Pre_GI: BLASTP Hits

Some Help

Query: NC_012962:1041518:1064086 Photorhabdus asymbiotica, complete genome

Start: 1064086, End: 1064976, Length: 891

Host Lineage: Photorhabdus asymbiotica; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a North American clinical isolate from human blood. Photorhabdus asymbiota, formerly Xenorhabdus luminescens, has been isolated from human wound and blood infections often in association with spider bites. This species can also be isolated from the entomopathogenic nematode Heterorhabditis indica. Photorhabdus asymbiota is divided into two subspecies, subsp. australis which contains the Australian clinical isolates and subsp. asymbiota which contains the North American isolates. Photorhabdus is currently subdivided into three species, luminescens, temperate and asymbiotica all of which have been isolated as symbionts of heterorhabditid nematodes. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:4059436:405943640594364060326891Escherichia coli ATCC 8739, complete genometranscriptional regulator, AraC family7e-113406
NC_017986:5605197:563115756311575632029873Pseudomonas putida ND6 chromosome, complete genomeHelix-turn-helix domain-containing protein2e-23109
NC_010338:4148667:416203941620394162932894Caulobacter sp. K31, complete genometranscriptional regulator, AraC family3e-23109
NC_012880:1585255:160704616070461608035990Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family5e-22105
NC_013730:4811911:482916548291654830043879Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family1e-1790.5
NC_015376:1752883:177295817729581773878921Burkholderia gladioli BSR3 chromosome chromosome 2, completeAraC family transcriptional regulator1e-1687.4
NC_014041:1395761:140434314043431404846504Zunongwangia profunda SM-A87 chromosome, complete genome4-hydroxyphenylacetate catabolism regulatory protein HpaA3e-1685.9
NC_010623:1961685:201867520186752019634960Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family3e-1582.8
NC_014391:1812500:181434718143471815264918Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein1e-1273.9
NC_014815:2055286:205897420589742059891918Micromonospora sp. L5 chromosome, complete genomehelix-turn-helix, arac domain protein1e-1273.9
NC_014622:724000:725554725554726447894Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator6e-1271.6
NC_016609:4233701:424485042448504245719870Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator6e-1271.6
NC_018524:4988810:501243150124315012778348Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein9e-1271.2
NC_013037:1015210:103550010355001036360861Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family1e-1170.5
NC_015434:1885373:188757818875781888468891Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix, arac domain-containing protein3e-1169.3
NC_018681:5490963:551799755179975518839843Nocardia brasiliensis ATCC 700358 chromosome, complete genometranscriptional regulatory protein4e-1168.9
NC_009441:3522519:353988035398803540680801Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein5e-1168.6
NC_014934:4834000:483478048347804835673894Cellulophaga algicola DSM 14237 chromosome, complete genometranscriptional regulator, arac family5e-1168.6
NC_013730:4502965:452028045202804521137858Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family1e-1067.8
NC_021177:1736854:176858517685851769463879Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator1e-1067.4
NC_009901:3317068:332237033223703323242873Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, AraC family2e-1067
NC_013406:4478000:449808544980854498942858Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator1e-1067
NC_013132:705314:708270708270709112843Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family1e-1067
NC_016582:1639375:165691016569101657806897Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator2e-1066.2
NC_018750:1835500:184518618451861846073888Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, AraC family3e-1066.2
NC_010572:6463939:647037164703716471249879Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative AraC-family transcriptional regulator3e-1066.2
NC_013406:3874157:388727238872723888165894Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator3e-1065.9
NC_016609:1305570:130853413085341309397864Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator1e-0963.9
NC_003228:2473956:247395624739562474882927Bacteroides fragilis NCTC 9343, complete genomeputative AraC family transcriptional regulator4e-0962
NC_004663:2437760:247120524712052472053849Bacteroides thetaiotaomicron VPI-5482, complete genometranscriptional regulator5e-0962
NC_003228:3085793:308968830896883090575888Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family transcriptional regulator1e-0860.8
NC_002950:1511955:153145315314531532301849Porphyromonas gingivalis W83, complete genometranscriptional regulator, AraC family1e-0860.8
NC_002950:879930:883361883361884209849Porphyromonas gingivalis W83, complete genometranscriptional regulator, AraC family1e-0860.8
NC_004129:926479:934135934135934989855Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family1e-0860.8
NC_013730:778076:782821782821783741921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family1e-0860.8
NC_019978:2532640:253574925357492536591843Halobacteroides halobius DSM 5150, complete genomeDNA-binding domain-containing protein, AraC-type1e-0860.5
NC_016776:3973428:398739639873963988241846Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein2e-0860.5
NC_020054:4161049:4187679418767941887041026Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family2e-0860.1
NC_013132:3877500:390580239058023906800999Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family2e-0860.1
NC_003228:3934770:394874239487423949587846Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family regulatory protein2e-0860.1
