Pre_GI: BLASTP Hits

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Query: NC_013198:298000:315088 Lactobacillus rhamnosus GG, complete genome

Start: 315088, End: 316281, Length: 1194

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:282901:2971212971212983141194Lactobacillus rhamnosus Lc 705, complete genomehigh affinity branched-chain amino acid ABC transporter, amino acid-binding protein, periplasmic component0757
NC_008526:250000:2668772668772680701194Lactobacillus casei ATCC 334, complete genomeABC-type branched-chain amino acid transport system, periplasmic component0670
NC_010999:252605:2661492661492673421194Lactobacillus casei, complete genomeBranched-chain amino acid ABC transporter, substrate binding protein0670
NC_014334:267409:2837182837182849111194Lactobacillus casei str. Zhang chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein0670
NC_013740:15401:1741117411185891179Acidaminococcus fermentans DSM 20731, complete genomeExtracellular ligand-binding receptor2e-72273
NC_009437:2579161:2601627260162726028081182Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular ligand-binding receptor1e-65250
NC_010337:98974:1023691023691035711203Heliobacterium modesticaldum Ice1, complete genomebranched chain amino acid abc transporter, amino acid-binding protein4e-65248
NC_014831:786011:7933307933307945381209Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family4e-65248
NC_007503:2010858:2024141202414120253251185Carboxydothermus hydrogenoformans Z-2901, complete genomehigh affinity branched-chain amino acid ABC transporter, amino acid-binding protein2e-61236
NC_015711:3085038:3107479310747931086571179Myxococcus fulvus HW-1 chromosome, complete genomeputative branched chain amino acid ABC transporter periplasmic amino acid-binding protein4e-55215
NC_009617:3184924:3218440321844032196211182Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeextracellular ligand-binding receptor4e-55215
NC_003454:2080705:2100519210051921016701152Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeLeucine-, isoleucine-, valine-, threonine-, and alanine-binding protein2e-52206
NC_011297:787932:7916897916897928191131Dictyoglomus thermophilum H-6-12, complete genomebranched chain amino acid ABC transporter6e-51201
NC_015275:566000:5665635665635677501188Clostridium lentocellum DSM 5427 chromosome, complete genomeExtracellular ligand-binding receptor7e-50198
NC_020291:6426704:6442797644279764439511155Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family1e-49197
NC_011661:961129:9625519625519636811131Dictyoglomus turgidum DSM 6724, complete genomeExtracellular ligand-binding receptor3e-49196
NC_014614:2295131:2313207231320723143821176Clostridium sticklandii, complete genomeExtracellular ligand-binding receptor precursor1e-41171
NC_015318:1583839:1594624159462415957661143Hippea maritima DSM 10411 chromosome, complete genomeExtracellular ligand-binding receptor1e-39164
NC_015578:61820:8915689156903461191Treponema primitia ZAS-2 chromosome, complete genomeextracellular ligand-binding receptor1e-38161
NC_011146:2200142:2235574223557422367671194Geobacter bemidjiensis Bem, complete genomeExtracellular ligand-binding receptor1e-38160
NC_014972:2659388:2679672267967226808441173Desulfobulbus propionicus DSM 2032 chromosome, complete genomeHAAT family amino acid/amide ABC transporter substrate-binding protein6e-35148
NC_012796:1645856:1667488166748816686631176Desulfovibrio magneticus RS-1, complete genomeputative ABC transporter substrate binding protein7e-35148
NC_009633:2137999:2158402215840221596101209Alkaliphilus metalliredigens QYMF chromosome, complete genomeextracellular ligand-binding receptor4e-34145
NC_008702:4064470:4084668408466840857921125Azoarcus sp. BH72, complete genomeprobable leucine-specific binding protein7e-31135
NC_008702:4064470:4086174408617440872891116Azoarcus sp. BH72, complete genomeprobable leucine-specific binding protein2e-30134
