Pre_GI: BLASTP Hits

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Query: NC_012917:833721:864129 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 864129, End: 865064, Length: 936

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1038500:104986410498641050805942Pectobacterium wasabiae WPP163, complete genometranscriptional antiterminator, BglG1e-170598
NC_004547:913553:948918948918949769852Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative beta-glucoside operon antiterminator3e-158557
NC_016641:373623:402726402726403562837Paenibacillus terrae HPL-003 chromosome, complete genometranscription antiterminator LicT8e-65247
NC_006270:4014000:403209640320964032929834Bacillus licheniformis ATCC 14580, complete genometranscriptional antiterminator2e-58226
NC_012917:2786283:280111228011122801975864Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional antiterminator, BglG6e-58224
NC_006270:741731:761197761197762045849Bacillus licheniformis ATCC 14580, complete genometranscriptional antiterminator (BglG family)6e-58224
NC_006322:741516:760981760981761829849Bacillus licheniformis ATCC 14580, complete genomehypothetical protein6e-58224
NC_014622:1514416:153176415317641532597834Paenibacillus polymyxa SC2 chromosome, complete genomebglg family transcriptional antiterminator9e-57220
NC_013421:2972269:300172530017253002588864Pectobacterium wasabiae WPP163, complete genometranscriptional antiterminator, BglG9e-57220
NC_014410:615992:637397637397638224828Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional antiterminator, BglG4e-56218
NC_019842:3755275:375756437575643758391828Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,LicT4e-56218
NC_016641:3173250:319145331914533192286834Paenibacillus terrae HPL-003 chromosome, complete genomebglg family transcriptional antiterminator1e-55216
NC_016047:2658000:266550526655052666353849Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetranscription antiterminator1e-55216
NC_014479:3825195:382519538251953826028834Bacillus subtilis subsp. spizizenii str. W23 chromosome, completetranscriptional antiterminator (BglG family) protein8e-55214
NC_006582:3949832:395328839532883954115828Bacillus clausii KSM-K16, complete genometranscriptional antiterminator, BglG family4e-54211
NC_012880:1613485:161539716153971616227831Dickeya dadantii Ech703, complete genometranscriptional antiterminator, BglG2e-53209
NC_020063:3104000:311114431111443111986843Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional antiterminator1e-52207
NC_020291:1045058:106055510605551061400846Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscription antiterminator1e-52207
NC_008800:2298000:230718223071822308015834Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,beta-glucoside operon antiterminator8e-53207
NC_013315:435599:435599435599436435837Clostridium difficile CD196 chromosome, complete genomebeta-glucoside bgl operon transcription antiterminator3e-52205
NC_009089:428075:460765460765461601837Clostridium difficile 630, complete genomebeta-glucoside bgl operon transcription antiterminator5e-52204
NC_002570:832480:845788845788846546759Bacillus halodurans C-125, complete genometranscription antiterminator (BigG family)7e-51201
NC_021182:1045218:105904110590411059946906Clostridium pasteurianum BC1, complete genometranscriptional antiterminator2e-47189
NC_008541:2119883:212569021256902126520831Arthrobacter sp. FB24 chromosome 1, complete sequencetranscriptional antiterminator, BglG2e-47189
NC_012912:844339:858343858343859212870Dickeya zeae Ech1591, complete genometranscriptional antiterminator, BglG8e-47187
NC_016641:3272500:329680632968063297744939Paenibacillus terrae HPL-003 chromosome, complete genomeBigG family transcription antiterminator1e-46186
NC_011283:2627050:264696026469602647793834Klebsiella pneumoniae 342 chromosome, complete genometranscriptional antiterminator3e-44179
NC_012563:811993:826616826616827455840Clostridium botulinum A2 str. Kyoto, complete genometranscriptional antiterminator, LicT4e-44178
NC_013850:2624899:264385626438562644689834Klebsiella variicola At-22 chromosome, complete genometranscriptional antiterminator, BglG4e-44178
NC_020207:1346579:138583113858311386568738Enterococcus faecium NRRL B-2354, complete genomeBeta-glucoside bgl operon antiterminator, BglG family6e-44177
NC_004337:3590323:384132238413223842143822Shigella flexneri 2a str. 301, complete genomepositive regulation of bgl operon1e-43177
NC_017316:203233:221668221668222438771Enterococcus faecalis OG1RF chromosome, complete genometranscription antiterminator LicT3e-43175
NC_014334:1039248:106171910617191062549831Lactobacillus casei str. Zhang chromosome, complete genomebeta-glucoside operon antiterminator4e-41168