NC_013730:4502965:452139745213974522266870Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family3e-0859.7
NC_006347:4031000:404498540449854045563579Bacteroides fragilis YCH46, complete genometranscriptional regulator3e-0859.3
NC_020054:465413:482880482880483734855Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family4e-0858.9
NC_009614:3476000:349131434913143492150837Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator4e-0858.9
NC_015311:2626850:264619326461932647041849Prevotella denticola F0289 chromosome, complete genomeAraC family transcriptional regulator6e-0858.2
NC_004547:1873390:188300518830051883862858Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator7e-0858.2
NC_006347:3805500:3809824380982438125472724Bacteroides fragilis YCH46, complete genometwo-component system sensor histidine kinase/response regulator hybrid2e-0757
NC_015703:4483500:451260045126004513517918Runella slithyformis DSM 19594 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_020054:3132478:313830531383053139264960Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family2e-0756.6
NC_009614:769851:7698517698517737833933Bacteroides vulgatus ATCC 8482 chromosome, complete genometwo-component system sensor histidine kinase/response regulator, hybrid2e-0756.6
NC_019968:1084288:110312511031251103973849Prevotella dentalis DSM 3688 chromosome 2, complete sequenceDNA-binding domain-containing protein, AraC-type2e-0756.2
NC_013216:3061491:306402630640263064991966Desulfotomaculum acetoxidans DSM 771, complete genometranscriptional regulator, AraC family3e-0756.2
NC_010322:3315024:332559533255953325978384Pseudomonas putida GB-1 chromosome, complete genomeAraC family transcriptional regulator5e-0755.5
NC_014622:724000:7388937388937405601668Paenibacillus polymyxa SC2 chromosome, complete genomeiron-hydroxamate ABC transporter periplasmic protein4e-0755.5
NC_009615:919495:925663925663926541879Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscriptional regulator4e-0755.5
NC_010511:5467009:548506754850675485906840Methylobacterium sp. 4-46 chromosome, complete genomeAraC family transcriptional regulator6e-0755.1
NC_004663:1365429:137704613770461377882837Bacteroides thetaiotaomicron VPI-5482, complete genomeAraC-type transcription regulator6e-0755.1
NC_008525:561000:561046561046561876831Pediococcus pentosaceus ATCC 25745, complete genomeAraC-like transcriptional regulator (HTH and ligand binding domain)6e-0755.1
NC_004547:1837500:184938418493841850334951Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator6e-0755.1
NC_005126:4423964:444190744419074442725819Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-0754.7
NC_013730:2359939:235993923599392360808870Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family7e-0754.7
NC_013132:7204082:722428772242877225204918Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family8e-0754.7
NC_016114:7282882:730901673090167309861846Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_004663:2246756:224892422489242249814891Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator1e-0654.3
NC_014622:724000:741909741909742790882Paenibacillus polymyxa SC2 chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_007907:321537:334904334904335725822Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0653.9
NC_012962:1189021:118902111890211189839819Photorhabdus asymbiotica, complete genomesimilar to the transcriptional activator protein exsa/virf2e-0653.5
NC_017188:3900951:391989739198973920484588Bacillus amyloliquefaciens TA208 chromosome, complete genomemethylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) protein2e-0653.5
NC_017191:3901914:392158939215893922176588Bacillus amyloliquefaciens XH7 chromosome, complete genomebifunctional methylphosphotriester-DNA alkyltransferase/transcriptional regulator2e-0653.5
NC_016609:2150863:215929021592902160141852Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_016830:4914406:491949249194924920238747Pseudomonas fluorescens F113 chromosome, complete genometwo-component response regulator3e-0653.1
NC_015379:5002595:500754250075425008411870Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative response regulator, YesN family3e-0653.1
NC_015690:4592582:4614154461415446153981245Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo component AraC family transcriptional regulator3e-0652.8
NC_014655:2366201:237290323729032373763861Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, arac family4e-0652.4
NC_011985:3869998:388680038868003887690891Agrobacterium radiobacter K84 chromosome 1, complete genometranscriptional regulator protein4e-0652
NC_011000:1216430:123920212392021240122921Burkholderia cenocepacia J2315 chromosome 1, complete sequence6e-0651.6
NC_013941:378555:396828396828397718891Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAraC family transcriptional regulator7e-0651.6
NC_008563:318993:337148337148338038891Escherichia coli APEC O1, complete genomeputative transcriptional regulator9e-0651.2
NC_008253:334467:392253392253393110858Escherichia coli 536, complete genomeputative bacterial regulatory helix-turn-helix proteins, AraC family9e-0651.2
NC_011601:273430:295401295401296258858Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding transcriptional regulator, AraC-type8e-0651.2
NC_011742:291237:324923324923325780858Escherichia coli S88 chromosome, complete genomePutatve transcriptional regulator ykgA8e-0651.2
NC_004431:364000:400086400086400976891Escherichia coli CFT073, complete genomeHypothetical transcriptional regulator ykgA8e-0651.2
NC_016609:4834378:487799848779984878891894Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator8e-0651.2
NC_007946:289425:335558335558336448891Escherichia coli UTI89, complete genomehypothetical transcriptional regulator YkgA9e-0651.2