Pre_GI: BLASTP Hits

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Query: NC_012791:4794362:4820354 Variovorax paradoxus S110 chromosome 1, complete genome

Start: 4820354, End: 4824145, Length: 3792

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011206:2512667:2516056251605625196523597Acidithiobacillus ferrooxidans ATCC 53993, complete genomeexodeoxyribonuclease V, beta subunit0825
NC_020209:3797830:3794159379415937978333675Pseudomonas poae RE*1-1-14, complete genomeexodeoxyribonuclease V subunit beta0762
NC_014500:2479814:2500330250033025040043675Dickeya dadantii 3937 chromosome, complete genomeexonuclease V (RecBCD complex), subunit beta0753
NC_015740:3678342:3678342367834236820223681Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeexodeoxyribonuclease V subunit beta0697
NC_013889:1740858:1737139173713917408613723Thioalkalivibrio sp. K90mix chromosome, complete genomeexodeoxyribonuclease V, beta subunit0693
NC_018645:4945698:4953396495339649571633768Desulfobacula toluolica Tol2, complete genomeexodeoxyribonuclease V subunit beta0667
NC_013851:3478153:3489678348967834935323855Allochromatium vinosum DSM 180 chromosome, complete genomeexodeoxyribonuclease V, beta subunit0640
NC_018691:3496420:3492807349280734964303624Alcanivorax dieselolei B5 chromosome, complete genomeExodeoxyribonuclease V, beta subunit0639
NC_004459:1794540:1790923179092317945433621Vibrio vulnificus CMCP6 chromosome I, complete sequenceATP-dependent exoDNAse beta subunit2e-165583
NC_011745:3197584:3215233321523332187753543Escherichia coli ED1a chromosome, complete genomeexonuclease V subunit beta1e-144514
NC_007946:3125577:3142897314289731464483552Escherichia coli UTI89, complete genomeexodeoxyribonuclease V beta chain2e-144514
NC_010694:3055403:3055403305540330589393537Erwinia tasmaniensis, complete genomeExodeoxyribonuclease V beta chain2e-144513
NC_011742:3057444:3074776307477630783183543Escherichia coli S88 chromosome, complete genomeexonuclease V subunit beta2e-144513
NC_007613:2699500:2715195271519527187373543Shigella boydii Sb227, complete genomeATP-dependent dsDNA/ssDNA exonuclease V subunit8e-144512
NC_008253:2965573:2983115298311529866573543Escherichia coli 536, complete genomeexodeoxyribonuclease V beta chain5e-143509
NC_013361:3823347:3840997384099738445393543Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexonuclease V subunit beta1e-142508
NC_010498:3023442:3041092304109230446043513Escherichia coli SMS-3-5, complete genomeexodeoxyribonuclease V, beta subunit6e-142506
NC_007712:3382000:3401801340180134053433543Sodalis glossinidius str. 'morsitans', complete genomeexodeoxyribonuclease V beta subunit3e-130467
NC_010939:405477:4438164438164474243609Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeexodeoxyribonuclease V beta chain3e-112407
NC_010278:398521:4207614207614243693609Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,exodeoxyribonuclease V subunit beta2e-111404
NC_002663:564958:5899775899775936693693Pasteurella multocida subsp. multocida str. Pm70, complete genomeRecB8e-111402
NC_009053:393700:4160344160344196423609Actinobacillus pleuropneumoniae L20, complete genomeexodeoxyribonuclease V beta chain2e-110401
NC_019940:2546500:2567719256771925713003582Thioflavicoccus mobilis 8321 chromosome, complete genomeexodeoxyribonuclease V subunit beta2e-106388
NC_004061:498483:4984834984835020223540Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeexodeoxyribonuclease V 135 kDa polypeptide2e-93345
NC_010803:1436397:1454628145462814583083681Chlorobium limicola DSM 245, complete genomeexodeoxyribonuclease V, beta subunit6e-92339
NC_008639:1573971:1592170159217015958353666Chlorobium phaeobacteroides DSM 266, complete genomeexodeoxyribonuclease V, beta subunit4e-88327
NC_014924:3334386:3354099335409933577163618Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeexodeoxyribonuclease V, beta subunit1e-76289
NC_017271:4852351:4873729487372948776823954Xanthomonas campestris pv. raphani 756C chromosome, completeexodeoxyribonuclease V subunit beta1e-63246
NC_007086:5064053:5081732508173250858504119Xanthomonas campestris pv. campestris str. 8004, complete genomeexodeoxyribonuclease V beta chain2e-63245
NC_010688:4991410:5011365501136550154834119Xanthomonas campestris pv. campestris, complete genomeexodeoxyribonuclease V beta chain9e-63243
NC_003902:4989855:5009047500904750131654119Xanthomonas campestris pv. campestris str. ATCC 33913, completeexodeoxyribonuclease V beta chain1e-62243
