Pre_GI Gene

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Host: NC_008526 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008526:250000 Lactobacillus casei ATCC 334, complete genome

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
250481251167687Cell wall-associated hydrolaseQuickGO ontologyBLASTP
251612252370759lactose transport regulatorQuickGO ontologyBLASTP
252455253237783Glycosyltransferase related enzymeQuickGO ontologyBLASTP
253256253999744Predicted integral membrane proteinQuickGO ontologyBLASTP
254108254440333hypothetical proteinBLASTP
254726255325600Signal peptidase IQuickGO ontologyBLASTP
255403256341939ADP-ribosylglycohydrolaseQuickGO ontologyBLASTP
2567212582681548ATPase component of ABC transporter with duplicated ATPase domainsQuickGO ontologyBLASTP
258445259185741Methylase for ubiquinonemenaquinone biosynthesisQuickGO ontologyBLASTP
259510261077156816S ribosomal RNAQuickGO ontologyBLASTP
261698264212251523S ribosomal RNAQuickGO ontologyBLASTP
2644142645151025S ribosomal RNAQuickGO ontologyBLASTP
264629264943315Thiol-disulfide isomerase and thioredoxinQuickGO ontologyBLASTP
264946265722777hypothetical proteinBLASTP
265744266262519hypothetical proteinBLASTP
266338266595258hypothetical proteinBLASTP
2668772680701194ABC-type branched-chain amino acid transport system periplasmic componentQuickGO ontologyBLASTP
268106268984879Branched-chain amino acid ABC-type transport system permease componentQuickGO ontologyBLASTP
268989269939951Predicted amino acid ABC-type transport system permease componentQuickGO ontologyBLASTP
269936270721786ABC-type branched-chain amino acid transport system ATPase componentQuickGO ontologyBLASTP
270714271427714ABC-type branched-chain amino acid transport system ATPase componentQuickGO ontologyBLASTP