Pre_GI: BLASTP Hits

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Query: NC_012988:1777618:1790443 Methylobacterium extorquens DM4, complete genome

Start: 1790443, End: 1790928, Length: 486

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Methylobacterium extorquens DM4 was isolated from soil contaminated with halogenated (chlorine-containing) hydrocarbons. This organism is able to use dichloromethane as a sole carbon and energy source. Dichloromethane, an industrial solvent, is toxic and carcinogenic. This compound is water soluble and can easily contaminate groundwater. Methylobacterium chloromethanicum was isolated from soil at a petrochemical factory in Tatarstan, Russia. This organism is able to grow using chloromethane as the sole carbon and energy source.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010725:356609:3586503586503598911242Methylobacterium populi BJ001, complete genome6e-55213
NC_011757:276953:2927672927672940981332Methylobacterium chloromethanicum CM4, complete genomeDNA-directed DNA polymerase8e-55212
NC_012988:4262631:4265341426534142666721332Methylobacterium extorquens DM4, complete genomeDNA polymerase V subunit C8e-55212
NC_010725:1419272:1469060146906014702381179Methylobacterium populi BJ001, complete genome8e-55212
NC_010172:3894652:3897842389784238992781437Methylobacterium extorquens PA1, complete genomeDNA-directed DNA polymerase1e-54211
NC_010510:534024:5400675400675413951329Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeDNA-directed DNA polymerase2e-52204
NC_011894:7109374:7118741711874171200691329Methylobacterium nodulans ORS 2060, complete genomeUMUC domain protein DNA-repair protein7e-50196
NC_011894:5056901:507349250734925074133642Methylobacterium nodulans ORS 2060, complete genomehypothetical protein8e-39159
NC_011894:6888562:691837069183706918834465Methylobacterium nodulans ORS 2060, complete genomehypothetical protein9e-32135
NC_011894:585637:617963617963618247285Methylobacterium nodulans ORS 2060, complete genomeDNA-directed DNA polymerase4e-25113
NC_015703:4483500:4516981451698145182491269Runella slithyformis DSM 19594 chromosome, complete genomeDNA-directed DNA polymerase5e-25113
NC_003228:2245181:2248666224866622499491284Bacteroides fragilis NCTC 9343, complete genomeputative RumB/ImpB like DNA repair protein1e-24112
NC_006347:2190000:2190977219097721922601284Bacteroides fragilis YCH46, complete genomeSOS mutagenesis and repair protein UmuC homolog3e-24110
NC_016776:2237404:2239666223966622409491284Bacteroides fragilis 638R, complete genomeputative RumB/ImpB like DNA repair protein3e-24110
NC_014532:3596097:3628379362837936296561278Halomonas elongata DSM 2581, complete genomeDNA-directed DNA polymerase6e-24109
NC_015970:19850:2427124271255301260Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, completeDNA-directed DNA polymerase8e-24109
NC_015731:2460248:2458963245896324602551293Nitrosomonas sp. Is79A3 chromosome, complete genomeUMUC domain-containing protein DNA-repair protein2e-23108
NC_008255:1701195:1719517171951717207791263Cytophaga hutchinsonii ATCC 33406, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair2e-22104
NC_015222:2475792:2495405249540524967001296Nitrosomonas sp. AL212 chromosome, complete genomeDNA-directed DNA polymerase5e-22103
NC_008341:29038:4657946579478741296Nitrosomonas eutropha C91 plasmid1, complete sequenceDNA-directed DNA polymerase5e-22103
NC_014394:2577949:2587767258776725890411275Gallionella capsiferriformans ES-2 chromosome, complete genomeDNA-directed DNA polymerase3e-21100
NC_015731:2400526:2420024242002424211001077Nitrosomonas sp. Is79A3 chromosome, complete genome2e-2098.2
NC_013850:1887556:1936856193685619381211266Klebsiella variicola At-22 chromosome, complete genomeDNA-directed DNA polymerase3e-2097.4
NC_012969:1574330:1589660158966015909521293Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeDNA-directed DNA polymerase4e-2097.1
NC_015410:2351464:2380712238071223819711260Pseudomonas mendocina NK-01 chromosome, complete genomeultraviolet light resistance protein B5e-2096.7
NC_011283:3177350:3185304318530431865691266Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuC2e-1995.1
NC_014733:1073540:1081149108114910824411293Methylovorus sp. MP688 chromosome, complete genomeDNA-directed DNA polymerase2e-1995.1
NC_009656:44500:9539895398964801083Pseudomonas aeruginosa PA7 chromosome, complete genomeultraviolet light resistance protein B2e-1994.7