NC_008319:962968:9593339593339629713639Synechococcus sp. CC9311, complete genomeexodeoxyribonuclease V, beta subunit1e-53213
NC_009481:1365000:1381620138162013853093690Synechococcus sp. WH 7803 chromosome, complete genomeexodeoxyribonuclease V subunit beta2e-44182
NC_009720:870194:8701948701948735173324Xanthobacter autotrophicus Py2, complete genomeUvrD/REP helicase2e-21105
NC_020453:7826358:7826358782635878296753318Agromonas oligotrophica S58 DNA, complete genomeUvrD/REP helicase3e-20102
NC_014365:2037506:2061168206116820646473480Desulfarculus baarsii DSM 2075 chromosome, complete genomeUvrD/REP helicase4e-1688.2
NC_010725:3315007:3335885333588533390283144Methylobacterium populi BJ001, complete genomeUvrD/REP helicase6e-1584.3
NC_020388:1479568:1527842152784215316603819Natronomonas moolapensis 8.8.11 complete genomeUvrD/REP family helicase9e-1583.6
NC_010368:191920:2037122037122073473636Halobacterium salinarum R1 plasmid PHS3, complete sequenceputative helicase6e-1274.3
NC_009615:1067603:1087220108722010895622343Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase1e-1173.2
NC_018581:2768743:2778553277855327818073255Gordonia sp. KTR9 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)1e-1173.2
NC_017047:2042346:2042926204292620463183393Rahnella aquatilis HX2 chromosome, complete genomeUvrD/REP helicase1e-1173.2
NC_007907:1940000:1958144195814419623224179Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1173.2
NC_014926:795549:7955497955497984252877Thermovibrio ammonificans HB-1 chromosome, complete genomeUvrD/REP helicase2e-1172
NC_015161:927152:9336859336859359882304Deinococcus proteolyticus MRP chromosome, complete genomeUvrD/REP helicase6e-1170.9
NC_020210:2133996:2174276217427621763362061Geobacillus sp. GHH01, complete genomeDNA/RNA helicase1e-1069.7
NC_014033:1152994:1154615115461511570442430Prevotella ruminicola 23 chromosome, complete genomeputative ATP-dependent DNA helicase PcrA2e-1069.3
NC_009621:389181:4008564008564040113156Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequenceUvrD/REP helicase2e-1069.3
NC_009051:1455183:1496202149620214994443243Methanoculleus marisnigri JR1, complete genomeUvrD/REP helicase3e-1068.6
NC_015388:269301:2693012693012727143414Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeUvrD/REP helicase5e-1067.8
NC_010003:795355:8349168349168370362121Petrotoga mobilis SJ95, complete genomeUvrD/REP helicase6e-1067.4
NC_008536:2079052:2107542210754221097912250Solibacter usitatus Ellin6076, complete genomeUvrD/REP helicase8e-1067
NC_007907:5185510:5268982526898252707661785Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0966.6
NC_015067:1528984:1554473155447315585884116Bifidobacterium longum subsp. longum JCM 1217, complete genomeATP-dependent nuclease subunit A1e-0966.6
NC_013223:2279869:2304961230496123071052145Desulfohalobium retbaense DSM 5692, complete genomeUvrD/REP helicase1e-0966.2
NC_014315:2239725:2236289223628922397323444Nitrosococcus watsoni C-113 chromosome, complete genomeUvrD/REP helicase2e-0965.9
NC_010322:4623867:4641198464119846428351638Pseudomonas putida GB-1 chromosome, complete genomeUvrD/REP helicase3e-0965.1
NC_012811:317308:3394763394763414762001Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative ATP-dependent DNA helicase4e-0965.1
NC_011830:3025437:3043677304367730478554179Desulfitobacterium hafniense DCB-2, complete genomerecombination helicase AddA4e-0965.1
NC_015508:296856:3134503134503166353186Agrobacterium sp. H13-3 chromosome linear, complete sequenceexodeoxyribonuclease V subunit beta7e-0963.9
NC_007519:3527207:3527207352720735293662160Desulfovibrio alaskensis G20 chromosome, complete genomeATP-dependent DNA helicase UvrD1e-0863.2
NC_015578:2428500:2432809243280924359673159Treponema primitia ZAS-2 chromosome, complete genomeputative UvrD/REP helicase2e-0862.8
NC_013410:2179342:2189179218917921924633285Fibrobacter succinogenes subsp. succinogenes S85 chromosome,UvrD/REP helicase2e-0862.8
NC_003228:2973266:2979834297983429821942361Bacteroides fragilis NCTC 9343, complete genomeputative helicase2e-0862.8
NC_016776:2956444:2997159299715929995192361Bacteroides fragilis 638R, complete genomeputative helicase2e-0862.4
NC_006347:2899653:2906221290622129085812361Bacteroides fragilis YCH46, complete genomeATP-dependent DNA helicase2e-0862.4
NC_009465:90000:9221992219953893171Candidatus Vesicomyosocius okutanii HA, complete genomeATP-dependent DNA helicase4e-0861.6
NC_010102:997417:1014640101464010180233384Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-0861.2
