Pre_GI: BLASTP Hits

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Query: NC_013714:2086526:2137627 Bifidobacterium dentium Bd1, complete genome

Start: 2137627, End: 2138928, Length: 1302

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:2292040:2296205229620522975601356Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein8e-130464
NC_011593:2288993:2296387229638722977421356Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,HipA domain-containing protein8e-130464
NC_014550:3534000:3534949353494935362351287Arthrobacter arilaitensis Re117, complete genomeHipA-like protein4e-73275
NC_014830:1602198:1611681161168116129581278Intrasporangium calvum DSM 43043 chromosome, complete genomeHipA N-terminal domain protein9e-57221
NC_013172:3093467:3093467309346730947021236Brachybacterium faecium DSM 4810, complete genomeHipA domain-containing protein2e-56220
NC_012811:227541:2275412275412288871347Methylobacterium extorquens AM1 megaplasmid, complete sequenceHipA-like protein3e-52206
NC_015563:4583906:4597729459772945990361308Delftia sp. Cs1-4 chromosome, complete genomeHipA N-terminal domain-containing protein3e-47189
NC_015567:547500:5554965554965567941299Serratia sp. AS9 chromosome, complete genomeHipA N-terminal domain-containing protein8e-45181
NC_015566:547387:5553105553105566081299Serratia sp. AS12 chromosome, complete genomeHipA N-terminal domain-containing protein8e-45181
NC_014973:4174668:4178934417893441802501317Geobacter sp. M18 chromosome, complete genomeHipA N-terminal domain-containing protein2e-43176
NC_015138:5046921:5051982505198250533041323Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeHipA N-terminal domain-containing protein2e-41170
NC_010677:1296000:1308129130812913094871359Francisella tularensis subsp. mediasiatica FSC147, complete genometranscription regulator2e-41170
NC_020181:3328844:3334219333421933357331515Enterobacter aerogenes EA1509E, complete genomeHipA protein3e-41169
NC_007954:334795:3419373419373432441308Shewanella denitrificans OS217, complete genomeHipA-like protein6e-41168
NC_011149:4677412:4692627469262746939551329Salmonella enterica subsp. enterica serovar Agona str. SL483,protein HipA6e-41168
NC_007953:1434705:1439954143995414412881335Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein7e-40165
NC_014965:997344:1023026102302610243541329Vibrio vulnificus MO6-24/O chromosome I, complete sequenceHipA protein5e-39162
NC_014246:876000:8813418813418828461506Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative transcriptional regulator2e-38160
NC_009838:81913:8633986339876641326Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceputative capsule biosynthesis protein4e-38159
NC_004459:2025436:2039667203966720409951329Vibrio vulnificus CMCP6 chromosome I, complete sequenceHipA-like protein4e-38159
NC_011742:1574036:1591112159111215924341323Escherichia coli S88 chromosome, complete genomeregulator with hipB3e-37156
NC_021066:1393750:1414359141435914156901332Raoultella ornithinolytica B6, complete genomepersistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator2e-36154
NC_011741:1579375:1601102160110216024241323Escherichia coli IAI1 chromosome, complete genomeregulator with hipB2e-36153
CP002185:1681327:1703053170305317043751323Escherichia coli W, complete genomeregulator with HipB2e-36153
CP002516:2395578:2401473240147324027951323Escherichia coli KO11, complete genomeHipA N-terminal domain protein2e-36153
NC_016902:2395578:2401473240147324027951323Escherichia coli KO11FL chromosome, complete genomeHipA N-terminal domain-containing protein2e-36153
NC_007384:1696831:1696831169683116981521322Shigella sonnei Ss046, complete genome2e-36153
CU928160:1579375:1601102160110216024241323Escherichia coli IAI1 chromosome, complete genomeregulator with hipB2e-36153
NC_020304:752012:7586387586387598941257Desulfocapsa sulfexigens DSM 10523, complete genomeHipA domain-containing protein4e-36152
NC_010468:2345781:2351690235169023530121323Escherichia coli ATCC 8739, complete genomeHipA N-terminal domain protein4e-36152
NC_010473:1661000:1678503167850316798251323Escherichia coli str. K-12 substr. DH10B, complete genomeregulator with hipB4e-36152
AC_000091:1574000:1592568159256815938901323Escherichia coli W3110 DNA, complete genomeregulator with hipB4e-36152
NC_000913:1570431:1588878158887815902001323Escherichia coli K12, complete genomeregulator with hipB4e-36152
NC_009800:1589000:1607677160767716089991323Escherichia coli HS, complete genomeprotein HipA4e-36152
NC_012759:1462490:1480937148093714822591323Escherichia coli BW2952 chromosome, complete genomeregulator with hipB4e-36152
NC_012947:2228235:2232110223211022334321323Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeHipA N-terminal domain protein4e-36152
NC_012967:1546000:1567421156742115687431323Escherichia coli B str. REL606 chromosome, complete genomeregulator with hipB4e-36152
NC_020063:2230000:2255666225566622569791314Enterobacteriaceae bacterium strain FGI 57, complete genomeHipA domain-containing protein3e-36152
CP002797:1591000:1604080160408016053811302Escherichia coli NA114, complete genomeHipA protein9e-36151
NC_017075:1:1110611106124491344Rubrivivax gelatinosus IL144, complete genomeHipA N-terminal domain-containing protein1e-35150
NC_018000:2964500:2964960296496029662281269Sinorhizobium fredii USDA 257 chromosome, complete genomekinase Y4mE1e-34147