NC_011894:6295807:630683863068386307086249Methylobacterium nodulans ORS 2060, complete genome2e-1994.7
NC_014733:1573171:1588662158866215899541293Methylovorus sp. MP688 chromosome, complete genomeDNA-directed DNA polymerase3e-1994
NC_011894:3988500:400465740046574005016360Methylobacterium nodulans ORS 2060, complete genomehypothetical protein6e-1993.2
NC_011894:5056901:510234551023455102704360Methylobacterium nodulans ORS 2060, complete genomehypothetical protein6e-1993.2
NC_007626:2204767:2245935224593522472121278Magnetospirillum magneticum AMB-1, complete genomeNucleotidyltransferase/DNA polymerase involved in DNA repair9e-1992.4
NC_006677:2575345:2579904257990425811661263Gluconobacter oxydans 621H, complete genomeSOS (error prone) mutagenesis protein UmuC1e-1892
NC_007963:1552761:1564357156435715656371281Chromohalobacter salexigens DSM 3043, complete genomeDNA-directed DNA polymerase1e-1892
NC_016810:2027311:2037460203746020387281269Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein2e-1891.3
NC_016856:2085283:2091297209129720925651269Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit UmuC2e-1891.3
NC_016857:2027311:2037460203746020387281269Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit UmuC2e-1891.3
NC_016863:2029340:2039489203948920407571269Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit UmuC2e-1891.3
NC_017046:2026672:2036821203682120380891269Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA repair protein2e-1891.3
NC_009512:5632591:5657225565722556585051281Pseudomonas putida F1, complete genomeDNA-directed DNA polymerase2e-1891.3
NC_021066:2197490:2204060220406022053251266Raoultella ornithinolytica B6, complete genomeDNA polymerase V subunit UmuC4e-1890.5
NC_016514:2476359:2487016248701624882841269Enterobacter cloacae EcWSU1 chromosome, complete genomeUmuC5e-1890.1
NC_012125:4536383:4555441455544145567151275Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA polymerase V subunit UmuC5e-1890.1
NC_003198:4453457:4472479447247944737531275Salmonella enterica subsp. enterica serovar Typhi str. CT18,DNA polymerase IV5e-1890.1
NC_016832:4425330:4444352444435244456261275Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-1890.1
NC_016445:89500:8996389963911351173Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA polymerase V6e-1889.7
NC_012668:3037345:3058519305851930596221104Vibrio cholerae MJ-1236 chromosome 1, complete sequenceerror-prone repair protein UmuC7e-1889.7
NC_009648:1541699:1596110159611015971981089Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA polymerase V subunit UmuC1e-1789.4
NC_009453:36599:5178151781530791299Arthrobacter sp. Rue61a plasmid pAL1, complete sequenceputative UmuC-like protein1e-1789
NC_020054:4983691:4993524499352449948101287Fibrella aestuarina BUZ 2 drat genomeDNA polymerase V1e-1789
NC_010554:2646806:2725243272524327265111269Proteus mirabilis HI4320, complete genomeDNA repair protein1e-1789
NC_010943:3069082:3084429308442930857181290Stenotrophomonas maltophilia K279a, complete genomeputative UV protection and mutation protein1e-1789
NC_016832:948029:9794149794149806821269Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-1788.6
NC_004631:948054:9817399817399830071269Salmonella enterica subsp. enterica serovar Typhi Ty2, completeDNA polymerase IV1e-1788.6
NC_009436:2395913:2403234240323424045021269Enterobacter sp. 638, complete genomeDNA polymerase V subunit UmuC1e-1788.6
NC_007604:1586243:1606746160674616080021257Synechococcus elongatus PCC 7942, complete genomeDNA-directed DNA polymerase2e-1788.2
NC_008757:151862:1550911550911562391149Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeUMUC domain protein DNA-repair protein2e-1787.8
NC_003902:3514000:3524399352439935256851287Xanthomonas campestris pv. campestris str. ATCC 33913, completepolymerase V subunit3e-1787.4
NC_006576:2683467:7716771689721257Synechococcus elongatus PCC 6301, complete genomeDNA polymerase V6e-1786.7
NC_009436:2056000:2070165207016520714271263Enterobacter sp. 638, complete genomeDNA-directed DNA polymerase8e-1786.3
NC_015167:1154497:1154497115449711557531257Cellulophaga lytica DSM 7489 chromosome, complete genomeDNA-directed DNA polymerase7e-1786.3
NC_016816:2925459:2936866293686629381281263Pantoea ananatis LMG 5342, complete genomeDNA polymerase V subunit UmuC7e-1786.3
NC_012988:4292815:4339620433962043408161197Methylobacterium extorquens DM4, complete genomeDNA-directed DNA polymerase9e-1785.9
NC_016002:1741109:1748926174892617501911266Pseudogulbenkiania sp. NH8B, complete genomeDNA-directed DNA polymerase1e-1685.9