NC_014837:1144500:1151150115115011545423393Pantoea sp. At-9b chromosome, complete genomeUvrD/REP helicase6e-0861.2
NC_015859:1069116:1089451108945110925733123Corynebacterium variabile DSM 44702 chromosome, complete genomeATP-dependent DNA helicase II6e-0860.8
NC_019814:320260:3202603202603236193360Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonashypothetical protein7e-0860.8
NC_018012:3102215:3126846312684631290172172Thiocystis violascens DSM 198 chromosome, complete genomeDNA/RNA helicase8e-0860.5
NC_011059:2478075:2488075248807524910292955Prosthecochloris aestuarii DSM 271, complete genomeUvrD/REP helicase1e-0760.1
NC_014408:806720:8331098331098358652757Methanothermobacter marburgensis str. Marburg chromosome, completeATP-dependent DNA helicase1e-0760.1
NC_019815:761480:7794157794157827743360Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiUvrD/Rep helicase family protein 22e-0759.3
NC_003552:2634828:2646157264615726479951839Methanosarcina acetivorans C2A, complete genomeDNA helicase2e-0759.3
NC_012796:4693500:4707295470729547091481854Desulfovibrio magneticus RS-1, complete genomeATP-dependent DNA helicase3e-0758.9
NC_007604:1183497:1186081118608111892663186Synechococcus elongatus PCC 7942, complete genomehypothetical protein2e-0758.9
NC_006576:414696:4315394315394347243186Synechococcus elongatus PCC 6301, complete genomehypothetical protein2e-0758.9
NC_002505:168532:1942141942141963852172Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA helicase II2e-0758.9
NC_012668:442601:4426014426014447722172Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA-dependent helicase II2e-0758.9
NC_016445:2593800:2619482261948226216532172Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA-dependent helicase II2e-0758.9
NC_016944:168530:1942241942241963952172Vibrio cholerae IEC224 chromosome I, complete sequenceDNA-dependent helicase II2e-0758.9
NC_014973:243000:2582002582002603922193Geobacter sp. M18 chromosome, complete genomeUvrD/REP helicase3e-0758.5
NC_009785:1443500:1456866145686614605163651Streptococcus gordonii str. Challis substr. CH1, complete genomefirst chain of major exonuclease RexA5e-0758.2
NC_014731:296000:3072753072753108173543Halogeometricum borinquense DSM 11551 plasmid pHBOR02, completeDNA/RNA helicase, superfamily I4e-0758.2
NC_014974:1539950:1545650154565015475151866Thermus scotoductus SA-01 chromosome, complete genomeATP-dependent DNA helicase PcrA4e-0758.2
NC_014376:1842290:1845537184553718478252289Clostridium saccharolyticum WM1 chromosome, complete genomeUvrD/REP helicase6e-0757.8
NC_012796:4693500:4738098473809847399721875Desulfovibrio magneticus RS-1, complete genomeATP-dependent DNA helicase7e-0757.4
NC_012796:2041579:2051898205189820537721875Desulfovibrio magneticus RS-1, complete genomeATP-dependent DNA helicase9e-0757
NC_008536:33776:4416344163474293267Solibacter usitatus Ellin6076, complete genomeUvrD/REP helicase1e-0657
NC_006672:6000:2014120141221892049Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceDNA helicase II UvrD1e-0656.6
NC_017062:547317:5481925481925501561965Rickettsia typhi str. B9991CWPP chromosome, complete genomeDNA helicase II1e-0656.6
NC_008463:2467219:2480409248040924855325124Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative DNA helicase1e-0656.6
NC_014098:2225174:2258626225862622608482223Bacillus tusciae DSM 2912 chromosome, complete genomeUvrD/REP helicase2e-0656.2
NC_020063:1194000:1201945120194512071015157Enterobacteriaceae bacterium strain FGI 57, complete genomeATP-dependent DNA helicase, RecQ family2e-0655.8
NC_007760:3655433:3675980367598036777551776Anaeromyxobacter dehalogenans 2CP-C, complete genomeUvrD/REP helicase2e-0655.8
NC_007644:2099878:2099878209987821020672190Moorella thermoacetica ATCC 39073, complete genomeATP-dependent DNA helicase PcrA2e-0655.8
NC_014831:329983:3299833299833323582376Thermaerobacter marianensis DSM 12885 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-0655.8
NC_009484:857384:8840898840898860081920Acidiphilium cryptum JF-5 chromosome, complete genomeUvrD/REP helicase3e-0655.5
NC_010682:1593108:1604302160430216060231722Ralstonia pickettii 12J chromosome 1, complete sequenceUvrD/REP helicase3e-0655.5
NC_009429:401500:4116594116594135121854Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein6e-0654.3
NC_007644:469181:4920174920174962344218Moorella thermoacetica ATCC 39073, complete genomeUvrD/REP helicase7e-0653.9
NC_010655:1160384:1160384116038411623902007Akkermansia muciniphila ATCC BAA-835, complete genomeUvrD/REP helicase9e-0653.5