Pre_GI: BLASTP Hits

Some Help

Query: NC_014323:245979:251082 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 251082, End: 252635, Length: 1554

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014323:245979:2534372534372549931557Herbaspirillum seropedicae SmR1 chromosome, complete genomeTPR repeat containing, SEL1 subfamily0777
NC_008060:1544920:1551205155120515527671563Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceSel1-like repeat1e-124447
NC_008544:615448:6312316312316327931563Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceSel1 domain protein repeat-containing protein1e-124447
NC_010557:1030319:1036216103621610377541539Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceSel1 domain protein repeat-containing protein1e-117424
NC_010551:1462827:1472844147284414744901647Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceSel1 domain protein repeat-containing protein3e-78292
NC_007511:3371319:3379749337974933813891641Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein2e-77290
NC_012791:4079062:4091771409177140930901320Variovorax paradoxus S110 chromosome 1, complete genomeSel1 domain protein repeat-containing protein3e-64246
NC_012791:4079062:4088851408885140902061356Variovorax paradoxus S110 chromosome 1, complete genomeSel1 domain protein repeat-containing protein9e-61234
NC_012791:4079062:4090342409034240916491308Variovorax paradoxus S110 chromosome 1, complete genomeSel1 domain protein repeat-containing protein1e-56221
NC_015856:29338:3373133731347951065Collimonas fungivorans Ter331 chromosome, complete genomeSel1-like repeat protein1e-52207
NC_007952:495000:5037935037935050641272Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative lipoprotein3e-51203
NC_007952:495000:5067605067605080311272Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative lipoprotein6e-51202
NC_007952:495000:5052135052135066101398Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein2e-48194
NC_007952:495000:5021535021535035171365Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative lipoprotein2e-44180
NC_016590:1183470:1191203119120311924951293Burkholderia sp. YI23 chromosome 3, complete sequenceputative lipoprotein2e-1687.8
NC_005773:106000:1331081331081341301023Pseudomonas syringae pv. phaseolicola 1448A, complete genomelipoprotein, putative6e-1582.8
NC_015376:1752883:1763779176377917650231245Burkholderia gladioli BSR3 chromosome chromosome 2, completeSel1 domain protein repeat-containing protein1e-1378.2
NC_007005:5882205:589505058950505896006957Pseudomonas syringae pv. syringae B728a, complete genomeSel1-like repeat2e-1377.8
NC_011001:163813:1764521764521777621311Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative lipoprotein2e-1377.4
NC_016626:400080:4200434200434213201278Burkholderia sp. YI23 plasmid byi_1p, complete sequenceSel1 domain-containing protein repeat-containing protein4e-1376.6
NC_016590:1183470:1193848119384811950681221Burkholderia sp. YI23 chromosome 3, complete sequenceSel1 domain-containing protein repeat-containing protein1e-1275.5
NC_010552:1212000:1223941122394112251791239Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceSel1 domain protein repeat-containing protein2e-1274.7
NC_005085:1269787:1300303130030313015861284Chromobacterium violaceum ATCC 12472, complete genomeprobable lipoprotein4e-1273.2
NC_016626:400080:4175514175514188281278Burkholderia sp. YI23 plasmid byi_1p, complete sequenceSel1-like repeat protein3e-1170.5
NC_011001:163813:1745311745311758381308Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative lipoprotein4e-1170.1
NC_010830:475248:5044185044185074263009Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-1068.2
NC_012913:280506:2875702875702887271158Aggregatibacter aphrophilus NJ8700, complete genomeSel1 domain protein repeat-containing protein3e-1067
NC_010830:1069666:1078070107807010809552886Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein6e-1066.2
NC_010830:384812:3939843939844012257242Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein9e-1065.5
NC_010830:1069666:1084709108470910867632055Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein9e-1065.5
NC_013355:1332263:1332263133226313340621800Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeSel1 domain protein repeat-containing protein8e-0962.4
NC_010830:1543548:1556591155659115582491659Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-0860.8
NC_013440:1436784:1444937144493714464001464Haliangium ochraceum DSM 14365, complete genomeSel1 domain protein repeat-containing protein2e-0860.8
NC_010830:1543548:1551922155192215561304209Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-0860.5
NC_004757:267165:2743522743522774503099Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein4e-0860.1
NC_010830:1069666:1080998108099810833672370Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein4e-0860.1
