Pre_GI Gene

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Host: NC_008543 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008543:2035292 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
20345222035295774ABC transporter relatedQuickGO ontologyBLASTP
203529220365631272inner-membrane translocatorQuickGO ontologyBLASTP
20365752037534960inner-membrane translocatorQuickGO ontologyBLASTP
203768520388031119Extracellular ligand-binding receptorQuickGO ontologyBLASTP
20395892040242654hypothetical proteinBLASTP
20403992040854456hypothetical proteinBLASTP
20413332041821489hypothetical proteinBLASTP
204183020463144485YD repeat proteinQuickGO ontologyBLASTP
20463222046744423hypothetical proteinBLASTP
204677320488932121Rhs element Vgr proteinQuickGO ontologyBLASTP
20492982049810513OmpAMotB domain proteinQuickGO ontologyBLASTP
204989720511651269diguanylate cyclaseQuickGO ontologyBLASTP
20511622051959798hypothetical proteinBLASTP
20522942053181888transcriptional regulator LysR familyQuickGO ontologyBLASTP