717338971734196300Rhodospirillum photometricum DSM 122, complete genometranscriptional regulator4e-1683.2
NC_011761:1499500:150040015004001500696297Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein2e-1581.3
NC_011206:1379068:137961713796171379913297Acidithiobacillus ferrooxidans ATCC 53993, complete genomeputative transcriptional regulator2e-1581.3
NC_007275:1:387338734169297Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completetranscriptional regulator, Cro/CI family5e-1579.7
NC_007517:2870657:287595328759532876249297Geobacter metallireducens GS-15, complete genomeputative transcriptional regulator5e-1579.7
NC_011146:3426500:343344034334403433733294Geobacter bemidjiensis Bem, complete genomeputative transcriptional regulator7e-1579.3
NC_011206:1264639:128691812869181287217300Acidithiobacillus ferrooxidans ATCC 53993, complete genomeputative transcriptional regulator9e-1579
NC_014973:54449:647326473265025294Geobacter sp. M18 chromosome, complete genomeaddiction module antidote protein9e-1579
NC_005230:32647:358913589136178288Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequencehypothetical protein2e-1477.4
NC_012751:1988280:200291420029142003213300Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeaddiction module6e-1476.3
NC_009925:1003000:101152210115221011815294Acaryochloris marina MBIC11017, complete genomeaddiction module antitoxin, putative7e-1475.9
NC_005126:3204980:320905132090513209344294Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-1475.5
NC_017986:4124335:414123941412394141589351Pseudomonas putida ND6 chromosome, complete genomeputative transcriptional regulator2e-1374.7
NC_016043:471719:487663487663487956294Taylorella asinigenitalis MCE3 chromosome, complete genomeputative antitoxin2e-1374.3
NC_010678:114000:133388133388133783396Ralstonia pickettii 12J chromosome 2, complete sequenceputative transcriptional regulator2e-1374.3
NC_010943:325739:337899337899338201303Stenotrophomonas maltophilia K279a, complete genomeputative HTH family transcriptional regulator3e-1373.6
NC_011206:262844:265276265276265572297Acidithiobacillus ferrooxidans ATCC 53993, complete genomeputative transcriptional regulator1e-1271.6
NC_014228:2883500:288483428848342885118285Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-1271.6
NC_013892:1272448:127244812724481272732285Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-1270.5
NC_014246:1402500:143472214347221435015294Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative transcription regulator5e-1269.7
NC_008344:1899317:192287719228771923164288Nitrosomonas eutropha C91, complete genomeputative transcriptional regulator9e-1165.5
NC_010338:1216385:122227512222751223102828Caulobacter sp. K31, complete genomeputative transcriptional regulator2e-1064.7
NC_014644:1:216482164822004357Gardnerella vaginalis ATCC 14019 chromosome, complete genomeputative transcriptional regulator2e-1064.7
NC_004578:6089958:610795261079526108296345Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-0961.2
NC_011894:5787990:581674658167465816976231Methylobacterium nodulans ORS 2060, complete genome2e-0857.8
NC_014365:2888897:289710528971052897440336Desulfarculus baarsii DSM 2075 chromosome, complete genomeputative addiction module antidote protein4e-0857
NC_017265:1136000:113640111364011136721321Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative DNA-binding prophage protein5e-0856.6
NC_008150:650899:651813651813652127315Yersinia pestis Antiqua, complete genomeputative DNA-binding prophage protein5e-0856.6
NC_008149:3251196:326848332684833268797315Yersinia pestis Nepal516, complete genomeDNA-binding prophage protein5e-0856.6
NC_009381:2939782:295706829570682957382315Yersinia pestis Pestoides F chromosome, complete genomeDNA-binding prophage protein5e-0856.6
NC_014029:1283500:128427412842741284588315Yersinia pestis Z176003 chromosome, complete genomeDNA-binding prophage protein5e-0856.6
NC_017160:1507500:152493015249301525244315Yersinia pestis D182038 chromosome, complete genomeDNA-binding prophage protein5e-0856.6
NC_017168:4155143:415709341570934157407315Yersinia pestis A1122 chromosome, complete genomeputative DNA-binding prophage protein5e-0856.6
NC_004088:3382148:339943433994343399754321Yersinia pestis KIM, complete genomehypothetical protein5e-0856.6
NC_005810:1130251:114753811475381147858321Yersinia pestis biovar Microtus str. 91001, complete genomeputative DNA-binding prophage protein5e-0856.6
NC_003143:1233128:123507112350711235391321Yersinia pestis CO92, complete genomeputative DNA-binding prophage protein5e-0856.6
NC_005126:1223042:124160412416041241915312Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-0753.1
NC_008609:2840249:285128028512802851732453Pelobacter propionicus DSM 2379, complete genomeputative transcriptional regulator2e-0651.2
NC_012962:1827000:184627318462731846575303Photorhabdus asymbiotica, complete genomehypothetical protein4e-0650.1