NC_011060:2099255:2114243211424321153641122Pelodictyon phaeoclathratiforme BU-1, complete genomeExtracellular ligand-binding receptor3e-30132
NC_009483:2489000:2489003248900324901421140Geobacter uraniireducens Rf4 chromosome, complete genomeextracellular ligand-binding receptor1e-29130
NC_016002:2652500:2665852266585226670001149Pseudogulbenkiania sp. NH8B, complete genomeextracellular ligand-binding receptor2e-29130
NC_015387:2072237:2073114207311420742381125Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeExtracellular ligand-binding receptor3e-29129
NC_015499:119200:1428541428541439931140Thermodesulfobium narugense DSM 14796 chromosome, complete genomeExtracellular ligand-binding receptor7e-29128
NC_007511:719493:7310787310787322771200Burkholderia sp. 383 chromosome 2, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein2e-28127
NC_010515:2358134:2372033237203323731511119Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-28127
NC_008543:2035292:2037685203768520388031119Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-28127
NC_008061:428501:4408634408634419811119Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-28127
NC_010552:2089140:2092992209299220941101119Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-28127
NC_011001:2517159:2520322252032225214401119Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative amino acid ABC transporter solute binding protein4e-28125
NC_012658:545840:5468995468995480411143Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein4e-28125
NC_007948:360199:3681863681863693161131Polaromonas sp. JS666, complete genomeExtracellular ligand-binding receptor8e-28125
NC_009255:1105786:1143156114315611443041149Burkholderia vietnamiensis G4 chromosome 2, complete sequenceextracellular ligand-binding receptor1e-27124
NC_010086:1816378:1879383187938318805311149Burkholderia multivorans ATCC 17616 chromosome 2, completeExtracellular ligand-binding receptor1e-27124
NC_010805:575709:5947735947735959211149Burkholderia multivorans ATCC 17616 chromosome 2, completebranched-chain amino acid transport system substrate-binding protein1e-27124
NC_011979:3045952:3066827306682730679661140Geobacter sp. FRC-32, complete genomeExtracellular ligand-binding receptor9e-27121
NC_008543:323773:3252703252703264301161Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceExtracellular ligand-binding receptor1e-26120
NC_007946:3855445:3859797385979738609571161Escherichia coli UTI89, complete genomeLeu/Ile/Val-binding protein precursor1e-26120
NC_008563:3888232:3892584389258438937441161Escherichia coli APEC O1, complete genomeLeu/Ile/Val-binding protein precursor1e-26120
NC_011742:3799788:3807332380733238084351104Escherichia coli S88 chromosome, complete genomeleucine/isoleucine/valine transporter subunit ; periplasmic-binding component of ABC superfamily2e-26120
NC_011979:3045952:3068002306800230691411140Geobacter sp. FRC-32, complete genomeExtracellular ligand-binding receptor2e-26120
NC_014323:3976351:3980128398012839812701143Herbaspirillum seropedicae SmR1 chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein3e-26119
NC_007946:3855445:3857693385769338588561164Escherichia coli UTI89, complete genomeleucine-specific binding protein precursor8e-26118
NC_010552:335989:3383023383023394531152Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceExtracellular ligand-binding receptor8e-26118
NC_011666:2259447:2259447225944722605651119Methylocella silvestris BL2, complete genomeExtracellular ligand-binding receptor8e-26118
NC_015556:819503:8310258310258321461122Pseudomonas fulva 12-X chromosome, complete genomeExtracellular ligand-binding receptor1e-25117
NC_011742:3799788:3805228380522838063371110Escherichia coli S88 chromosome, complete genomeleucine ABC transporter subunit substrate-binding protein1e-25117
NC_008563:3888232:3890480389048038915891110Escherichia coli APEC O1, complete genomeleucine transporter subunit1e-25117