NC_007005:5882205:5896106589610658971371032Pseudomonas syringae pv. syringae B728a, complete genomeSel1-like repeat5e-0859.7
NC_016048:1625812:1638521163852116414302910Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-0758.5
NC_015731:313676:315414315414316016603Nitrosomonas sp. Is79A3 chromosome, complete genomeSel1 domain-containing protein2e-0757.8
NC_014394:1594071:1605189160518916064091221Gallionella capsiferriformans ES-2 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein2e-0757.8
NC_015581:1731120:1737854173785417389481095Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein4e-0756.6
NC_009255:1250939:1289405128940512906191215Burkholderia vietnamiensis G4 chromosome 2, complete sequenceSel1 domain-containing protein4e-0756.6
NC_013959:1195249:120238612023861203339954Sideroxydans lithotrophicus ES-1 chromosome, complete genomeSel1 domain protein repeat-containing protein4e-0756.6
NC_007614:109000:1097271097271111961470Nitrosospira multiformis ATCC 25196 chromosome 1, completeSel1-like repeat6e-0756.2
NC_000921:1147394:116131911613191162089771Helicobacter pylori J99, complete genomehypothetical protein6e-0756.2
NC_010830:1124500:1137798113779811422794482Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein6e-0756.2
NC_015572:2186394:2191242219124221929961755Methylomonas methanica MC09 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein7e-0755.8
NC_004431:1211000:1219723121972312208591137Escherichia coli CFT073, complete genomehypothetical protein1e-0655.5
NC_015275:2712991:2728346272834627293981053Clostridium lentocellum DSM 5427 chromosome, complete genomeSel1 domain protein repeat-containing protein1e-0655.5
NC_004663:4373902:4380147438014743812921146Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein1e-0655.1
NC_010830:475248:507427507427508383957Candidatus Amoebophilus asiaticus 5a2, complete genome1e-0655.1
NC_008347:3034100:3047264304726430485111248Maricaulis maris MCS10, complete genomeSel1 domain protein repeat-containing protein2e-0654.7
NC_007946:1119000:1127725112772511288611137Escherichia coli UTI89, complete genomehypothetical protein1e-0654.7
NC_018000:2964500:2979167297916729813082142Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein1e-0654.7
NC_010830:1637598:1645106164510616473012196Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-0654.3
NC_010830:1171781:1177610117761011814553846Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-0653.9
NC_010465:2428620:2443628244362824457902163Yersinia pseudotuberculosis YPIII, complete genomeSel1 domain protein repeat-containing protein4e-0653.5
NC_008150:1543635:1543635154363515457972163Yersinia pestis Antiqua, complete genomehypothetical protein4e-0653.1
NC_003143:2258636:2258636225863622607982163Yersinia pestis CO92, complete genomehypothetical protein4e-0653.1
NC_008149:1669921:1669921166992116720832163Yersinia pestis Nepal516, complete genomehypothetical protein4e-0653.1
NC_020908:2571943:2587957258795725891591203Octadecabacter arcticus 238, complete genomeputative Sel1-like protein4e-0653.1
NC_006138:225832:2412732412732423401068Desulfotalea psychrophila LSv54, complete genomesimilar to TPR repeat proteins5e-0653.1
NC_004088:2541033:2556053255605325582152163Yersinia pestis KIM, complete genomehypothetical protein4e-0653.1
NC_014029:2335021:2350041235004123522032163Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-0653.1
NC_017154:2258228:2258228225822822603902163Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-0653.1
NC_017265:2263347:2277011227701122791732163Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-0653.1
NC_005810:2043730:2043730204373020458922163Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-0653.1
NC_008347:3034100:3048523304852330497341212Maricaulis maris MCS10, complete genomeSel1 domain protein repeat-containing protein4e-0653.1
NC_009381:1258396:1272647127264712748092163Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-0653.1
NC_009708:2392640:2407661240766124098232163Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-0653.1
NC_014972:2089003:210678821067882107624837Desulfobulbus propionicus DSM 2032 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein7e-0652.8
NC_006155:2334122:2334122233412223362842163Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein6e-0652.8
NC_010634:2252329:2252329225232922544912163Yersinia pseudotuberculosis PB1/+, complete genomeSel1 domain-containing protein6e-0652.8
NC_009445:7324977:7339392733939273413441953Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein8e-0652.4
NC_020908:1472981:148604014860401486744705Octadecabacter arcticus 238, complete genomesel-1-like repeats-containing protein8e-0652.4
NC_014394:1989418:199750619975061998492987Gallionella capsiferriformans ES-2 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein8e-0652.4