Pre_GI: BLASTP Hits

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Query: NC_016582:3763476:3767362 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 3767362, End: 3768234, Length: 873

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:5850599:585989558598955860725831Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-86318
NC_015966:2841420:286091328609132861845933Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeYdjC family protein4e-31135
NC_015703:1087809:111255211125521113544993Runella slithyformis DSM 19594 chromosome, complete genomeYdjC family protein1e-25117
NC_009615:1734752:1750217175021717520761860Parabacteroides distasonis ATCC 8503 chromosome, complete genomebeta-lactamase class C 6-aminohexanoate-dimer hydrolase3e-1582.4
NC_014377:321949:339159339159339929771Thermosediminibacter oceani DSM 16646 chromosome, complete genomeYdjC family protein2e-1376.6
NC_015224:3587500:360751036075103608271762Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-1170.9
NC_008800:1090000:109450010945001095261762Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-1170.1
NC_011884:5019500:505461550546155055451837Cyanothece sp. PCC 7425, complete genomehopanoid biosynthesis associated protein HpnK2e-1169.7
NC_016641:373623:399873399873400643771Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein9e-1167.8
NC_020304:2237194:224586422458642246730867Desulfocapsa sulfexigens DSM 10523, complete genomehypothetical protein1e-1067.4
NC_014219:192555:192555192555193262708Bacillus selenitireducens MLS10 chromosome, complete genomeYdjC family protein7e-1064.7
NC_008150:2681327:269625126962512697012762Yersinia pestis Antiqua, complete genomehypothetical protein4e-0858.9
NC_010465:1273000:128602612860261286787762Yersinia pseudotuberculosis YPIII, complete genomeYdjC family protein4e-0858.9
NC_004088:1387276:140213414021341402895762Yersinia pestis KIM, complete genomehypothetical protein4e-0858.9
NC_005810:2739878:275479727547972755558762Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-0858.9
NC_008149:1317109:133203313320331332794762Yersinia pestis Nepal516, complete genomehypothetical protein4e-0858.9
NC_003143:2992295:300721930072193007980762Yersinia pestis CO92, complete genomehypothetical protein4e-0858.9
NC_006155:3456488:345988934598893460650762Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein4e-0858.9
NC_010634:3368000:337354733735473374308762Yersinia pseudotuberculosis PB1/+, complete genomeYdjC family protein4e-0858.9
NC_009381:1783886:178845917884591789220762Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-0858.9
NC_009708:1284555:129764712976471298408762Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-0858.9
NC_014029:3047506:306243030624303063191762Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-0858.9
NC_017154:2999841:300324230032423004003762Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-0858.9
NC_017160:2976683:298740529874052988166762Yersinia pestis D182038 chromosome, complete genomehypothetical protein4e-0858.9
NC_017168:2751027:275442827544282755189762Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-0858.9
NC_017265:3063016:306641730664173067178762Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Cellobiose phosphotransferase system YdjC-likeprotein4e-0858.9
NC_010159:3779129:379201837920183792779762Yersinia pestis Angola, complete genomeUPF0249 protein ChbG4e-0858.9
NC_014963:2972358:297945129794512980296846Terriglobus saanensis SP1PR4 chromosome, complete genomeYdjC family protein7e-0754.7