NC_015224:279037:2812912812912825471257Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,branched-chain amino acid-binding protein1e-25117
NC_003155:7453994:7476683747668374779121230Streptomyces avermitilis MA-4680, complete genomeperiplasmic branched-chain amino acid-binding protein2e-25117
NC_013939:913890:9285399285399296781140Deferribacter desulfuricans SSM1, complete genomebranched-chain amino acid ABC transporter substrate-binding protein2e-25117
NC_012791:2233098:2243498224349822446401143Variovorax paradoxus S110 chromosome 1, complete genomeExtracellular ligand-binding receptor8e-25115
NC_009436:2685910:2687061268706126881821122Enterobacter sp. 638, complete genomeextracellular ligand-binding receptor5e-25115
NC_021177:1736854:1746033174603317472711239Streptomyces fulvissimus DSM 40593, complete genomeBranched chain amino acid binding protein1e-24114
NC_016582:9422650:9443561944356194447781218Streptomyces bingchenggensis BCW-1 chromosome, complete genomebranched-chain amino acid transport system substrate-binding protein2e-24114
NC_021066:1393750:1411247141124714123621116Raoultella ornithinolytica B6, complete genomeextracellular ligand-binding receptor3e-24113
NC_010557:679656:6890646890646901731110Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceExtracellular ligand-binding receptor3e-24112
NC_010681:74587:7995179951811291179Burkholderia phytofirmans PsJN chromosome 1, complete sequenceExtracellular ligand-binding receptor6e-24112
NC_003296:1980687:1996311199631119974531143Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE LEUCINE-SPECIFIC BINDING PRECURSOR TRANSMEMBRANE PROTEIN7e-24112
NC_015138:2025000:2036773203677320379121140Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeextracellular ligand-binding receptor1e-23111
NC_012796:1645856:1668660166866016697691110Desulfovibrio magneticus RS-1, complete genomeputative ABC transporter substrate binding protein precursor4e-23109
NC_008786:4216152:4233994423399442352261233Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor4e-23109
NC_013510:3324978:3334303333430333354451143Thermomonospora curvata DSM 43183, complete genomeExtracellular ligand-binding receptor7e-23108
NC_016625:171341:2005792005792017031125Burkholderia sp. YI23 chromosome 2, complete sequenceextracellular ligand-binding receptor4e-22106
NC_013216:956461:9566369566369577781143Desulfotomaculum acetoxidans DSM 771, complete genomeExtracellular ligand-binding receptor2e-21103
NC_016745:675909:6971166971166982011086Oceanimonas sp. GK1 chromosome, complete genomeleucine ABC transporter subunit substrate-binding protein LivK2e-21103
NC_008825:2063990:2076133207613320772601128Methylibium petroleiphilum PM1, complete genomeputative secreted substrate binding protein2e-21103
NC_010337:1051425:1069243106924310704091167Heliobacterium modesticaldum Ice1, complete genomebranched-chain amino acid abc transporter, substrate binding protein3e-21103
NC_005773:694990:6977246977246988601137Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein6e-21102
NC_008705:3201817:3209104320910432103151212Mycobacterium sp. KMS, complete genomeExtracellular ligand-binding receptor4e-21102
NC_009953:188000:1903781903781915291152Salinispora arenicola CNS-205 chromosome, complete genomeextracellular ligand-binding receptor3e-2099.8
NC_016114:5539021:5563215556321555644501236Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeABC transporter substrate-binding protein9e-2098.2
NC_018691:896464:8964648964648976121149Alcanivorax dieselolei B5 chromosome, complete genomeABC-type branched-chain amino acid transport system, periplasmic component1e-1997.8
NC_010676:2658495:2672337267233726734791143Burkholderia phytofirmans PsJN chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-1997.1
NC_010424:697187:7002417002417014191179Candidatus Desulforudis audaxviator MP104C, complete genomeExtracellular ligand-binding receptor5e-1995.9