NC_016002:2179969:2187277218727721885421266Pseudogulbenkiania sp. NH8B, complete genomeDNA-directed DNA polymerase1e-1685.9
NC_021066:1778000:1784007178400717852721266Raoultella ornithinolytica B6, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair1e-1685.5
NC_015663:4488058:4499510449951045007751266Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA polymerase V subunit UmuC1e-1685.1
NC_011283:2836000:2880660288066028817781119Klebsiella pneumoniae 342 chromosome, complete genome3e-1684.3
NC_016816:4129299:4158370415837041593981029Pantoea ananatis LMG 5342, complete genomeDNA polymerase V subunit UmuC5e-1683.6
NC_020260:1293860:1300668130066813019301263Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuC16e-1683.2
NC_009792:1739970:1746105174610517473701266Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-1682.8
NC_015663:4735808:4743545474354547448101266Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA polymerase V subunit UmuC1e-1582.4
NC_009778:1222273:1227942122794212291261185Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1582
NC_014842:19411:4458444584458581275Pantoea sp. At-9b plasmid pPAT9B05, complete sequenceDNA-directed DNA polymerase2e-1581.6
NC_015761:1599000:1604619160461916058841266Salmonella bongori NCTC 12419, complete genomeDNA repair protein2e-1581.6
NC_013282:1842412:1849918184991818511801263Cronobacter turicensis, complete genomeProtein umuC2e-1581.6
NC_015424:2726223:2763991276399127652681278Aeromonas veronii B565 chromosome, complete genomeprotein UmuC3e-1580.9
NC_011751:1446073:1477461147746114787291269Escherichia coli UMN026 chromosome, complete genomeDNA polymerase V subunit UmuC4e-1580.5
NC_020064:1962172:1974884197488419761521269Serratia marcescens FGI94, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair4e-1580.5
NC_011881:1:4351435156311281Arthrobacter chlorophenolicus A6 plasmid pACHL02, completeDNA-directed DNA polymerase4e-1580.5
NC_009801:1296488:1321867132186713231351269Escherichia coli E24377A, complete genomeprotein UmuC4e-1580.5
NC_010473:1245284:1270650127065012719181269Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase V, subunit C4e-1580.5
NC_012967:1205985:1231336123133612326041269Escherichia coli B str. REL606 chromosome, complete genomeDNA polymerase V subunit UmuC4e-1580.5
NC_016609:8251438:8251438825143882527211284Niastella koreensis GR20-10 chromosome, complete genomeDNA-directed DNA polymerase5e-1580.1
NC_008570:2216736:2248997224899722502711275Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuC1e-1479
NC_015566:3269469:3277699327769932789671269Serratia sp. AS12 chromosome, complete genomeDNA-directed DNA polymerase2e-1478.2
NC_014733:1223359:1230133123013312314251293Methylovorus sp. MP688 chromosome, complete genomeDNA-directed DNA polymerase2e-1478.2
NC_011601:1315746:1337755133775513390231269Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA polymerase V subunit UmuC3e-1477.8
NC_004431:1443968:1468502146850214697701269Escherichia coli CFT073, complete genomeDNA polymerase IV3e-1477.8
NC_008253:1228485:1251657125165712529251269Escherichia coli 536, complete genomeUmuC protein3e-1477.4
NC_011745:1287714:1311024131102413122861263Escherichia coli ED1a chromosome, complete genomeDNA polymerase V subunit UmuC3e-1477.4
NC_014305:97055:1108391108391121131275Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDNA polymerase V subunit5e-1477
NC_017047:1934430:1944000194400019452651266Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase V subunit UmuC6e-1476.6
NC_014910:1912552:1919375191937519206611287Alicycliphilus denitrificans BC chromosome, complete genomeDNA-directed DNA polymerase6e-1476.6
NC_016830:4999946:5011546501154650128231278Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuC8e-1476.3
NC_007005:1605000:1612927161292716142071281Pseudomonas syringae pv. syringae B728a, complete genomeDNA-directed DNA polymerase1e-1375.5
NC_011742:1221416:1245958124595812472261269Escherichia coli S88 chromosome, complete genomeDNA polymerase V subunit UmuC2e-1374.7
NC_020418:2868000:2880167288016728811771011Morganella morganii subsp. morganii KT, complete genomeError-prone, lesion bypass DNA polymerase V (UmuC)2e-1374.7
NC_008573:195317:233152233152233817666Shewanella sp. ANA-3 plasmid 1, complete sequenceumuC protein3e-1374.3
NC_007516:1086948:1105898110589811071721275Synechococcus sp. CC9605, complete genomeDNA-directed DNA polymerase3e-1374.3
