Pre_GI: BLASTP Hits

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Query: NC_015848:1708176:1729233 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1729233, End: 1729967, Length: 735

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019950:1689910:170981817098181710552735Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein4e-122437
NC_009565:1688642:170969517096951710426732Mycobacterium tuberculosis F11, complete genomehypothetical protein5e-119427
NC_002755:1684161:170521317052131705944732Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein5e-119427
NC_000962:1684005:170505817050581705789732Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein5e-119427
NC_009525:1685522:170657517065751707306732Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein5e-119427
NC_012943:2707677:270767727076772708408732Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein5e-119427
NC_016768:2704350:270435027043502705081732Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein5e-119427
NC_017026:1686500:170609317060931706824732Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein5e-119427
NC_015848:3343731:336528933652893366020732Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein1e-84312
NC_009565:3299937:332014133201413320872732Mycobacterium tuberculosis F11, complete genomehypothetical protein1e-84312
NC_000962:3288464:330866833086683309399732Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein1e-84312
NC_019950:3306419:332959833295983330329732Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein1e-84312
NC_009525:3300456:332066033206603321391732Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-84312
NC_002755:3282785:330298833029883303719732Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein1e-84312
NC_017026:3282405:330261333026133303344732Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-84312
NC_016804:3221818:324219432421943242925732Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein3e-84311
NC_012207:3237440:325565632556563256387732Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein3e-84311
NC_002945:3246278:326535632653563266087732Mycobacterium bovis AF2122/97, complete genomehypothetical protein3e-84311
NC_008769:3242453:326282932628293263560732Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein3e-84311
NC_016604:297687:314531314531315271741Mycobacterium rhodesiae NBB3 chromosome, complete genomeFkbM family methyltransferase4e-83307
NC_002944:1285436:129571912957191296441723Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein4e-83307
NC_016948:3381848:340316534031653403590426Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein5e-54210
NC_016947:3309898:333122333312233331606384Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein2e-48192
NC_015572:1252000:129141412914141292145732Methylomonas methanica MC09 chromosome, complete genomemethyltransferase FkbM family2e-43175
NC_007484:1671835:168403416840341684747714Nitrosococcus oceani ATCC 19707, complete genomeMethyltransferase FkbM1e-1893.6
NC_011901:2202690:222057222205722221300729Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completemethyltransferase FkbM4e-1891.7
NC_011901:2202690:223037822303782231085708Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein1e-1583.6
NC_010475:1161000:117416311741631174906744Synechococcus sp. PCC 7002, complete genomemethyltransferase, FkbM family protein4e-1582
NC_008146:1016446:103992010399201040783864Mycobacterium sp. MCS, complete genomeMethyltransferase FkbM4e-1478.6
NC_008705:1022252:104565410456541046427774Mycobacterium sp. KMS, complete genomemethyltransferase FkbM family4e-1478.2
NC_002977:1198438:121289712128971213658762Methylococcus capsulatus str. Bath, complete genomemethyltransferase, FkbM family1e-1273.2
NC_016629:1111619:113694311369431137827885Desulfovibrio africanus str. Walvis Bay chromosome, completeFkbM family methyltransferase3e-0755.5
NC_007508:2277640:228465422846542285406753Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein4e-0755.1
NC_017904:3415700:344746734474673447961495Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein5e-0754.7
NC_007761:781210:806935806935807684750Rhizobium etli CFN 42, complete genomelipopolysaccharide biosynthesis protein (SAM-dependent methyltransferase protein)1e-0653.9
NC_011832:366092:374900374900375670771Candidatus Methanosphaerula palustris E1-9c, complete genomemethyltransferase FkbM family9e-0753.9
NC_017271:2278500:228450422845042285256753Xanthomonas campestris pv. raphani 756C chromosome, completemethyltransferase, FkbM family protein9e-0753.9
NC_000914:135534:151051151051151782732Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceNoeI1e-0653.5
NC_011666:3001513:3004912300491230059971086Methylocella silvestris BL2, complete genomemethyltransferase FkbM family2e-0653.1
NC_009937:3324793:333558033355803336365786Azorhizobium caulinodans ORS 571, complete genomemethyltransferase7e-0651.2
NC_020541:625925:632216632216632980765Rhodanobacter sp. 2APBS1, complete genomemethyltransferase, FkbM family7e-0650.8