NC_010511:5169338:5171493517149351725931101Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor1e-1894.7
NC_016906:3006748:3011458301145830126871230Gordonia polyisoprenivorans VH2 chromosome, complete genomeleucine-, isoleucine-, valine-, threonine-, and alanine-binding protein BraC2e-1894
NC_010681:1234500:1249047124904712502101164Burkholderia phytofirmans PsJN chromosome 1, complete sequenceExtracellular ligand-binding receptor4e-1892.8
NC_016147:2820232:2829724282972428308841161Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeextracellular ligand-binding receptor1e-1791.3
NC_008751:2774000:2794966279496627960841119Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeExtracellular ligand-binding receptor4e-1789.4
NC_002937:614000:6169966169966181141119Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein4e-1789.4
NC_012587:3613162:3635526363552636367191194Rhizobium sp. NGR234, complete genomeputative extracellular ligand-binding receptor5e-1789
NC_013524:392089:4045654045654058811317Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeExtracellular ligand-binding receptor6e-1789
NC_011060:459615:4689294689294701521224Pelodictyon phaeoclathratiforme BU-1, complete genomeExtracellular ligand-binding receptor8e-1788.6
NC_013895:1282566:1295398129539812965551158Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completereceptor family ligand-binding protein7e-1685.5
NC_015953:1581542:1592724159272415939501227Streptomyces sp. SirexAA-E chromosome, complete genomeExtracellular ligand-binding receptor2e-1584
NC_007963:1582089:1604636160463616058501215Chromohalobacter salexigens DSM 3043, complete genomeExtracellular ligand-binding receptor7e-1582
NC_010572:6463939:6489250648925064904431194Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative branched-chain amino acid ABC transporter substrate-binding protein8e-1581.6
NC_014837:1144500:1169762116976211709401179Pantoea sp. At-9b chromosome, complete genomeextracellular ligand-binding receptor1e-1480.9
NC_018000:1914945:1951030195103019522381209Sinorhizobium fredii USDA 257 chromosome, complete genomeextracellular ligand-binding receptor3e-1479.7
NC_020409:437781:4564724564724576051134Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeExtracellular ligand-binding receptor6e-1479
NC_014532:110875:1316501316501328851236Halomonas elongata DSM 2581, complete genomeABC-type transport system periplasmic substrate-binding protein8e-1478.6
NC_008786:2175064:2201499220149922027551257Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor1e-1378.2
NC_008278:5012000:5014820501482050165261707Frankia alni ACN14a, complete genomePutative branched-chain amino acid ABC transporter, perisplasmic amino acid-binding protein2e-1274.3
NC_008278:5012000:5013384501338450145561173Frankia alni ACN14a, complete genomeputative branched chain amino acid binding protein precursor.4e-1272.8
NC_018000:1914945:1940879194087919420781200Sinorhizobium fredii USDA 257 chromosome, complete genomeextracellular ligand-binding receptor4e-1272.8
NC_016633:1898234:1899184189918419003501167Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein1e-1171.2
NC_010511:6169468:6190516619051661917511236Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor5e-1169.3
NC_008554:4839116:4848442484844248494611020Syntrophobacter fumaroxidans MPOB, complete genomeExtracellular ligand-binding receptor6e-1168.9
NC_014828:2497462:2506564250656425077631200Ethanoligenens harbinense YUAN-3 chromosome, complete genomeExtracellular ligand-binding receptor2e-1067.4
NC_016147:2820232:2831471283147128326521182Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeextracellular ligand-binding receptor2e-1067
NC_008699:2294361:2297087229708722982591173Nocardioides sp. JS614, complete genomeExtracellular ligand-binding receptor2e-1067
NC_010505:4676403:4699711469971147008651155Methylobacterium radiotolerans JCM 2831, complete genomeExtracellular ligand-binding receptor4e-1065.9
