Pre_GI Gene

Some Help

Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:4914406 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
491440649157221317Von Willebrand factor type A domain protein associated with Flp pilus assemblyQuickGO ontologyBLASTP
49157944916543750protein RcpCCpaBQuickGO ontologyBLASTP
491662249179501329putative ATPase with chaperone activity associated with Flp pilus assemblyQuickGO ontologyBLASTP
49179534918483531protein TadVCpaAQuickGO ontologyBLASTP
49185104918704195hypothetical proteinBLASTP
49188624919056195flp fap pilin componentQuickGO ontologyBLASTP
49194924920238747two-component response regulatorQuickGO ontologyBLASTP
49202864920606321MarR family transcriptional regulatorQuickGO ontologyBLASTP
49209074921620714hypothetical proteinBLASTP
492189149232011311Pyruvate-formate lyase-activating enzyme like proteinQuickGO ontologyBLASTP
492333349243431011cystathionine gamma-lyaseQuickGO ontologyBLASTP
492440549256611257class I and II aminotransferaseQuickGO ontologyBLASTP
49257274926359633LysE family transporterQuickGO ontologyBLASTP
4926635492670773tRNA-GlyQuickGO ontology
4926894492696673tRNA-GlyQuickGO ontology
49274164928174759hypothetical proteinBLASTP
492836449303311968methyl-accepting chemotaxis protein I serine chemoreceptor proteinQuickGO ontologyBLASTP
493044249318301389transcriptional regulator GntR family domain Aspartate aminotransferaseQuickGO ontologyBLASTP
49320364932797762short-chain dehydrogenasereductase family oxidoreductaseQuickGO ontologyBLASTP
493302449340281005oxidoreductaseQuickGO ontologyBLASTP
49341894934923735protein PyrFQuickGO ontologyBLASTP