NC_012918:356019:3612303612303624741245Geobacter sp. M21 chromosome, complete genomeHipA N-terminal domain-containing protein4e-32139
NC_011916:467106:4975844975844988551272Caulobacter crescentus NA1000 chromosome, complete genomeprotein hipA3e-31136
NC_015633:2565753:2582282258228225836011320Vibrio anguillarum 775 chromosome chromosome I, complete sequenceHipA1e-30134
NC_012668:2258854:2281544228154422828631320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein1e-30134
NC_012668:1623350:1644773164477316460921320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein1e-30134
NC_012668:160357:1663781663781676971320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein1e-30134
NC_008278:256427:2701312701312714291299Frankia alni ACN14a, complete genomeputative HipA protein.5e-27122
NC_002696:2941644:2951498295149829528321335Caulobacter crescentus CB15, complete genomehypothetical protein2e-25117
NC_011916:2967624:2977478297747829788121335Caulobacter crescentus NA1000 chromosome, complete genomehipA-like phosphatidylinositol 3/4-kinase2e-25117
NC_008322:641197:6499886499886512591272Shewanella sp. MR-7, complete genomeHipA domain protein5e-25115
NC_004347:718091:7233087233087246091302Shewanella oneidensis MR-1, complete genomehypothetical protein4e-24112
NC_002655:1966464:1972050197205019730721023Escherichia coli O157:H7 EDL933, complete genomepersistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator5e-23108
NC_015850:736680:7505247505247517771254Acidithiobacillus caldus SM-1 chromosome, complete genomeprotein HipA9e-22105
NC_009663:1656804:1660691166069116619771287Sulfurovum sp. NBC37-1, complete genomehypothetical protein9e-21101
NC_011750:1849561:186943618694361870125690Escherichia coli IAI39 chromosome, complete genome1e-20100
NC_009092:521519:5361395361395374401302Shewanella loihica PV-4, complete genomeHipA domain protein1e-1998.2
NC_014323:4665610:4695226469522646965451320Herbaspirillum seropedicae SmR1 chromosome, complete genomeHipA domain-containing protein4e-1789.4
NC_012792:627500:6376566376566390261371Variovorax paradoxus S110 chromosome 2, complete genomeHipA N-terminal domain protein5e-1582.4
NC_015635:3542125:3555796355579635569981203Microlunatus phosphovorus NM-1, complete genomehypothetical protein1e-1378.2
NC_014355:1461355:1478780147878014799851206Candidatus Nitrospira defluvii, complete genomeputative serine kinase HipA5e-1376.3
NC_009648:5119271:513174551317455132260516Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-1274.3
NC_010815:40357:4453344533457441212Geobacter lovleyi SZ plasmid pGLOV01, complete sequenceHipA N-terminal domain protein3e-1273.6
NC_014151:3797861:3803799380379938050371239Cellulomonas flavigena DSM 20109 chromosome, complete genomeHipA N-terminal domain protein2e-1170.5
NC_009665:2219082:2232566223256622338281263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein1e-1068.2
NC_009832:622969:630242630242630592351Serratia proteamaculans 568, complete genomehypothetical protein5e-1066.2
NC_012586:897148:8971488971488984041257Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceHipA-like protein5e-1066.2
NC_009997:3988980:3999559399955940008211263Shewanella baltica OS195, complete genomeHipA N-terminal domain protein6e-1065.9
NC_016901:3936944:3947523394752339487851263Shewanella baltica OS678 chromosome, complete genomeHipA N-terminal domain-containing protein6e-1065.9
NC_009997:4091371:4100950410095041022121263Shewanella baltica OS195, complete genomeHipA N-terminal domain protein6e-1065.9
NC_016901:4039335:4048914404891440501761263Shewanella baltica OS678 chromosome, complete genomeHipA N-terminal domain-containing protein6e-1065.9
NC_009665:3869904:3884666388466638859281263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein8e-1065.5
NC_009665:3984080:3994654399465439959161263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein2e-0964.3
NC_014006:2932959:2937186293718629390391854Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein1e-0861.2
NC_009439:4404942:4411796441179644131301335Pseudomonas mendocina ymp, complete genomeHipA domain-containing protein5e-0859.3
NC_017515:1744500:1807574180757418088271254Neisseria meningitidis M04-240196 chromosome, complete genomehipA family protein8e-0858.5
NC_017516:1755500:1810100181010018113531254Neisseria meningitidis H44/76 chromosome, complete genomehipA family protein1e-0758.5
NC_003112:1824196:1839835183983518410881254Neisseria meningitidis MC58, complete genomehypothetical protein1e-0758.5
NC_017518:1843705:1859343185934318605961254Neisseria meningitidis NZ-05/33 chromosome, complete genomehipA family protein3e-0756.6
NC_017514:446616:4906874906874919761290Neisseria meningitidis M01-240149 chromosome, complete genomehipA family protein4e-0756.6
NC_017517:1807072:1820414182041418217031290Neisseria meningitidis M01-240355 chromosome, complete genomehipA family protein4e-0756.6
NC_014216:3003347:3003347300334730045641218Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeHipA N-terminal domain protein4e-0756.2
NC_017505:1783476:1802221180222118035101290Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein5e-0755.8
NC_008253:1534840:155134915513491552221873Escherichia coli 536, complete genomehypothetical protein HipA7e-0755.5