NC_013515:1483471:148532414853241486163840Streptobacillus moniliformis DSM 12112, complete genometranscriptional antiterminator, BglG8e-41167
NC_016023:1725294:172529417252941726139846Bacillus coagulans 36D1 chromosome, complete genometranscriptional antiterminator BglG7e-40164
NC_012470:678661:690018690018690857840Streptococcus equi subsp. zooepidemicus, complete genometranscription antiterminator3e-39162
NC_019970:2263427:226979822697982270622825Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional antiterminator8e-39160
NC_015555:1989463:199786819978681998704837Thermoanaerobacterium xylanolyticum LX-11 chromosome, completetranscriptional antiterminator, BglG1e-38160
NC_017195:1411936:143385414338541434720867Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscription antiterminator, GlcT1e-37157
NC_008262:101731:113027113027113875849Clostridium perfringens SM101, complete genomeSACPA operon antiterminator (sacT)8e-37154
NC_014829:3822125:384634438463443847177834Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional antiterminator, BglG3e-36152
NC_004668:241352:255938255938256779842Enterococcus faecalis V583, complete genome2e-35149
NC_008261:64678:777267772678574849Clostridium perfringens ATCC 13124, complete genometranscription antiterminator2e-35149
NC_015687:1478668:150180815018081502671864Clostridium acetobutylicum DSM 1731 chromosome, complete genomeBglG family transcriptional antiterminator4e-35148
NC_012914:2360989:238471723847172385577861Paenibacillus sp. JDR-2, complete genometranscriptional antiterminator, BglG1e-34147
NC_021182:2921000:294752729475272948363837Clostridium pasteurianum BC1, complete genometranscriptional antiterminator1e-33144
NC_015601:1463500:146531814653181466166849Erysipelothrix rhusiopathiae str. Fujisawa, complete genometranscriptional antiterminator, BglG5e-33141
NC_013361:3823347:383520938352093836033825Escherichia coli O26:H11 str. 11368 chromosome, complete genomeantiterminator1e-31137
NC_010723:3395187:342819634281963429050855Clostridium botulinum E3 str. Alaska E43, complete genometranscription antiterminator LicT2e-31136
NC_016935:7426389:742849374284937429365873Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional antiterminator BglG6e-31134
NC_015690:7334786:733841373384137339285873Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional antiterminator, BglG8e-31134
NC_011742:3057444:306899030689903069871882Escherichia coli S88 chromosome, complete genometranscription antiterminator6e-30131
NC_011745:3197584:320944732094473210328882Escherichia coli ED1a chromosome, complete genomeputative transcription antiterminator6e-30131
NC_008253:2965573:297730929773092978133825Escherichia coli 536, complete genomeputative transcriptional antiterminator protein5e-30131
NC_010498:3023442:303530630353063036130825Escherichia coli SMS-3-5, complete genomeputative transcriptional antiterminator8e-30130
NC_007946:3125577:313712331371233137992870Escherichia coli UTI89, complete genomeantiterminator2e-28126
NC_007613:2699500:270940827094082710055648Shigella boydii Sb227, complete genomehypothetical protein1e-24114
NC_018265:75658:873328733288168837Melissococcus plutonius DAT561 plasmid 1, complete sequencetranscription antiterminator1e-23110
NC_014624:2996377:301194630119463012770825Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-1997.4
NC_003366:64908:101425101425102009585Clostridium perfringens str. 13, complete genomeprobable transcription antiterminator1e-1997.4
NC_014377:1985714:1997875199787519999622088Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional antiterminator, BglG family2e-0757
NC_003366:64908:101897101897102274378Clostridium perfringens str. 13, complete genomeprobable transcription antiterminator2e-0756.6
NC_014377:532816:5554125554125573791968Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional antiterminator, BglG1e-0654.3
NC_011969:4945441:4961027496102749629731947Bacillus cereus Q1 chromosome, complete genomemanr1e-0654.3
NC_016779:4969626:4983899498389949858451947Bacillus cereus F837/76 chromosome, complete genomeBglG family transcriptional antiterminator2e-0653.5
NC_012472:5015621:5029907502990750318531947Bacillus cereus 03BB102, complete genometranscriptional regulator3e-0652.8
NC_008600:5005345:5019631501963150215861956Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator3e-0652.8
NC_019978:2532640:2552799255279925555342736Halobacteroides halobius DSM 5150, complete genometranscriptional antiterminator4e-0652.4
NC_009725:2517428:2538466253846625404181953Bacillus amyloliquefaciens FZB42, complete genomeManR7e-0651.6
NC_019842:2575000:2592489259248925944411953Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,licABCH operon regulator8e-0651.6
NC_014377:1400544:1412036141203614149962961Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system transcriptional activator9e-0651.2