NC_016830:3869572:3877640387764038789171278Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuC3e-1373.9
NC_011894:4013830:402568340256834026012330Methylobacterium nodulans ORS 2060, complete genome4e-1373.6
NC_004129:2234851:2244215224421522454951281Pseudomonas fluorescens Pf-5, complete genomeultraviolet light resistance protein B, interruption-C1e-1272
NC_005773:866157:9245179245179255331017Pseudomonas syringae pv. phaseolicola 1448A, complete genomeRulB1e-1272
NC_008570:1143578:1164200116420011654591260Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuC4e-1270.5
NC_007275:1:2175217534581284Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeRulB protein5e-1270.5
NC_004129:5373886:5421354542135454226251272Pseudomonas fluorescens Pf-5, complete genomeultraviolet light resistance protein B, interruption-C5e-1270.5
NC_012968:2000218:201294120129412013399459Methylotenera mobilis JLW8, complete genome6e-1270.1
NC_009832:4482500:450469545046954505105411Serratia proteamaculans 568, complete genomeUV protection protein8e-1269.3
NC_004349:3938:1007810078113341257Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceSOS mutagenesis protein RulB9e-1269.3
NC_009927:253250:2550982550982563631266Acaryochloris marina MBIC11017 plasmid pREB2, complete sequenceDNA polymerase V, putative1e-1169.3
NC_015424:3520783:3553264355326435545231260Aeromonas veronii B565 chromosome, complete genomeprotein UmuC1e-1168.9
NC_011761:1499500:1513748151374815150311284Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeumuC protein1e-1168.9
NC_017986:4790482:482496648249664825310345Pseudomonas putida ND6 chromosome, complete genomeDNA-directed DNA polymerase1e-1168.6
NC_008321:3815940:3837529383752938387851257Shewanella sp. MR-4, complete genomeDNA-directed DNA polymerase2e-1168.2
NC_015740:2998500:2999374299937430005281155Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeimpB/mucB/samB family protein2e-1167.8
NC_009434:3611738:3625281362528136262911011Pseudomonas stutzeri A1501, complete genomeimpB/mucB/samB family protein3e-1167.8
NC_020541:1786500:1806286180628618075751290Rhodanobacter sp. 2APBS1, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair4e-1167.4
NC_012108:442493:457810457810458202393Desulfobacterium autotrophicum HRM2, complete genomeDNA-directed DNA polymerase4e-1167
NC_009837:155284:157431157431157778348Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequencehypothetical protein2e-1064.7
NC_010488:48868:660686606866457390Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence3e-1064.3
NC_016901:5130147:5149362514936251506181257Shewanella baltica OS678 chromosome, complete genomeDNA-directed DNA polymerase6e-1063.2
NC_009665:5072413:5091613509161350928691257Shewanella baltica OS185 chromosome, complete genomeDNA-directed DNA polymerase6e-1063.2
NC_009997:5188221:5208740520874052099961257Shewanella baltica OS195, complete genomeDNA-directed DNA polymerase6e-1063.2
NC_016901:2661971:266591426659142666699786Shewanella baltica OS678 chromosome, complete genome9e-1062.8
NC_012660:3689223:370123337012333701637405Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein9e-1062.8
NC_009997:2699644:270601227060122706782771Shewanella baltica OS195, complete genomeDNA-directed DNA polymerase1e-0962.4
NC_005071:671084:6898236898236910971275Prochlorococcus marinus str. MIT 9313, complete genomeputative UmuC protein2e-0962
NC_013282:1842412:185728818572881857563276Cronobacter turicensis, complete genomehypothetical protein5e-0960.5
NC_009052:4168776:4175354417535441766101257Shewanella baltica OS155, complete genomeDNA-directed DNA polymerase4e-0960.5
NC_015572:2186394:2186394218639421876951302Methylomonas methanica MC09 chromosome, complete genomeDNA-directed DNA polymerase5e-0960.1
NC_020260:1293860:1306660130666013078411182Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuC17e-0959.7
NC_004459:349500:3706513706513719071257Vibrio vulnificus CMCP6 chromosome I, complete sequenceNucleotidyltransferase/DNA polymerase involved in DNA repair1e-0858.9
NC_005966:2653945:266747026674702667817348Acinetobacter sp. ADP1, complete genomefragment of umuC2e-0858.2
NC_010334:2615260:2621348262134826226011254Shewanella halifaxensis HAW-EB4, complete genomeDNA-directed DNA polymerase3e-0857.4
NC_010172:5447189:545502654550265455562537Methylobacterium extorquens PA1, complete genomehypothetical protein1e-0755.8
NC_010334:2615260:2641539264153926427921254Shewanella halifaxensis HAW-EB4, complete genomeDNA-directed DNA polymerase2e-0755.1