NC_010172:3712000:3729755372975537309481194Methylobacterium extorquens PA1, complete genomeExtracellular ligand-binding receptor9e-1065.1
NC_010725:3992948:4013070401307040142631194Methylobacterium populi BJ001, complete genomeExtracellular ligand-binding receptor1e-0964.7
NC_002939:2617037:2619301261930126204491149Geobacter sulfurreducens PCA, complete genomeABC transporter, periplasmic substrate-binding protein, putative2e-0963.9
NC_018581:3202281:3206627320662732079911365Gordonia sp. KTR9 chromosome, complete genomeABC-type branched-chain amino acid transport systems, periplasmic component3e-0963.5
NC_020210:2044944:2053712205371220549561245Geobacillus sp. GHH01, complete genomeputative leucine ABC transporter substrate-binding protein3e-0963.2
NC_015458:3077804:3097937309793730991391203Pusillimonas sp. T7-7 chromosome, complete genomeextracellular ligand-binding receptor8e-0962
NC_015656:2484749:2511587251158725132181632Frankia symbiont of Datisca glomerata chromosome, complete genomeExtracellular ligand-binding receptor1e-0861.6
NC_011768:79297:9265092650938341185Desulfatibacillum alkenivorans AK-01, complete genomeExtracellular ligand-binding receptor4e-0859.7
NC_012108:3824977:3831173383117338323301158Desulfobacterium autotrophicum HRM2, complete genomeABC-typ branched-chain amino acid transport system, periplasmic substrate binding component5e-0859.3
NC_014830:3438504:3479347347934734805311185Intrasporangium calvum DSM 43043 chromosome, complete genomeExtracellular ligand-binding receptor5e-0859.3
NC_008786:5128363:5138340513834051394941155Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor1e-0758.2
NC_004113:1137754:1151497115149711528101314Thermosynechococcus elongatus BP-1, complete genomeABC transporter substrate-binding protein5e-0755.8
NC_014831:2133060:2141827214182721430561230Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family6e-0755.8
NC_014391:4644500:4645341464534146466811341Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeextracellular ligand-binding receptor8e-0755.5
NC_016147:3023180:3043998304399830451161119Pseudoxanthomonas spadix BD-a59 chromosome, complete genometwin-arginine translocation pathway signal7e-0755.5
NC_009921:8549757:8572164857216485734231260Frankia sp. EAN1pec, complete genomeconserved hypothetical protein8e-0755.1
NC_019964:1873167:1899797189979719010381242Halovivax ruber XH-70, complete genomeABC-type branched-chain amino acid transport system, periplasmic component9e-0755.1
NC_000911:2777447:2799650279965028010141365Synechocystis sp. PCC 6803, complete genomeperiplasmic binding protein of ABC transporter for natural amino acids2e-0654.3
NC_017039:2775275:2797478279747827988421365Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeneutral amino acids ABC transporter substrate-binding protein2e-0654.3
NC_017052:2775263:2797466279746627988301365Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeneutral amino acids ABC transporter substrate-binding protein2e-0654.3
NC_017277:2776264:2798467279846727998311365Synechocystis sp. PCC 6803, complete genomeneutral amino acids ABC transporter substrate-binding protein2e-0654.3
NC_006361:5546232:5555078555507855563521275Nocardia farcinica IFM 10152, complete genomehypothetical protein2e-0653.9
NC_004193:701622:7224667224667236651200Oceanobacillus iheyensis HTE831, complete genomebranched-chain amino acid ABC transporter amino acid-binding protein5e-0652.8
NC_014641:20103:4203442034432091176Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceextracellular ligand-binding receptor 66e-0652.4
NC_014828:2497462:2514413251441325156571245Ethanoligenens harbinense YUAN-3 chromosome, complete genomeABC transporter, periplasmic solute-binding protein, putative6e-0652.4
NC_011386:1727203:1730320173032017315011182Oligotropha carboxidovorans OM5, complete genomeextracellular ligand-binding receptor1e-0551.6